Aquabacterium olei: DEH84_03750
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Entry
DEH84_03750 CDS
T05429
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
aon
Aquabacterium olei
Pathway
aon02020
Two-component system
aon02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aon00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DEH84_03750 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DEH84_03750 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aon03021
]
DEH84_03750 (rpoN)
Transcription machinery [BR:
aon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DEH84_03750 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
HTH_3
HTH_AsnC-type
LacI
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AWI52629
UniProt:
A0A2U8FNQ7
LinkDB
All DBs
Position
complement(830375..831829)
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AA seq
484 aa
AA seq
DB search
MNTPMMRVEHRQHQTLTPRLQQAVRLLQLSSLDFAQEIRDAMGKNPFLETEDAEPGAEEN
STSGSSDVPTAVTTAANEPVIDSAPTTSEAEPDVEWERDSWQQSTSPRSGSGDGETSVMD
MVPADVGLRQHLHAQTGLRHLSPRERMLVNCVIESLDDDGYLRSALCDVPCLAELEPEVT
QAELDEALAFVQRLDPAGVGARNVAECLRLQLHLIECPTTREVAADIIEHHLERLAHRDS
MNLARVMDRPVHEVEAACNRIRHMDPRPGWRHGSADIQYVTPDVIARKIKGRWTAVLNPA
VVPRVRLNQVYADLFRRHRDGQHSELAAHLQEARWTVRNVEQRFATILSVAEAILERQHH
FLEYGPMAMKPLGLREIAEEVGLHESTVSRVTNNKYMATPAGVFELKYFFSRSMPTQSGG
TCSATAIRGLIKDMIEAEDGAHPLSDAEIARQLARQGLTVARRTVTKYRQLLKLPAVEQR
RRHT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacccatgatgcgcgtggagcaccgccagcaccagacgctgacgccccgcctg
cagcaggctgtgcgcctgctccaactgtcgtcgctggactttgcccaggaaatacgcgat
gcgatgggcaagaacccgttcctcgaaacggaggacgcggagcccggcgcggaagaaaac
agcacgtcagggagcagcgatgtcccgaccgcagtcaccacggcggccaacgaacccgtg
atcgacagcgcgcctaccacgagtgaagccgagcccgacgtcgaatgggagcgtgacagc
tggcagcagagcaccagcccccgcagtggcagcggcgacggcgaaacgagcgtgatggac
atggtgccggccgacgtcggcctgcgtcagcacctgcacgcccagaccgggctgcgccac
ctctcgccccgcgagcggatgctggtcaactgcgtgatcgaatcactggacgacgacggc
tacctccgctcggcgctgtgcgacgtgccctgcctggccgaactggaaccggaggtcacc
caggccgagctcgacgaggccctggccttcgtgcaacgactcgatccggccggcgtgggc
gcgcgcaacgtggccgagtgcctgcgactgcaactgcacctcatcgaatgcccgaccacc
cgcgaggtggccgctgacatcatcgagcaccacctggagcgcctggctcaccgcgacagc
atgaacctggcacgcgtgatggaccgccccgtgcacgaggtcgaagccgcctgcaaccgc
atccggcacatggatccgcggcccggctggcgccatggttcggccgacatccagtacgtc
acgcccgatgtgatcgcccgcaagatcaagggccggtggacggccgtgctgaaccccgcc
gtggtgccacgggtgcggctcaaccaggtctatgccgacctgttccgccggcaccgcgac
ggacagcactcggaactggccgcccacctgcaggaagcccgctggacggtgcgcaacgtg
gaacagcgcttcgccaccatcctgtcggtggccgaggccattctcgagcgccagcatcac
ttcctcgaatacggcccgatggccatgaagccgttgggcctgcgcgagatcgccgaagag
gtcggtctgcacgaatcgaccgtgtcgcgcgtgacgaacaacaagtacatggcgaccccc
gcgggcgtgttcgagctcaagtactttttctcgcgctccatgccgacccagagcggcggc
acctgttcggccaccgccatccggggcttgatcaaggacatgatcgaggccgaggacggc
gcccatccactgtccgacgccgagatcgcgcggcagctggcccggcaaggtctcacggtg
gcgcggcgcaccgtcaccaagtaccggcagttgctgaagctgccggcagtggaacagcgc
cgccgccacacctga
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