Bradyrhizobium oligotrophicum: S58_45470
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Entry
S58_45470 CDS
T02484
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aol
Bradyrhizobium oligotrophicum
Pathway
aol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
S58_45470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aol03021
]
S58_45470
03400 DNA repair and recombination proteins [BR:
aol03400
]
S58_45470
Enzymes [BR:
aol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
S58_45470
Transcription machinery [BR:
aol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
S58_45470
DNA repair and recombination proteins [BR:
aol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
S58_45470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
ApbA_C
DUF2130
Motif
Other DBs
NCBI-ProteinID:
BAM90532
UniProt:
M4ZAC4
LinkDB
All DBs
Position
complement(5150413..5154612)
Genome browser
AA seq
1399 aa
AA seq
DB search
MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA
MIGAEAIRELLRGLELEKLEQTLRAEMQETDSDIKHKKLAKRLKIVEAFRHSGNKPEWMI
MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSIMREGMHGEGMKFGNMAELEHALH
AKVIHLHSKIKYRWEGMDETGKISKRWIETTAGRVMLGNVLPRHTRISYELINKLMTKRE
ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHGKWKIVDTTRTL
AKDFEQQYNDGLITHGEKYNKVVDAWSKATEEIAKEMMKEISSTKKTAKGADADINSIYM
MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIITQDDCGTHLGIKMRAIIDAGTVVASLGSRILGRVP
CDDVRDPSSNAVVVKAGTLMEESHIDAIQQAGVQEVKIRSALTCELVNGICKMCYGRDLA
RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNFEGKVVIKNKAI
ARNSEGHLIAMVRNMVVTIVDPDGTERATHRIQYGSRMHVDDGDMIKRGQRIAEWDPYSR
PILTEAEGTIGFEDLTEGLSISETLDESTGIAKRVVIDWRSTRGGADLRPAIVIKGKDGK
VLKLARGGDARYMLSVDAILSVDIGSTVKSGDILARISTESAKTRDITGGLPRVAELFEA
RKPKDAAIIAEIAGTIRFGRDYKNKRRISIEPMDKTEEAREYLIPKGKHIHLQDGDIVEK
GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKIEV
TDQGDTDMISGEQVDKIEFDLLNAKALEEAKKPATGTPVLLGITKASLQTRSFFSAASFQ
ETTRVLTEAAVNGKIDPLEGLKENVIVGRLIPAGTGASMARIREVALKRDKLILDEREKQ
AAIVPAQPEPQPLALPPAE
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaaattatgaatctcttcaatccgacgacgccggctcaggtcttcgaccag
atccggatctcgattgcgtcgccagagaagattctgtcctggtcctacggcgagatcaag
aagccggaaacgatcaactaccgtaccttcaagcccgagcgcgacggcctgttctgcgcc
cgcatcttcgggccgatcaaggactacgagtgcttgtgcggcaagtacaagcggatgaag
tacaagggcatcatctgcgagaagtgctcggttgaggtgaccttgtcgcgcgtccggcgc
gagcgcatgggtcatatcgagctcgcagctcccgtcgcgcacatctggttcttgaaatcg
ctgccgtcgcgcatcggcctgttgctcgacatgacgctgaaggatctcgagcggatcctg
tatttcgaatattacgtcgtcctcgaaccgggtctcaccgcgctcaaggaccgtcagctg
ctgtccgaggacgagtacctcaaggcgcaggacgagtacggccaggacagcttcaccgcc
atgatcggcgcggaagccatccgtgagctgctgcgcggcctcgagctggagaagctcgag
cagacgctgcgtgccgagatgcaggagaccgactccgacatcaagcacaagaagctcgcc
aagcgcctgaagatcgtcgaggcgttccgccactccggcaacaagccggaatggatgatc
atgaccgtggtgccggtgatcccgccggatctgcggccgctggtgccgctcgacggcggc
cgcttcgcgacctccgatctcaacgacctctatcgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatggagctgcgcgcgcccgacatcatcatccgcaacgaaaagcgcatg
ctgcaggaggccgtcgacgcgctgttcgacaacggccgccgcggccgcgtcatcaccggc
gccaacaagcgtccgttgaagtcgctcgccgacatgctgaagggcaagcagggccgcttc
cgtcagaacctgctcggcaagcgcgtcgactattccggccgttcggtcatcgtcgtcggt
ccggagctgcgcctgcatcagtgcggcctgccgaagaagatggcgctcgagctgttcaag
