Aquabacterium olei: DEH84_04565
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Entry
DEH84_04565 CDS
T05429
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aon
Aquabacterium olei
Pathway
aon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DEH84_04565 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aon03400
]
DEH84_04565 (recB)
Enzymes [BR:
aon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DEH84_04565 (recB)
DNA repair and recombination proteins [BR:
aon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DEH84_04565 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWI52774
UniProt:
A0A2U8FQR8
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All DBs
Position
1014641..1018357
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AA seq
1238 aa
AA seq
DB search
MSTSQTLDALRFPLWGSRLIEASAGTGKTWTIAALYLRLVLGHGGPDAHPRPVRPGEILV
MTFTRAATRELSDRIRARLIEAARCFRGELQPAPHDALLRELMASYPEGASRQAAAWRLA
MAAEGMDEAAVHTIDAWCQRMLREHAFDSGNLFDETLVADEARLLTEAVQDYWRQQVYPL
RGEWLDRVLSIWPGVEDLAQDMKALLADPPEAHRVAGTLQHVIATEHQQWADAVNRLRAG
WSERITWLRGWFATQLNDHRKDWNGNKLRADSIDKWMALLQDWADAPEPFELNFKELGTG
ARRLTPEGLLDARGSKAGPIEVPPVFVDAEQMLADLQGLPVPGGAARLHAAATVHARLKR
LKRQTAQFGFADMVERLDQALTGSHGERLRQRILTQYPVALIDEFQDTSPRQFRLFDQLY
RTADNDPQTALLLIGDPKQSIYGFRGADIHAYLQARRATEGRHYMLGTNHRSTAELVGAV
NHWFARAEDRPGPGAFLFREDDDNPVPFVPVAARGRAERFVSAEGPVPALQIVHATESAH
IARSVMKGFAARCAEQIVHWLNDPQAGFEQAGERFERLRPADIAVLVRTGREAAAVRREL
RLRNVASVYLSEKDSVFRSQEARDLLFWLRAVAQPLDARLVRAALATRTVGLSLDELGWL
AASDEAFDARSEQLRRLQTVWQTQGVLTMLRQSLHVLDLPARSLAEVDGERRLTNVLHLA
ELLQQASTRLEGEQALIHWLAEQIDEDGSTSEEQVVRLESDADLVKIVTMHKSKGLEYPV
VCVPFGCAHRAVEKARKGVVRLPGADGQRTLHLEVDDTVQQLADRERLREDLRLLYVALT
RPRHALWFGFAALKAKGKSAKCVTHLSATGYLLGGQEAIEPAGWQTLLEQLAQGQPDIAL
QPAALDEARPLTALQAREVPPPLAERVPYAAWFDRRWSVGSFSALVRALASPTAPSPGDR
LPRPADDEAAAEAPSDEAPGATPPAIAPTSERPIRHRFTKGALAGNFLHDQLEWLATEDF
ALATRPQLTERLRQRCARAGHGEHAEALVAWLQAVLLTPLPGPEAALAELQHLLPEMEFW
LPAQRLPAASLDAVCRAHILPGLTRPELPERELHGMLMGFADLVFEHEGRYWVLDYKSNH
LGDADAAYHREALAGAMLAHRYDVQAAIYLLALHRLLRERLGEAYDPAQHLGGAVYLFLR
GTEGPERGVCRVPATPALMTALDHLLDTEAPHSEVRAP
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagccagaccctggacgcgctgcgtttcccgctgtggggcagccgcctcatc
gaagccagcgccggcaccggcaagacctggacgattgccgcgctctacctgcgcctggtg
ctcggccacggcggcccggatgcccatccgcgtccggttcgtcccggcgagatcctcgtg
atgaccttcacgcgggcggccacccgcgagctgtccgaccgcatccgcgcgcgcctgatc
gaggctgcccgctgcttccggggcgaactgcagccggccccgcacgacgcgctgctgcgc
gagctgatggccagctaccccgagggcgcgagccgtcaggccgctgcatggcggctggcc
atggccgccgaaggcatggacgaagcggcggtgcacaccatcgacgcctggtgccagcgc
atgctgcgcgagcacgccttcgacagcggcaatttgttcgacgagaccctggtggccgac
gaggcccgtctgctgaccgaagcggtgcaggactactggcgccagcaggtctaccccctg
cgcggcgagtggctggatcgggtgctgagcatctggcccggtgttgaagatctcgcgcag
gacatgaaggcgctgcttgccgatccacccgaggcgcaccgtgtcgcaggcacgctgcag
catgtgatcgccaccgagcaccagcagtgggctgatgcggtgaaccgcctgcgcgcaggc
tggtccgagcgcatcacgtggctgcgcgggtggttcgccacccagttgaacgaccaccgg
aaggactggaacggcaacaagctgcgcgccgattcgatcgacaagtggatggccttgctg
