Bradyrhizobium oligotrophicum: S58_45140
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Entry
S58_45140 CDS
T02484
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aol
Bradyrhizobium oligotrophicum
Pathway
aol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
S58_45140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aol03021
]
S58_45140
03400 DNA repair and recombination proteins [BR:
aol03400
]
S58_45140
Enzymes [BR:
aol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
S58_45140
Transcription machinery [BR:
aol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
S58_45140
DNA repair and recombination proteins [BR:
aol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
S58_45140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
BAM90499
UniProt:
M4Z9W0
LinkDB
All DBs
Position
complement(5125032..5126063)
Genome browser
AA seq
343 aa
AA seq
DB search
MGETVTIQKNWQELIRPNKLQVTPGSDATRFATVVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDIAIKMQGEGPKRMVVKKQGPGAVTA
GDIQTVGDIVVLNPDLPLCTLDEGAEIRMEFTVATGKGYVAADRNRPEDAPIGLIPVDSL
FSPVRKVSYKVENTREGQILDYDKLTMTIETNGAISPEDAVAYAARILQDQLNVFVNFEE
PRKEVAQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacagtgacgatccagaagaattggcaagaattgattcggccgaacaagctc
caggtcacgccgggctccgacgcgacccgtttcgccaccgtggttgccgagccgctggag
cgcggcttcggccagacgctcggcaatgcgctccgccgcatcctgctgtcgtcgctgcag
ggcgccgctgtgcagtcggtgcacatcgatggcgtgctgcatgagttctcctcgatcgcc
ggtgtccgcgaggacgtcaccgacatcgtgctgaacatcaaggacatcgcgatcaagatg
cagggcgaaggcccgaagcgcatggtcgtgaagaagcagggtccgggtgccgtcaccgcc
ggtgacatccagaccgtcggcgacatcgtcgtgctcaaccccgacctgccgctctgcacc
ctggacgagggcgcagagatccgcatggagttcacggtcgcgaccggcaagggctacgtc
gccgccgatcgcaaccgccccgaggatgcgccgatcggcctgatcccggtcgacagcctg
ttctcgccggtccgcaaggtctcctacaaggtcgagaacacccgcgagggccagatcctc
gactacgacaagctgaccatgacgatcgagaccaacggcgcgatctcgccggaagacgcg
gtggcctatgccgcccgcatcctgcaggatcagctcaacgtcttcgtcaacttcgaagag
ccgcgcaaggaagtcgcccaggagatcatcccggacctcgccttcaacccggccttcctc
aagaaggtggacgagctcgagctgtcggtgcgttcggcgaactgcctgaagaacgacaac
atcgtctatatcggcgacctcgtgcagaagtcggaggcggagatgctgcgcaccccgaac
ttcggccgcaagtcgctgaacgagatcaaggaagtgctggcccagatgggtctgcatctc
ggcatggaagtgccgggctggccgccggagaacatcgacgagctggccaagcgcttcgag
gatcattactga
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