ccgttcatctattcgcggctcgacgccaagggcctgtcgacgacggtcaagcaggccaag
aagctggtcgaaaaggagcgtccggaggtctgggacatcctggacgaggtcatccgcgag
catccggtgctcctgaaccgcgccccgaccttgcatcgcctgggcattcaggcgttcgag
ccggtgctgatcgagggcaaggcgatccagctgcatccgctggtctgctcggccttcaac
gccgacttcgacggcgaccagatggccgtgcacgtcccgctgtcgctcgaggcgcagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgcatccggccaacggtcagccg
atcatcgtgccgtcgcaggacatcgtgctcgggctgtactacctctcgatcatgcgcgag
ggcatgcacggcgagggcatgaagttcggcaacatggccgagctcgagcacgcgctgcat
gccaaggtcatccacctccacagcaagatcaagtaccgctgggaaggcatggacgagacc
ggcaagatctccaagcgctggatcgagaccacggccggccgcgtcatgctcggcaacgtg
ctgccgcgtcacacgcgcatttcgtacgagctcatcaacaagctgatgaccaagcgcgaa
atctcgggcgtgatcgatcaggtctaccgccactgcggccagaaggagacggtgatcttc
tgcgaccgcatcatggcgctcggcttctacaacgccttcaaggctggcatctcgttcggc
aaggacgacatggtcgtgccgcacggcaagtggaagatcgtcgacacgacccgtacgctg
gcgaaggatttcgagcagcagtacaatgacggtctgatcacccatggcgagaagtacaac
aaggtcgtcgacgcctggtcgaaggcgaccgaggaaatcgccaaggagatgatgaaggag
atctcttcgaccaagaagacggcgaagggcgcggatgccgacatcaactcgatctacatg
atggcccactccggtgcccgtggttcgccggcgcagatgcgccagctcgcgggcatgcgc
ggcctgatggccaagccgtcgggtgagatcatcgagacgccgatcatctcgaacttcaag
gaaggcctctcggttctcgagtacttcaactcgacccacggcgcccgcaagggtctcgcg
gacaccgcgctgaagacggcgaactcgggctacctgacccggcgtctggtcgacgtcgcg
caggactgcatcatcacgcaggacgattgcggcacccatctcggcatcaagatgcgcgcc
atcatcgatgccggcaccgtcgtggcctcgctcggctcgcgcatcctgggccgcgtgccc
tgcgacgacgtgcgcgatccctcgtccaacgccgtggtggtcaaggccggcacgctgatg
gaggagagccacatcgacgccatccagcaggctggcgtgcaggaggtgaagatccgctcg
gcgctcacttgcgagctcgtcaacggcatctgcaagatgtgctacggccgcgacctcgcg
cgcggtacgccggtcaaccacggtgaggctgtcggcgtcatcgccgcgcagtcgatcggt
gagcccggcacccagctgacgatgcgcaccttccacatcggtggtgccgcgcagctgaac
gagcagtccttcgtggagtccaacttcgaaggcaaggtggtcatcaagaacaaggcgatc
gcgcgcaacagcgagggtcacctgatcgcgatggtccgcaacatggtcgtgacgatcgtc
gaccccgacggcaccgagcgtgcgacgcaccgtatccagtacggctcgcgcatgcatgtg
gacgacggcgacatgatcaagcgcggccagcgtatcgcggagtgggatccctacagccgt
ccgatcctcaccgaagccgagggcacgatcggtttcgaggacctcaccgagggcctgtcg
atctcggaaacgctcgacgagtcgaccggcatcgccaagcgcgttgtcatcgactggcgc
agcacgcgcggtggcgcggacctgcgtccggcgatcgtgatcaagggcaaggacggtaag
gtgctcaagctcgcccgcggcggcgatgcccgctacatgctgtcggtcgacgcgattctc
tcggtcgacatcgggtcgacggtgaagtcgggtgacatcctggcgcgtatctcgaccgag
agcgccaagacgcgcgacatcaccggcggtctgccgcgggtggcggaactgttcgaagcg
cgcaagccgaaggatgccgcgatcatcgccgagatcgccggcaccatccggttcggacgc
gactacaagaacaagcgtcgcatctcgatcgagccgatggacaagacggaggaggcgcgc
gagtacctcatcccgaagggcaagcacatccatctgcaggatggcgacatcgtcgagaag
ggtgacttcatcgtcgaaggcaacccggcgccgcacgacatcctggcgatcaagggcatc
gaggagctcgcggcctatctggtcaacgagatccaggaggtctaccggctgcagggcgtg
ctcatcaacgacaagcacatcgaggtgattgtccgtcagatgctgcagaagatcgaggtc
accgaccagggcgacaccgacatgatttcgggcgaacaggtcgacaagatcgagttcgat
ctgctcaacgcgaaggcgctggaggaggcgaagaagcccgccaccggcaccccggttctg
ctcggcatcaccaaggcgagcctgcagacgcggtcgttcttctcggcggcctcgttccag
gagaccacccgcgtcctcaccgaggcggcggtcaacggcaagatcgatccgctcgagggt
ctcaaggagaacgtcatcgtcggccgtcttatcccggccggcaccggcgcctcgatggcc
cgcatccgcgaagtcgcattgaagcgcgacaagctgattctcgacgagcgcgagaagcag
gcggcgatcgtgccggcgcagcccgagcctcagccgctggcgctgccgccggccgagtaa
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integrated database retrieval system
