Bradyrhizobium oligotrophicum: S58_37330
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Entry
S58_37330 CDS
T02484
Name
(GenBank) putative single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aol
Bradyrhizobium oligotrophicum
Pathway
aol03410
Base excision repair
aol03430
Mismatch repair
aol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
S58_37330
03430 Mismatch repair
S58_37330
03440 Homologous recombination
S58_37330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aol03400
]
S58_37330
DNA repair and recombination proteins [BR:
aol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
S58_37330
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
S58_37330
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
S58_37330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAM89726
UniProt:
M4Z8Z1
LinkDB
All DBs
Position
4257752..4259593
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AA seq
613 aa
AA seq
DB search
MAPSALALPLSAPPAFLGVRLSLTNKLWRDRLDARGAARALAIVQRHQLPEMLARVLAGR
DVGIEEVNDFLDPTIRKMMPDPFTVTQMEAAAQRIADAAMKGEKVAIFGDYDVDGATSAA
LLAWHLRHCGLDPLIHIPDRIFEGYGPNVEAIRALAAKGATLLVTVDCGTTSLEPLGEAR
RLGMSVVVIDHHQCGEELPEVDALVNPNRPDDLSGLGYLAAVGLTLVTLVAVNRELRGRG
FWSSTRPEPDLLSMLHHVALGTVADVAPLIALNRAFVAKGLIALRRRDHVGHTALMDVAR
LNGPPEAWHLGFMLGPRINAGGRIGRADLGVRLLLESDVSEAARIAAELDRLNSERRVIE
QHAEAQAEAEALASLGLEDKGAVIVTASEGWHPGVVGLVASRLKEKFARPAFAIALEPGG
IGTGSGRSIPGVDLGKAVRHAVEQGILMKGGGHAMAAGVTLRKERLAEFRAYLESALAAD
VADARHVNEILIDGAISARAATPELVATLNRAGPFGSGNPEPIVALPSHQLVYADEVGQA
HLKLRFKSGDGATVNAIAFRSVGQKLGNALVQHRGDILHVAGTLTVDRYQGVERVQLRVL
DVAVPDHGPATIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatccgcccttgcactgcccctgagcgccccgccggcgttcctcggcgtgcgg
ctttcgctgaccaataaattgtggcgcgaccgcctggatgcgcggggcgcggcgcgggcg
ctcgccatcgtgcagcgccatcagctgccggagatgctggcgcgggtgctcgccgggcgt
gacgtcgggatcgaggaggtcaacgacttcctcgaccccaccatccgcaagatgatgccg
gatccgttcacggtgacgcagatggaggcggccgcccagcgcatcgccgatgccgcgatg
aagggcgagaaggtcgcgatcttcggcgactacgacgtcgacggcgcgacgtcggcggcg
ctgctcgcctggcacctgcgccattgcgggctcgatccgctgatccacattcccgaccgc
atcttcgaaggctacgggccgaacgtcgaggccatccgcgcgctcgcggccaagggcgcg
actttgctcgtcactgtcgactgtggcaccaccagcctcgagccgctgggggaggcgcgg
cggctcggcatgtccgtggtcgtgatcgaccaccatcaatgcggcgaggagcttccggag
gttgacgcgctggtgaatccgaaccggcccgacgatctctccggcctcggctatctcgcc
gccgtcgggctgacgctggttacgctggtcgcggtcaatcgcgagctgcgcggccgcggc
ttctggagcagcacccggcctgagccggatctgctctccatgctgcatcacgtcgcgctc
ggcaccgtcgccgacgtcgcgccgctgatcgcactcaaccgcgccttcgtcgccaagggc
ctgatcgcgctgcgccggcgcgaccatgtcgggcacaccgcactgatggatgtggcgcgc
ctcaacggtccgccggaggcctggcatctcggcttcatgctcgggccgcgcatcaatgcc
ggcggccgcatcggccgcgccgatctcggcgtgcggctgctgctggagagcgacgtctcg
gaagccgcgcgcatcgcggccgagctcgaccggctcaacagcgagcgccgcgtgatcgag
cagcacgccgaggcgcaggcggaggccgaggcgctggcctcgctcgggctggaggacaag
ggcgccgtcatcgtcaccgcgtcggaaggctggcatcctggcgtcgtcggcctggtcgcc
tcgcggctgaaggaaaagtttgcgcgtcccgcctttgcgatcgcgctcgaaccgggcggc
atcggcaccggatcgggccgctccatccccggcgtcgatctcggcaaggccgtgcgccac
gcggtggagcagggcatcctgatgaagggcggcgggcacgcgatggccgccggcgtcacc
ctgcgcaaagagcggctggcggagtttcgcgcctatctggaaagcgcgctcgcggctgac
gtcgccgatgcgcgccacgtcaacgagatcctgatcgacggcgccatcagcgcgcgtgcg
gcaacgccggagctggtcgcgacgctcaatcgcgccggtcccttcggcagcggcaatccc
gagccgatcgtggcgctgccgtcgcatcaattggtctatgccgacgaggtcgggcaggcg
catctcaagctgcgcttcaagtccggcgacggcgccaccgtcaacgccatcgcgttccgc
tccgtcggccagaagctcggcaatgcgctggttcagcatcgcggcgacatcctgcatgtc
gccggcaccctcaccgtcgaccgctaccagggcgtcgagcgcgtgcagttgcgcgtgctg
gatgtggccgtgccggaccatgggccggcgacgatcaggtag
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