Aquabacterium olei: DEH84_00855
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Entry
DEH84_00855 CDS
T05429
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aon
Aquabacterium olei
Pathway
aon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DEH84_00855 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aon03021
]
DEH84_00855 (rpoC)
03400 DNA repair and recombination proteins [BR:
aon03400
]
DEH84_00855 (rpoC)
Enzymes [BR:
aon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DEH84_00855 (rpoC)
Transcription machinery [BR:
aon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DEH84_00855 (rpoC)
DNA repair and recombination proteins [BR:
aon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DEH84_00855 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AWI52156
UniProt:
A0A2U8FP96
LinkDB
All DBs
Position
201139..205383
Genome browser
AA seq
1414 aa
AA seq
DB search
MKGLLDLFKQFTPDEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIELAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVVDPGMTPLKKFSIMSEDDYDAKRREFGDEFEALM
GAEGIQKLLAEMDLDVEIDKLRNDMTGSELKVKKNSKRLKVMEAFKKSGIKPNWMVLEVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLARLLELKAPEIIVRNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLK
LHQCGLPKLMALELFKPFIFARLEAMGIATTIKAAKKEVESGTPVVWDILEEVIKEHPVM
LNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEART
LMLASNNVLFPANGEPSIVPSQDVVLGLYYATRERINGKGEGMVFSDLAELQRALDNGVV
EITAQINVRLTEYTKDKETGEFVPETKLVATTVGRALLSEILPKGLPFANINKALKKKEI
SKLINTSFRKCGLKETVVLADKLLQSGFRLATRAGISIGIDDMLVPKQKYELIERAEKEV
KEIEQQYVSGLVTAGERYNKVVDIWGKTGDEVGKVMMSQLSKQKTIDRNGNEVDQESFNS
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVTTEDCGTDQGINTRALVEGGEVIESLRDRILG
RVPAIDVLHPETQQVVISAGQMLDEDALDLLEAAGVDEVKVRTPLTCATRFGLCAKCYGR
DLGRGGLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSDGIIGFN
ATMRYVTNGKGELVVISRSGEIVITDPHGRERERHKVPYGAILTVKADQTIKAGTVLANW
DPLTRPIITEFAGQAKFENVEEGVTVAKQVDEVTGLSTLVVIDPKRRGAAKVVRPQVKLL
DASGAEVKIPGTDHAVTIGFQVGALIQIRDGQDLSPGEVLARIPIEGQKTRDITGGLPRV
AELFEARSPKDKGALAEITGTVSFGKETKGKVRLQITDPDGKVWEDLVPKEKNILVHEGQ
VVNKGESIVDGPADPQDILRLLGIEELARYIVDEVQDVYRLQGVKINDKHIQVIVRQMLR
RVQIVNPGDTHYIAGEQVERSELLDTNDRMRAEGKMIATHSDVLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAFHQARKAKEEMDDTERRA
IAMQEAQERAAMELAALEETTDAAPAEGGETAAE
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtttgctggacctgttcaagcaattcacgcccgatgagcatttcgatgcgatc
aagatcgggctggcctcgcccgagaagatccgctcgtggtctttcggcgaggtgaagaag
cctgagacgatcaactaccgcacgttcaaacccgagcgtgacggcctgttctgcgccaag
atcttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgtctgaagcac
cgcggcgtgatctgcgagaagtgcggcgtcgaagtgacccagacgaaggttcgccgtgac
cgcatgggtcacatcgagctggctgcgccgtgcgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcctggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcgtacgtggtggtggacccgggcatgaccccgctgaagaagttcagcatcatg
tccgaggacgactacgacgcgaagcgccgtgagttcggtgatgaattcgaggccctgatg
ggcgccgaaggcatccagaagctgctggccgagatggaccttgacgtcgagatcgacaag
ctgcgcaacgacatgaccggcagcgagctgaaggtcaagaagaactcgaagcgcctgaag
gtcatggaggccttcaagaagtcgggcatcaagcccaactggatggtgctggaagtcctg
cccgtgctgccgccggacctgcgtccgctggtgccgctggacggcggtcgtttcgcgacc
tccgacctgaacgacctgtatcgccgcgtcatcaaccggaacaaccgtctggctcgcctg
ctcgagctgaaggccccggaaatcatcgtgcgcaacgaaaagcgcatgctgcaggaagcc
gtcgactcgctgctcgacaacggccgccgcggcaaggccatgacgggcgccaacaagcgc
gccctgaagtcgctggccgacatgatcaagggcaagtcgggtcgcttccgtcagaacctg
