Anastrepha obliqua (West Indian fruit fly): 129236845
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Entry
129236845 CDS
T09777
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aoq01009
]
129236845
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129236845
04131 Membrane trafficking [BR:
aoq04131
]
129236845
03036 Chromosome and associated proteins [BR:
aoq03036
]
129236845
Enzymes [BR:
aoq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129236845
Protein phosphatases and associated proteins [BR:
aoq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129236845
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129236845
Membrane trafficking [BR:
aoq04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129236845
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129236845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
PagP
Motif
Other DBs
NCBI-GeneID:
129236845
NCBI-ProteinID:
XP_054727079
LinkDB
All DBs
Position
2:complement(54832085..54847295)
Genome browser
AA seq
1088 aa
AA seq
DB search
MDLLTSSPIVTRRGAQKAKIQTRAMVKSAVAASKPSAALVEAKRKAKLLKMQEQSQQDQV
VKDIFQNAVSAKTIIKKPTGIVYDESMAQHRCLWDENHPERPERFTRVLERCKELHLIEQ
CQRIPSRRATKDEILLLHSVEHYDLLQRTSGVQDEAAMEDLSSKFDSIYIHPSTFELSLL
ATGSTIDLIENVISGNVQNGMAIIRPPGHHAMKAEFNGYCFFNNVAIATQYAIDILKLSK
IMIVDWDIHHGQGTQRFFYNDPRVLYFSIHRFEHGTFWPYLKESDFDAIGNGNGTGYNFN
VPLNKTKMGNGDYLAIFQQLLIPVAVEYQPELIIISAGYDAALGCPEGEMEVTPAFYAHL
LNSLMKLAQSRVAVILEGGYCLDSLSEGAALTLRTLLGGTCPALVEKLEPPGEVIQDTIL
NCIYAHRPYWRCLQIQPIYTMEELNNVNPQPKLHKVSRLFIGGEPLPERFPTRGTAPVML
PEVVAQNEKRLKFLKHETKLLTPHVRVCYVYDDIMLQHSNTFEDGHPEQPARIKRIYEMH
IDYKLTERMKQLSPRAATTDEICLAHTRAHVNFIRRISDKDELQRMGEKYNSVYFHPKTF
DCATLAAGSVLQVVDKVLSGEARSGVCIVRPPGHHAESDVPHGFCIFNNVAIAAQYAIRD
HGLKRVLIVDWDVHHGNGTQHIFESQSNVLYISMHRYDNGTFFPKSKDADFDVVGKGAGV
GFNVNIPWNKKGMGDMEYVMAFQQLVMPIAYEFDPELVLVSAGFDAAIGDPLGGCKVTPE
AYGLFTHWLSGLAGGRIILCLEGGYNVNSISYSMTMCSKSLLGDPIPPIQVNGNTARNLS
AAYTSCVETIQNCLSVQQRYWKSLVFNKRLPQFASENNNEDFLSATMQNLAIKTDEERCV
IGCENAADTEVALEPSGSKPKVKVKTLTEFLTENLEALQNNEMFAVVPLKTCPHLKQLRP
EEAPKIIDSNAPCENCLSTVENWMCLSCYQILCGRYVMEHMLLHSIATSHPFALSFSDLS
VWCYPCEAYVDNSKLHTYKNLLHRHKFGEDMVWSYPVSNCNDNVDDDDADYDGDYDANAF
SIQLEPNN
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggacttattgactagctctcctattgttactcgtcgtggggcgcaaaaagctaaaata
caaactcgtgcaatggttaagtctgcagtcgcagcaagcaagccgagcgcagcgttagtc
gaagctaaacgcaaagcaaaattactcaaaatgcaagaacaaagccaacaagatcaagtt
gtgaaagatatatttcaaaatgcggtcagcgcaaaaacaattattaaaaaacctactggc
atagtatacgatgaatctatggcgcagcaccgttgcctttgggatgaaaatcaccctgag
aggccagaacgcttcacccgagtgttggagaggtgcaaggaactgcatctcatagaacag
tgccaaagaattccatcacggcgtgccacaaaggatgaaatactcctgttgcatagcgtt
gagcactatgatcttcttcagcgcacttcgggcgtgcaagacgaagcagcaatggaagac
ctaagctctaaattcgattcaatttatatacatccgtccacatttgaattgtctctactg
gcgacaggttccaccatagacttaattgaaaacgtaatttccggcaatgtgcaaaatggt
