Anastrepha obliqua (West Indian fruit fly): 129236481
Help
Entry
129236481 CDS
T09777
Name
(RefSeq) nucleoporin Ndc1
KO
K14315
nucleoporin NDC1
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129236481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129236481
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129236481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
129236481
NCBI-ProteinID:
XP_054726882
LinkDB
All DBs
Position
1:complement(151739780..151742155)
Genome browser
AA seq
578 aa
AA seq
DB search
MSIAVECKKLCLFRCMLALTNSITMQCLLLGIFLLFINFQVLHPVRWISETISLLFSLYT
WLSILPLNGAVVLYGILLGKSFLSVKRYYPTRFQWLVYTAPRKVLFLVLHLLIGYLNAWL
YSNFWHVDYRNIQSDCYGTKCINGRYVFLLCIGFFAACLHFTRENLRTDPELEFPIDQEL
AVIRIRSLMYRTLYNSLLASIIPTICFGLVFWLLGGIITRYFASVFSLDVDESTLTFFAI
AGNVRLLFYGWILTAQILSNMHLMQNFFAIHLSEEVSFAIERKPVLCGMDAEEVTLVDAL
NCSIVPIVQSLGARDLYNIAINNAESRRKEIFALSVPGAHPYNWTQLSAQCLSLINAFTE
ELAASLKKISVVKTTPLFATVKPTTATEAAEKILLRQYNETYGIRRMMTEKCAENTETTK
TMSPACKRIHDQIEKMKKQFEQTWRAIFRAIPGLFYMFGEPDGAKTAFLLSNSDTILKVV
QGLAGICAASLNEDKYGVVQVTLPQIIKTLLTLKTELDKLNNVNLNGKKLDRNYITLKNG
VKRSLYNICTVFRDYLPDLVDSREDLRKLHCYVNYVET
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgcagtggaatgcaaaaaactgtgcttattccgctgtatgctcgcactaaca
aatagtattactatgcaatgcctgttgcttggtatcttccttttgttcatcaacttccag
gtgctgcatcctgtgcgttggataagtgagacgataagcttacttttttcgctctacact
tggttaagcattttaccactaaatggagcagttgtgctatatggcatactgttgggaaaa
tcctttctttccgtgaaacgctactaccctacaagattccaatggttagtatatacagcg
ccacgcaaagttttgttcctcgtactacatcttctcattggttacttgaacgcatggttg
tattctaatttttggcatgtggattaccgtaatattcaaagcgattgctatggcacaaag
tgtatcaacggacgttatgtgtttctcttatgtattgggttttttgctgcgtgtctacat
tttacccgagagaatttgcgtactgatcccgagttggaattccccattgatcaggagtta
gcggtgattcggattcgttcgttaatgtataggacgctttataattcactattggcatca
attatacctacaatatgttttggactcgttttttggctactcggaggaataattactcgt
tattttgctagtgtgttcagcttagatgttgatgaaagtacgctgacattcttcgcaatt
gctggaaatgtgcgcttactattttatggttggatattaacagcgcaaatactaagtaat
atgcatctcatgcaaaatttcttcgccatacatctttcggaggaggtatcttttgcgatt
gagcgcaaaccagttttgtgcggtatggatgctgaagaagtaacattggttgatgcactc
aattgttccatagtaccgatcgtgcaaagtttaggcgcacgagacttatataatatagcc
attaataatgcagaatcaaggcggaaggaaatttttgcgctttcagtaccaggtgcccat
ccatacaattggactcaattgtctgcacagtgcttaagtctaattaatgcatttaccgag
gaactagcggcatcactcaaaaaaatttctgtcgttaaaacaacgccactttttgctact
gttaagcccacaactgcaaccgaagctgctgagaaaatattattgcgtcaatataatgag
acctatggtattaggcgtatgatgacggaaaagtgcgcagaaaacaccgaaaccaccaaa
actatgtcgcctgcttgcaagcgtatacacgatcagatagagaaaatgaaaaaacaattc
gaacaaacatggcgtgctattttccgtgcaatacccggtctcttttatatgtttggcgaa
cctgatggcgctaaaaccgcttttctactttccaactcagacacaattttaaaggtagta
caaggtttggctggcatttgtgcagcctcactgaacgaagacaaatatggcgtggtgcag
gtgacactaccacaaataattaaaactttgctaacactgaaaaccgaattggataaattg
aacaatgtaaacttgaatggcaaaaaattagatcgcaattacatcacactcaaaaacggt
gtaaaacgtagtttgtacaatatctgcacagtttttcgagactatttaccagatctcgtt
gatagtcgcgaggatctacgaaaactgcactgctatgttaattatgtggagacttaa
DBGET
integrated database retrieval system
