Anastrepha obliqua (West Indian fruit fly): 129236468
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Entry
129236468 CDS
T09777
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129236468
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
129236468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
RPA_interact_C
Zn_Ribbon_TF
C1_2
FtrD-like
Motif
Other DBs
NCBI-GeneID:
129236468
NCBI-ProteinID:
XP_054726857
LinkDB
All DBs
Position
1:150435056..150440031
Genome browser
AA seq
917 aa
AA seq
DB search
MEDGAELITDQNLSCKVCGERQFTLREGFYYCQECGTKQEQVRAVEVERDEDFLQAKHVK
KQKIHAVKTEKPNLTSWECYNYILRGLVNDLLSLGAKEELKLMTLQLWAAYLRRSEVAFF
NKKRVELPKLGFRFLQRDASALYNHAHKRRAQKRKRRRTDDSGASMASSESASAREFRRC
RRKLDESSYSLNSSLSSTGVSQTTMSSANTSSTGTTSHAIKLQFSARARKRLKKRMPVKH
IEKHALDAEGNLNCHNMKPLARSINRTEHALLTMNVRQIYTILGIALNLIGDEIQLCDLV
RFIDEEHISTKNVIEYFPENIAKHGKKLLQEIQFYKYPTKYSDKVLREHIGLVSKFINIR
EFKQPEMIKLTERYVTELNLPPDISTYTEHLINLLPPKMSTRVSHVYPAYEARTMAYIIF
VLKLLFGLDGHTENKVSDAATKVNHCLQKLSEEGCSSNAKLSQPPLLFVWKDWVDYVEMR
KVIVAHYNSNFCRQFKQHQSTAQLLKEMEEEQRTQLEQAVHTAEGASVENNAKVSTMHRI
FEQFLDEYNDELPAEHVESIIFPPSLTPAHAYFKRILLHCSNAGTSASFKIPEFMRTDHM
QRTLAPYAHAKELKEYFKQHKWELKVRRMPSVRQRNSVGIFRPINECQERSGKTVCTKKP
DFNITEENWLQSIVEEELIEELEFKTEYDRYEKNYMKKLHAEAFKRRQAAENIEADENTN
EFACPFGADDEDSIPPPPEKTVTVNEDIDVRSMHSINAFSECDMEPIKKADLPIVLKPHR
ALNNVHLFADLSDDEADEVTATEDDYNNTTETAERTCTLLTSNMDCWTLLGYPHQLNGCQ
KKILESKFSRSFFWLLDTCAQSINVDWCVIYEELLTIELMFAYGIEDLNGFKDCVRFKYN
HPIKDFNMLINSYRELW
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggaagatggtgctgaacttataactgatcaaaatttgagttgcaaagtatgtggagaa
cggcaatttaccctacgtgaaggtttctattattgccaggaatgtggaacaaagcaggag
caagtgcgcgctgtcgaagtggaacgcgatgaagacttcctgcaggctaaacacgtgaaa
aagcaaaaaatccatgccgttaaaactgaaaaacctaatctcacttcttgggaatgttat
aattatatacttcgcggtctcgtcaatgatctgctgtcccttggcgctaaggaagagttg
aagttaatgaccctccaattgtgggccgcttatttgcgccgcagcgaagtggccttcttt
aacaaaaaacgcgttgaattacctaaactaggatttcggttcctacaaagagatgcttct
gctttgtacaatcacgctcataaacgtcgagcccagaagcgtaagcgtcgcagaactgat
gactcgggcgcatccatggcaagcagtgaatcggcaagtgcacgcgaatttcgtagatgt
cgacgaaaattggatgagtcttcgtacagcctaaattcatccttaagttctacgggtgta
tcacagactaccatgtcttcggcgaatacctcaagcaccggcaccacaagtcacgcaatt
aaattacagttttcggcacgtgcccgaaaacgtttaaaaaaacgtatgccagtaaaacat
attgaaaaacatgcgttagatgctgaaggtaatttgaattgtcacaacatgaaaccattg
gcaagatcaataaatcgcacggagcacgctttgctcacaatgaatgtacgacaaatctac
actatactaggcatagcgttaaatttaattggtgatgaaatacagttgtgtgatttggtg
cgattcatcgatgaggagcacataagcacgaaaaatgtgatagaatacttcccggaaaat
attgcgaagcatggcaaaaaattgctgcaagaaattcagttttacaaatatcctactaaa
tatagtgacaaggtgcttcgagagcacattggtttagtttcaaagttcataaacatacgc
gaatttaaacagcctgaaatgataaaactaacagagcgttatgtgactgaactaaatctg
ccaccagacatatccacttacacagagcatctaataaatttgctgccacccaaaatgagc
acacgcgttagtcatgtatatcccgcctacgaggcacgcactatggcttacataattttc
gtgctcaagttgttatttggcctcgatggtcatactgagaataaggtatcggacgcagca
actaaggtcaatcactgtctgcaaaaattatctgaagaaggatgcagctcaaatgccaag
ctctcacagccgcccttactatttgtatggaaggattgggtagattatgtggaaatgcgc
aaagttatagttgcgcattacaattcaaacttttgtcgacaattcaagcagcaccagagc
acagcacaacttttgaaagaaatggaagaggagcagcgaacgcaattagagcaagctgtg
catacggcagaaggtgccagcgtggaaaataatgcaaaagtcagcactatgcatcgaata
tttgaacaatttttggatgaatataatgatgaattgcccgcagaacacgttgaatcgatc
atctttccaccgagtctaacaccagcgcatgcctacttcaaacgcatattactgcattgt
tctaatgccggaaccagcgcttccttcaaaattccagagtttatgcgtaccgatcatatg
caacgcacattagctccatatgcgcacgcgaaggagctgaaggagtatttcaagcagcac
aaatgggagttgaaagtacggcgtatgccttccgtaagacaacgcaacagtgtgggcata
tttcggccaatcaacgagtgtcaagagaggagtggcaagacggtatgcaccaaaaagcct
gattttaatataaccgaagaaaattggctgcaatctattgtagaagaagaacttatagag
gagttagagttcaaaacggaatatgataggtacgagaagaattatatgaagaagctacac
gcagaggctttcaagcgccgccaagctgcagaaaatatagaagctgacgaaaatacaaac
gaatttgcttgcccttttggcgccgatgatgaggactcaataccaccaccaccggagaaa
actgttacagttaacgaagacattgatgtacggtcgatgcattcaattaatgccttcagt
gaatgtgacatggagccaattaaaaaagcggatttaccaattgtgctcaaaccacataga
gcgctaaataatgtgcacctttttgctgatctcagtgacgatgaagcagacgaagtgact
gcaaccgaagacgattataataacacaactgaaacagcagagcgtacatgtacgttattg
acatcgaatatggattgctggacccttttgggttatccacatcagctaaatggttgtcag
aaaaaaatattagaaagcaaattctcacgttcattcttttggcttctcgacacatgcgca
cagtctatcaacgtcgactggtgtgtgatttatgaggaactgttaactatcgaattaatg
tttgcgtatggtattgaagatttgaatggatttaaagactgtgtgcggtttaaatacaat
catcctataaaagatttcaatatgttaataaattcgtacagagaattgtggtga
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