atggcaattatacgaccacccggccatcacgcgatgaaagctgaattcaatggttactgt
ttcttcaacaatgtggccattgcaacacaatatgcgattgacattttgaagttaagcaaa
ataatgattgttgattgggacatacatcacggacaaggcacgcaacgcttcttctacaat
gatccaagggtgctttatttttcaatacatcgttttgaacatggcaccttttggccatat
cttaaagaatcggattttgatgccattggcaatggcaacggcacaggttacaattttaat
gtacctttgaataaaactaaaatggggaatggagactatttggcaattttccaacagttg
cttatacccgttgcagttgaatatcaaccagagttgattattatatcggccggctatgat
gctgctttaggctgtcccgaaggcgaaatggaagtcacacccgcattctatgcacatttg
ctgaattcgcttatgaagttggcacaatcacgtgttgccgtcatattggaaggtggttac
tgcctcgattccttatcggagggtgcggcactcaccctgcgcaccttgctaggcggtaca
tgcccagcgctggtagagaaattggagccgccaggcgaagtcatacaggacacaatactc
aattgcatttatgctcaccgtccttactggcggtgcctgcaaatccaaccaatatacacc
atggaggagctaaataacgtaaatccacaaccaaaattgcataaagttagtcgactattt
atcggcggtgaaccgctgcccgaacgtttccccactagaggcacggcaccggttatgcta
cccgaagttgtggcacagaacgagaaacgtttgaaattcctaaaacatgaaaccaaacta
ttgacgccgcacgtacgcgtttgctatgtttacgacgatattatgctgcagcatagcaac
acctttgaggatggccatccagagcaacctgcgcgcattaaacgcatctatgaaatgcac
atagactacaaactcaccgaacgtatgaaacagctgtccccgcgtgcagcaacaaccgat
gagatttgcttggcgcatacgcgtgcacatgtcaatttcatacgccgcataagcgacaag
gatgagctgcagagaatgggtgagaaatataattctgtctattttcatccgaagaccttc
gattgtgccaccttggcagcgggctcagtgctgcaagtggtggacaaagtgctgagtggt
gaggcgcgcagcggtgtgtgcatagtgcgtccacctggccaccatgctgagtccgatgtg
ccacatggcttctgtatattcaataatgttgcaattgccgcgcagtatgccatacgtgac
cacggccttaaaagagtgttaattgtggattgggatgtgcatcatggcaatggtacgcag
cacattttcgaatcgcagtcgaatgtactctatattagtatgcatcgctacgacaacggc
acctttttccccaaaagcaaagacgctgatttcgatgtggttggtaaaggcgccggtgtg
ggttttaatgtgaatataccgtggaataaaaaaggcatgggcgatatggaatatgtgatg
gctttccaacaactcgtaatgccaattgcatatgaatttgatccggaattggtgcttgta
tcggctggcttcgatgccgctatcggcgatccactcggcggctgtaaggtaacccccgaa
gcgtacggccttttcacgcactggctttctggcttagccggcggccgtataattttatgc
ttagaaggcggctacaatgtaaattccatttcctactctatgacaatgtgcagcaaatca
ctgttgggtgatccgattccacccatacaagttaatggcaacactgcacgcaatcttagc
gcggcatatacgagctgtgtggaaaccatacaaaactgcttgagtgtacagcaacgttat
tggaagagtttggtgttcaacaagcggctgccgcaattcgctagcgaaaataacaatgag
gattttctttctgctactatgcaaaatttagctatcaaaacggatgaggagagatgcgtg
attggctgtgaaaatgccgccgatacagaggtggctttggaaccgagcggcagtaagccg
aaggtaaaagttaaaaccctaacagaatttctcaccgaaaatctagaggctttacaaaat
aatgaaatgttcgccgttgttccattaaaaacatgccctcatttaaaacagttgcgtcct
gaggaggcgccgaaaatcatagatagcaatgctccatgcgagaattgcttgtcaacggtc
gagaactggatgtgtctgagctgctatcaaatactctgcggtcgttacgtcatggaacac
atgctcctgcacagcatcgcaacatcacacccgtttgcgcttagctttagtgatttatcg
gtttggtgttatccttgcgaggcatatgtcgacaatagcaaattacatacctacaaaaat
cttctgcaccgacataaattcggcgaggacatggtgtggtcgtatcccgttagtaattgt
aacgacaacgttgatgatgatgatgcggattatgatggtgattacgatgcaaatgcattt
agcattcagcttgaaccaaacaactga
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