Aquabacterium olei: DEH84_04140
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Entry
DEH84_04140 CDS
T05429
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aon
Aquabacterium olei
Pathway
aon03420
Nucleotide excision repair
aon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DEH84_04140
03430 Mismatch repair
DEH84_04140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aon03400
]
DEH84_04140
Enzymes [BR:
aon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DEH84_04140
DNA repair and recombination proteins [BR:
aon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DEH84_04140
MMR (mismatch excision repair)
Other MMR factors
DEH84_04140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AWI52698
UniProt:
A0A2U8FPC3
LinkDB
All DBs
Position
complement(917535..919523)
Genome browser
AA seq
662 aa
AA seq
DB search
MSETPNEPIFAPRGLVPTDEQHAIQLARKRHLIIEANAGAAKTTTLALRLAQALLRGADP
DRVLALTYTDTAVQALRDALARIGLPADTRRRLRVMTFDAFCTERMQAIEGCTVPFHAEP
EALRAPVLRAIDRVLRNVDERYPDEFAIQGDGAASVEGLLAAFLHLKGTMQLMVEAADRS
LTPTLAAEIGHDYATLKIFQAYEHIRRGGHPDHHAFRSEHDATYDLARLLLDEDAWLGDP
HPLDLGLHLVLVDEMHDTNRAMFTVLRKLMARNRAAFVGVGDRDQVIHAVAGADARFMGD
LFDREVAEATRYPLSTTWRFGSTLAQAVSGLARHKPYAAQTVRDTEVEVIATVGPADRNW
HLTRLVNERVGLDPGTPASAIAILLRQPHQSVELENHLLDRGIDYRTTGFDTYLMRPEVL
FVRGLFACSRGHFGDIERTETRLAVLQALLRFAGSHVDTGEAQAGEPPEEAERARLTAQA
LKQVCQQPTLAGAFLENQVLRNAAPAVRQRLEDALDVLHNEDTEVLLRRFVRVLQPAALA
ARVMVRRQDIAQVAANIEGLIQSVATFDHLTAFFRAMIERERRQQAMKPQHCILLSSIEA
AKGLEFEHVILPGLNKGEFALGGDTTDNRNLLYVAMTRARRRLTILCDRTRPSAYLQDAG
LL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacaccgaacgagccgatctttgcgccgcggggcctggtgcccacggacgag
cagcacgccatccagctggcgcgcaaacgacacctgatcatcgaagccaacgccggcgcg
gccaagaccacgacgctggccctgcgcctggcccaggccctgctgcgcggggcggatccg
gaccgcgtgctcgccctcacctacaccgacaccgcggtacaggccctgcgcgacgcgctg
gcccgcatcggcctgcccgccgacacacgccgccgcctgcgcgtgatgaccttcgatgcc
ttctgcaccgagcgcatgcaggcgatcgagggctgcacggtgccttttcacgccgagccg
gaggcgctgcgcgcgcccgtgctgcgtgccatcgaccgcgtgctgcgcaacgtcgacgag
cgttaccccgacgagttcgccatccagggcgatggcgctgccagcgtggaaggcctgctg
gccgccttcctgcacctgaagggcacgatgcagctgatggtcgaggccgccgaccgctcg
ctcacgcccacgctggccgccgagatcgggcacgactacgccacgctcaagatcttccag
gcctacgagcacatccgccgcggcggccaccccgatcaccacgccttccgcagtgagcac
gacgccacctacgacctggcgcgtctgctgctcgacgaagacgcctggctgggcgacccg
cacccgctcgacctcggcctgcacctcgtgctggtcgacgagatgcacgacaccaaccgc
gccatgttcaccgtgttgcgcaaactgatggcgcgcaaccgggcggccttcgtgggggtg
ggcgaccgcgatcaggtgatccacgccgtggccggggccgatgcccgcttcatgggcgac
ctgttcgaccgcgaggtggcagaggccacacgctatccgctcagcaccacctggcgcttc
gggtcgacactggctcaggccgtgagcgggttggcacgccacaagccctatgccgcgcag
accgtgcgcgacaccgaggtggaggtgattgccaccgtgggtccggccgaccgcaactgg
cacctcacccgcctcgtcaacgagcgcgtgggcctcgatccgggtacccctgcatcggcc
atcgccatcctgctgcgccagccacatcagtccgtcgagctggagaaccacctgctcgac
cgcggcatcgactaccgcaccacggggttcgacacctacctgatgcggcccgaagtgctc
ttcgtgcgcggtctgttcgcgtgctcgcgcgggcacttcggcgacatcgaacgcaccgag
acccgactggccgtgctgcaggcgctgctgcgcttcgccggctcgcacgtcgacaccggc
gaggcgcaggccggcgagccgcccgaagaggccgagcgggcgcgcctgacggcccaggca
ctcaagcaggtgtgccagcaaccgacgctggccggcgccttcctcgagaaccaggtgttg
cgcaacgccgcacccgccgtgcgacagcgactggaagatgcgctcgacgtgctgcacaat
gaggacaccgaggtgctgctgcgccgcttcgtgcgggtgctgcaacccgcggccctggcc
gcgcgcgtgatggtgcgccgtcaggacattgcccaggtggcggccaacatcgaaggcctg
atccagtcggttgccaccttcgaccacctcaccgccttcttccgcgcgatgatcgagcgc
gaacgccgccagcaggccatgaagccacagcactgcatcctgctgtcgagcatcgaggcc
gccaaaggtctggagttcgaacacgtcatcctgcccggcctcaacaagggagagttcgcc
ctcggcggcgacaccaccgacaaccgcaacctgctctacgtcgcgatgacgcgcgcccga
cggcgcctgaccatcctgtgcgaccgcacacgaccgagcgcctacctccaggacgcgggc
ctgctctga
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