Bradyrhizobium oligotrophicum: S58_42420
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Entry
S58_42420 CDS
T02484
Name
(GenBank) putative protein superfamily II DNA/RNA helicase domain
Organism
aol
Bradyrhizobium oligotrophicum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
BAM90228
UniProt:
M4Z938
LinkDB
All DBs
Position
complement(4822335..4825637)
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AA seq
1100 aa
AA seq
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MPLPFKKPRDVRAFFSHAAFQKAELLQISGSVADLDISEDGRELAASVQGSQAWAYDVEI
LLKPDKHGRVNVSGECSCPMRHNCKHVAAVLLEAIEQSSDMGPVETWPAKTAAAAKAKPL
VLPPEIVSWLAKIGTVSRGDTYPAEVRQRLIYGVRVHTEAGQAPFPVALVWSVRLRKDDS
FADVFSKVDNVGGGAERAPAFYRDSDIEILAHLGGQAYVGNMWAHRIGSAALMKRIVETG
RAYWHDHTGPLLRWGDKRSGRIEWQPVGRRGIGARLVVDGVLALHAEAPVYADETLGIVG
EVDPGIAPRTAHHLLSAPVVPSVLIGEVSRHLSRRLPSLDPAHLPAPPTEVVKIEAKPAP
ILRLLRGPYPGYGFRGEHGSGLPLGAVRLGFRYGPIEIDGSGSGAEVEAFHDGRVHLVTR
AKADERKASKLLTELGLVPLRKVQTYNYGGHAGDLTFEDEGRWLQFVHLELGALHEQGFE
IRIDDDFPYRLAESSGLVDMEIEGSGIDWFEFGFKIDVDGRPHDLAELLARLLAQPGILD
ALADADADAKHMYVPLPDGRHLALAAGRFLPVLLALQTMRLSGGAFDKSGKIKLSRAQLV
PLLAHDPGAFKGPDDLRRLADLVRQHRQDELKLPAGFTATLRPYQQQGVAWLDLLRQADL
GGVLADDMGLGKTVQVLALLALEKARGALTTPVLIVAPTSLMTNWFNEARKFVPELKVLV
FHGAARKELIAQISEYDVVLTTYPLIARDHELILGRDWHMAILDEAQTIKNPNAATTRWL
GAIKASHRFCLTGTPMENHLGELWSIMSFVNPGYLGDKTAFARNWRTPVEKEGNKMRAAA
LTRRVKPFLLRRTKEEVASELPAKIDIVETVEIDGKQRDLYDSIRAAMATKVRKALEERG
LARSHIIVLEALLRLRQVCCDPRLVKLDKIERPSAKLDRLMEMVEELLSEGRKIIIFSQF
TSMLALIEERFEAADIRYELLTGETRDRKHAIEAFQNGDSPVSLISLKAGGVGLNLTAAD
TVIIYDPWWNPAVEAQAIDRAHRIGQDKKVFVYRLVTAGTIEEKIGELKLRKQALADSLF
DCEGNIGKALTEDDIAALLS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttccgttcaaaaagccccgggacgttcgtgccttcttcagccacgccgccttt
cagaaggcggagcttctgcagatcagcggaagcgttgccgatctcgatatcagcgaggac
ggtcgcgagctggctgcctccgtgcaggggtcgcaggcatgggcctacgacgtcgagatc
ctgctgaagcccgacaagcacggccgcgtcaacgtctccggtgaatgctcctgcccgatg
aggcacaactgcaagcatgtcgcggcggtgttgctcgaagccatcgagcaatcgtcggac
atgggcccggtcgagacgtggccggccaagaccgctgccgcagccaaggcgaagccgctg
gtgctgccgccggagatcgtctcctggctggccaagatcggcacggtcagccgcggcgat
acgtacccggccgaggtgaggcaaaggctgatctacggcgtgcgggttcacacggaggcg
gggcaggcaccgtttccggtcgcgttggtgtggtcggtgagattgcgcaaggacgacagc
ttcgccgacgtgttttcgaaagtcgacaacgtggggggcggcgcggagcgggcgccggcg
ttctatcgcgacagcgacatcgagattctggcgcatcttggcggacaggcttatgtcggc
aacatgtgggcgcaccggatcggctcggccgcgctgatgaagcggatcgtcgaaaccgga
agggcctattggcacgaccacaccgggccgctgttgcgctggggcgacaagcgcagcggc
cgcatcgaatggcagccggtcgggcggagggggatcggtgcacggctcgtcgttgacgga