ctgggcaagcgcgtcgactactccggtcgttcggtgatcaccgtgggcccgaccctgaag
ctgcaccagtgcggtctgcccaagctgatggcgctggagctgttcaagcccttcatcttc
gcgcgcctggaagccatgggcatcgcgaccacgatcaaggccgcgaagaaggaagtcgaa
tccggcacgccggtggtctgggacatccttgaagaagtgatcaaggaacacccggtgatg
ctgaaccgtgcgcccacgctgcaccgtctcggcatccaggcgttcgagcccgtgctgatc
gaaggcaaggccatccagctgcacccgctggtctgcgcggccttcaacgccgacttcgac
ggtgaccagatggccgttcacgtgccgctgtcgatcgaagcccagatggaagcccgcacg
ctgatgctggcctccaacaacgtgctgttcccggccaacggcgaaccgtcgatcgtgccg
tcgcaggacgtggtgctgggcctgtactacgccacccgcgagcgcatcaacggcaagggc
gaaggcatggtcttctccgacctggccgagttgcagcgtgcgctggacaacggcgtggtc
gagatcaccgcccagatcaacgtgcgcctgaccgagtacacgaaggacaaggaaacgggc
gagttcgtccccgagaccaagctcgtggcgaccacggtcggccgcgcgctgctgtccgag
atcctgccgaagggcctgccttttgccaacatcaacaaggcgctcaagaagaaggaaatc
tccaagctcatcaacacctcgttccgcaagtgcggtctgaaggaaaccgtggtgctggcc
gacaagctgctgcaaagcggtttccgtctggccacgcgcgccggcatctccatcggcatc
gacgacatgctggtgccgaagcagaagtacgagctgatcgagcgcgccgagaaggaagtc
aaggagatcgagcagcagtacgtctccggtctcgtgaccgctggtgagcgctacaacaag
gtggtggacatctggggcaagaccggcgacgaagtcggcaaggtcatgatgtcgcagctg
tccaagcagaagaccatcgaccgcaacggcaacgaagtcgaccaggaatcgttcaactcg
atttacatgatggccgactccggtgcccgcggtagcgcggcccagatccgccagctggcc
ggcatgcgcggcctgatggccaagccggacggcagcatcatcgagacccccatcacggcg
aacttccgtgaaggtctgaacgtgctgcagtacttcatctcgacccacggcgcccgtaag
ggtctggccgacacggcgttgaagaccgcgaactcgggttacctgacccgccgtctggtc
gacgtgacgcaggatctggtggtcaccaccgaggactgcggcaccgatcagggcatcaac
acccgcgcgctggtcgaagggggtgaagtcatcgaatcgctgcgcgaccgcatcctgggc
cgcgtgcccgcgatcgacgtgctgcacccggagacacagcaggtggtcatctccgccggc
cagatgctggacgaggacgccctcgacctgctggaagccgctggggtcgacgaagtcaag
gttcgcaccccgctgacctgcgccacgcgcttcggcctgtgcgccaagtgctatggccgc
gacctgggccgcggtgggctggtgaactccggtgaagcggtcggcgtgattgccgcccag
tccatcggtgagccgggtacccagctgaccatgcggaccttccacatcggtggtgccgct
tcgcgcgctgccatcgcctcgagcgtggaagccaagtcggacggcatcatcggcttcaac
gccacgatgcgctacgtgaccaacggcaagggcgagctggtcgtgatttcgcgttcgggc
gaaatcgtgatcaccgacccgcacggccgtgagcgcgagcgtcacaaggtgccgtacggc
gcgatcctgacggtcaaggccgaccagaccatcaaggcgggcaccgtgctcgccaactgg
gatccgctgacccgtccgatcatcaccgagttcgccggtcaggccaagttcgagaacgtc
gaagaaggcgtgaccgtggccaagcaggtggacgaagtgaccggtctgtcgaccctggtc
gtgatcgacccgaagcgccgtggtgccgccaaggtcgtgcgtccgcaggtcaagctgctg
gatgcctcgggcgccgaagtgaagatcccgggcaccgaccacgccgtgaccatcggcttc
caggtcggcgcgctgatccagatccgcgacggtcaggatctgtcgccgggcgaagtgctg
gcgcgcatccccatcgaaggtcagaagacccgcgacatcaccggcggtctgccgcgtgtg
gccgagctgttcgaagcccgttctccgaaggacaagggcgccctggctgaaatcaccggc
acggtgtccttcggcaaggaaaccaagggcaaggttcgcctgcagattaccgacccggac
ggcaaggtgtgggaagacctggttccgaaggaaaagaacatcctggtgcacgaaggccag
gtggtcaacaagggcgaatccatcgtcgacggcccggccgatccgcaggacatcctgcgt
ctgctgggcatcgaagagctggctcgctacatcgtcgacgaagtgcaggacgtctaccga
ctgcagggcgtgaagatcaacgacaagcacatccaggtgatcgttcgccagatgctgcgc
cgcgtccagatcgtcaacccgggcgacacgcactacatcgccggtgagcaggtcgagcgt
tcggaactgctggacaccaacgaccgcatgcgtgccgaaggcaagatgatcgccacgcac
agcgatgtgctgctgggcatcaccaaggcttcgctgtcgactgactccttcatctcggcc
gcttccttccaggaaacgacccgcgtgctcaccgaggctgccatcatgggcaagcgcgac
gagctgcgtggcctgaaggaaaacgtcatcgtgggccgcctgatccccgccggcaccggc
atggccttccaccaggctcgcaaggccaaggaagagatggacgacaccgagcgtcgcgcc
atcgccatgcaggaagcgcaggagcgcgctgcgatggagctggcggcgctggaggaaacc
accgacgcggccccggccgaaggtggcgagaccgcagccgagtga
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integrated database retrieval system
