Anastrepha obliqua (West Indian fruit fly): 129236446
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Entry
129236446 CDS
T09777
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129236446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129236446
Spliceosome [BR:
aoq03041
]
Complex B
Other components
Prp19-related factors
129236446
Complex C
129236446
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_YTH1
zf_CCCH_4
RRM_occluded
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Nup35_RRM_2
zf-CCCH_10
zf-CCCH_DUS3L
zf-CCCH_PARP12
RRM_7
Motif
Other DBs
NCBI-GeneID:
129236446
NCBI-ProteinID:
XP_054726815
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Position
1:148416252..148417786
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AA seq
420 aa
AA seq
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MSMSKTTNTYNRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTRPFTIFRWCPG
ARMRFKKTEICQTCARLKNVCQTCLLDLEYGLPIQVRDAALKVADTIPQSDVNKEYYIQN
IDRELRDGDGTEAAGTVGRSLAANEMLAKLARTAPYYKRNRPHICSFWVKGECKRGEECP
YRHDKPNEPDDPLCEQNIKDRYYGRNDPVAEKIMKRAATLPTLEPPEDRNITTLYVGNLP
EEITEPELRDHFYQYGEIRSIALVPRQQCAFVQYTKRGASELAAERTFNKLVLHGRKATI
KWAHSQAKQSGLAKTDRRFEVPAVPPTPVANPNDFFNLQQEQVTVLPPGMKLHQIPPSLI
PASSYQMYSQAYAAPYSNIPMPTTSATALEGIPPPPTGQMVPGQVHYPSQDPSRLGAVKK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcaaagacaacaaacacttataataggcaaaattgggaagatgccgagttt
ccaatcttgtgccaaacttgtcttggagataatccgtacgtgcgaatgattaaagaacga
tttggtaaagaatgtaagatatgtacgcgcccgtttaccatattccgatggtgccctgga
gcgagaatgcgttttaaaaaaactgaaatttgtcaaacctgcgctcgtttgaaaaacgtg
tgtcagacatgtctactagacttggaatacggtctgccaatacaggtgcgcgacgctgcg
ctcaaagtggccgatacaatccctcagagtgatgtgaacaaggagtactatatccagaac
attgaccgcgagttgagagatggtgatggtactgaggcagcaggtacagttggacgttca
ttagccgccaacgagatgttagcaaaattagcacgaactgctccatattataaacgtaat
cgtccacatatttgttcattctgggtgaagggcgagtgcaaacgtggcgaagaatgtcca
tatcgtcacgacaagccaaatgaaccggatgacccactttgtgaacagaacataaaagat
cgctactatgggcgaaacgacccagtggctgaaaaaattatgaaacgagctgctacgttg
ccgacgctggagccacctgaagatcgcaatattacaactctatatgttggtaatttgccc
gaagaaataacagaaccagaattgcgtgatcatttttatcaatacggcgagatcaggtcc
attgcattggttccacgccagcaatgtgcatttgtgcagtatactaaacgtggagcttca
gaattagcagctgaacgtacttttaataaattggtgttgcacgggcgtaaagcaacaatc
aagtgggcacattctcaagccaaacagagtggcttggcaaagacagataggcgtttcgaa
gttcccgccgtaccgccgacgcctgttgctaatccgaatgactttttcaatcttcaacaa
gagcaagtgaccgtgctgcctcctggtatgaaactgcatcaaataccacccagcctaata
cctgcgtcgtcgtatcaaatgtactcgcaggcgtatgctgcaccatactcaaatattcca
atgccaactacctctgccacggctttggaaggtattccaccaccaccaactggtcaaatg
gtgcctggccaagtgcactaccctagtcaggatccaagccgattgggtgcggtgaaaaag
tga
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