gtccttgcgctgcatgccgaggcgcccgtctatgccgacgagacgctcggcatcgtcggc
gaggtcgatcccgggattgcaccgcgcacggcacaccacttgctgagcgcgccggtggtg
ccatcggtgctgatcggtgaagtcagccgccatctcagccggcgtttgccgtcgctcgat
ccggctcatcttccggcgccaccgaccgaggtcgtcaagatcgaagccaagcccgcgccg
atcctgcgcctgttgcgcggaccctatcccggctacggctttcgcggtgagcatggcagc
gggcttccgctcggcgcggtccggctcggcttccgctacgggccgatcgagatcgacggc
tccggcagcggcgccgaggtcgaggcattccacgacggccgggtgcatctcgtcacgcgc
gccaaggccgacgagcgaaaggcatccaagctgctgaccgagctcggcctcgttccgctc
aggaaagtccagacctacaattatggaggtcatgccggcgacctgaccttcgaggatgag
ggccgctggctgcagttcgtccatctcgagctcggcgcattgcacgagcaggggttcgag
atccgcatcgacgacgattttccgtatcggctggcggagtcctccggtctcgtcgacatg
gagatcgagggctccggaatcgactggttcgagttcggcttcaagatcgacgtcgatggc
cggccgcatgacctcgccgagttgctggctcgtctactcgcgcaacccggaatcctcgac
gcgctggctgacgccgatgctgatgccaagcacatgtatgtgccgctgcctgacggccgg
catctggcgctggcggccggccgtttcctgccggtcctgctggcgctgcagacgatgcgg
ctgagcggcggcgccttcgacaagtccggcaagatcaagctgtcccgtgcccagctcgtg
ccgctgctggcgcacgatccgggcgcgttcaaaggacccgacgatctgcgccggctcgcg
gatctggtgcggcagcatcggcaggatgaattgaagctgcccgccggcttcaccgccacg
ctgcgcccctatcagcagcagggcgtcgcctggctcgatctcctgcggcaggccgatctc
ggcggcgtcctcgcagacgacatgggtctcggcaagaccgtccaggtgttggcccttctg
gcgctggagaaggcgcgcggcgcgctgacgacgccggtgctgatcgtcgcgccgaccagc
ctgatgacgaactggttcaacgaggcccgcaaattcgttcccgagctgaaggtcctggtg
ttccacggcgctgctcgcaaggagctgatcgcgcagatttcggagtacgatgtcgtgctc
accacctatccgctgatcgcgcgcgaccatgagctcatcctcggacgcgactggcacatg
gccattctcgacgaggcgcagaccatcaagaatcccaatgccgccacgacgcgatggctc
ggtgcgatcaaggccagccatcgcttctgcctcacgggcacgccgatggagaaccatctc
ggcgaactctggtcgatcatgagtttcgtcaacccgggctatctcggcgacaagaccgcg
ttcgcgcgcaactggcgcacgccggtcgagaaggagggcaacaagatgcgggcggcggcg
ctgacccgccgcgtcaagccgttcctgctgcgtcggaccaaggaagaggtcgcgtccgag
ctgccggccaagatcgacatcgtggagaccgtggaaatcgacggcaagcagcgcgacctc
tatgattcgatccgcgcggcgatggcgacgaaggtgcgcaaggcgctcgaagagcgcggt
cttgcccgcagccacatcatcgtgctcgaagcgctgctgcgcctgcgccaggtctgctgc
gatccgcgtctggtgaagctcgacaagatcgagcggccctcggccaagctcgaccggctg
atggagatggtcgaggaactgctcagcgaggggcgcaagatcatcatcttctcgcagttc
acctcgatgctcgcgctgatcgaggaacgtttcgaggcggcggacatccgctacgagctc
ctgaccggcgagacgcgcgatcgcaagcatgcgatcgaggcgttccagaacggagatagt
cctgtgtccctgatcagcctcaaggccggcggcgtcggtctgaacctgacggcagccgac
accgtcattatctacgacccctggtggaatcccgccgtcgaggcgcaggcgatcgaccgc
gcccaccgcatcggccaggacaagaaggtgttcgtgtatcgcctcgtgaccgccggcacg
atcgaggagaagatcggcgagctgaagctgcgcaagcaggcactggccgattcactgttc
gattgcgagggcaatatcggcaaggcgctcaccgaggacgatatcgccgctctgctgtcg
tga
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