Aquabacterium olei: DEH84_09725
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Entry
DEH84_09725 CDS
T05429
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aon
Aquabacterium olei
Pathway
aon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEH84_09725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aon03019
]
DEH84_09725
Enzymes [BR:
aon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DEH84_09725
Messenger RNA biogenesis [BR:
aon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DEH84_09725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HI1480
DegT_DnrJ_EryC1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AWI53683
UniProt:
A0A2U8FRL0
LinkDB
All DBs
Position
2146983..2148329
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AA seq
448 aa
AA seq
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MSFENLGLAEPLLKAVSEAGYATPTPIQAQAIPAVLNGGDLLAGAQTGTGKTAGFTLPLL
HMLAATAKPASGGRRPIRALILTPTRELAAQVEECVRLYGKYLPIRSMVMFGGVGMNPQI
EALKRGVDILVATPGRLLDHHQQGTLDLSHVEYFVLDEADRMLDMGFIHDIRRVLAILPP
RKQSLLFSATFSDEIKALAERLLDKPQVIEVARRNATADTIAQKVHPVDRDRKKELLTHL
IQSNNWHQVLVFTRMKHGANRLVEFLLKQNITAMAIHGNKSQSARTRALADFKSGELQVL
VATDIAARGIDIDQLPHVVNFELPNVAEDYVHRIGRTGRAGADGEAVSLVCVDEEGFLAD
IEKLIKRPIPREVVAGFEPDPNARPEPIQLGRRVLHGNTGSRSGGGGRPAGGGGGGQRGG
RGPSSGRQDGRMERGPRDQSGAGRPRSR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgaaaatctggggttggcagaacctctcctgaaggccgtttcggaggccgga
tacgccacccccacgccgatccaggcacaggccattccggccgtcctgaacggcggagac
ctccttgccggcgcacagaccggcaccggcaagaccgccgggttcacgctgccgctgttg
cacatgctggccgccacggccaagccggcctcgggtgggcgtcgtcctatccgcgccctg
atcctgactcccacgcgcgaactggccgcccaggtcgaagagtgcgtgcgtctctacggc
aagtacctgccgatccgctcgatggtgatgttcggtggtgtgggcatgaacccgcagatc
gaagccctgaagcgcggcgtcgacatcctggtcgccacgccgggccgcctgctggaccac
caccagcagggcacactcgacctgagtcacgtcgaatacttcgtgctggacgaggccgac
cgcatgctggacatgggcttcatccatgacatccgccgcgtgctggccatcctgcccccg
cgcaagcagagcctgctgttctcggccaccttctccgacgagatcaaggccctggccgag
cgcctgctcgacaagcctcaggtgatcgaggtggcccgccgcaacgcgaccgccgacacc
atcgcgcagaaggtgcacccggtcgaccgtgatcgcaagaaagagctgctcacccacctg
atccagtcgaacaactggcaccaggtgctggtcttcacgcggatgaagcacggcgccaac
cggctggtcgagttcctgctcaagcagaacatcacggccatggcgatccacggcaacaag
agtcagagcgcgcgcacgcgggcgctggccgatttcaagtccggcgaattgcaggtcctt
gtggccaccgacattgcggcgcgcggcatcgacatcgaccagctgccgcacgtggtgaac
ttcgagctgcccaacgtggccgaagactacgtgcaccgcattggccgcaccggccgcgct
ggcgccgacggcgaggccgtttcgctggtgtgcgttgacgaggaaggcttcctcgccgac
atcgagaagctgatcaagcgcccgatcccgcgcgaggtggtggccggcttcgaacccgac
ccgaatgcccgcccggagcccatccaactcggccgccgtgtcttgcatggaaacaccggc
tcgcgttcgggcggcggtggccgtcccgcgggtggcggtggtgggggtcagcgaggtggc
cgcggcccgtcgtcgggtcgccaggatggccgcatggaacgcggaccgcgcgatcaatct
ggcgcgggtcgcccccgcagtcggtga
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