caggactgggccgacgcgccggagcccttcgagctgaacttcaaggaactgggaacgggc
gcgcgacgtctgacacccgaagggctgctcgacgcgcgtggcagcaaggccgggcccatt
gaggtgccgcccgtgtttgtcgatgcagagcagatgctcgccgatctgcagggcctgccc
gtcccgggcggtgccgcgcgcctccacgccgcagccaccgtgcacgcccgcctgaagcgc
ctgaagcgccagaccgcgcagttcgggtttgccgacatggtcgagcgcctggatcaggct
ctgactggctcacatggtgagcgacttcggcagcgcatcctcacgcagtatccggtcgcc
ctgatcgatgagttccaggacacgtcgccgcgccagttccgcctgttcgatcagctctac
cgcaccgccgacaacgacccgcagaccgcgctgctgctcattggcgaccccaaacagtcc
atctacggattccggggggccgacatccacgcctacctgcaggcgaggcgcgccaccgaa
ggccggcattacatgctcggcaccaaccaccgctccaccgccgagttggtgggcgccgtc
aaccactggttcgcacgggcggaagaccgccccggccccggcgccttcctgttccgcgaa
gacgacgacaaccccgtgcccttcgtgcctgtggccgcccgtggccgggctgaacggttc
gtcagtgccgaagggcccgtgcccgcgctgcagatcgtgcatgccaccgagtcggcccac
atcgcgcgctcggtgatgaagggctttgccgcccgctgtgccgagcagatcgtgcactgg
ctcaacgacccgcaagcgggtttcgagcaggcgggtgagcggttcgagcgcctgcgtccg
gccgacatcgccgtgctggtgcgcacggggcgcgaggccgccgcagtgcggcgcgagctg
cgcttgcgcaatgtggcttcggtctacctctccgagaaggactcggtcttccgcagccag
gaggcccgcgacctgctgttctggctgcgggcggtggcccagccgctcgatgcccgtctg
gtgcgtgcggccctggccacgcgcaccgtggggctgagcctggatgaactgggctggctg
gcagcgagcgacgaggccttcgacgcacgcagcgagcagctgcgtcgcctgcagaccgtg
tggcagacccagggcgtgctcaccatgctgcgccagagcctgcacgtgctcgatctgcct
gcgcgcagcctcgctgaagtcgatggcgagcgccggctcaccaacgtgctgcatctggcc
gaactgctgcagcaggccagcacccggctggagggcgagcaggccctcatccactggctg
gccgagcagatcgacgaagatggcagcaccagcgaggagcaggtcgttcgcctcgaaagc
gacgccgacctcgtcaagatcgtcaccatgcacaagagcaagggcctcgagtatccggtc
gtgtgcgtgccctttggctgtgcccaccgcgcggtcgagaaggcccgcaagggtgtggtg
cgcctgcccggtgccgatggccagcgcacgctgcaccttgaagtggatgacaccgtgcag
caactggccgaccgcgagcggctgcgagaagacctgcgcctgctctatgtggcgctgacc
cgtccgcgccatgcgctgtggttcggctttgccgcgctcaaggccaagggcaagagcgcg
aaatgcgtcacccacctgagcgccacaggttatctcctcggcgggcaggaggcgatcgag
cccgcaggatggcagacgttgctggaacagctggcccagggacagcccgacatcgcgctg
cagccggctgcattggatgaagcccgcccgctcacggcgctgcaggcgcgtgaagtcccg
ccgccactggccgaacgcgtcccctacgccgcatggttcgaccggcgctggagcgtgggc
agcttctcggcgctggtgcgggcgctggcgagcccgacagccccgtccccgggcgatcgc
ctgccccgcccggccgacgacgaagccgccgccgaggcgccctccgatgaggcgccgggc
gcaacaccgcctgccatcgccccgacgagcgagcgccccattcgccatcgcttcaccaag
ggcgcgctggcaggcaactttctgcacgatcagctcgaatggctggccaccgaagacttc
gcgctggccacccggccgcagctgaccgaacgcctgcgccagcgctgcgcccgcgccggc
catggcgagcacgccgaggcgctggtggcgtggctgcaggccgtgctgctcacgccgctt
cccgggcccgaggcggcgctggccgagctgcagcacctgctgcccgaaatggagttctgg
ctgccggcgcaacggctgcctgccgcgtcgctggatgccgtgtgccgcgcgcacatcctg
cccggcctgacccgccccgaactgcccgaacgcgagttgcacggcatgctgatgggcttc
gccgacctggtgttcgagcacgaagggcgctactgggtgctcgactacaagtccaaccac
ctgggcgacgcggatgccgcctaccaccgcgaggccctggctggcgccatgctcgcgcac
cgctatgacgtgcaggctgccatctatctgctggccctgcatcgcctgctgcgcgagcgc
ctgggtgaggcctacgacccggcgcagcaccttggcggtgcggtctaccttttcctgcgg
ggcaccgaagggcccgagcgcggcgtgtgccgggtgcccgccacgccggcgctgatgacc
gccctcgatcacctgctcgacaccgaagcccctcacagcgaggtccgtgccccatga
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