Anastrepha obliqua (West Indian fruit fly): 129237346
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Entry
129237346 CDS
T09777
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129237346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129237346
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129237346
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
129237346
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Peptidase_S26
Motif
Other DBs
NCBI-GeneID:
129237346
NCBI-ProteinID:
XP_054728006
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Position
2:complement(85993198..85994225)
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AA seq
218 aa
AA seq
DB search
MELQSSLATSSNLEDIKEVVCLPGQRICLSEETIVAGQGTYERGGYIYATLAGTVRVKEK
DKCKYIEVKCAGSQTIVPVAGDVITARVLQVNQRFAKCSIICIGDHILERTYRGIVRKED
VRATEKDRVEMYKSFRAGDVILARVLPQTELSCYQLSTAENELGVVVATSSESGASGPPM
VPVSWTEMQCPDTLVKEPRKVAKIVAESSLKTELPQEK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcagtccagtcttgctacttcaagtaatttagaggatataaaagaggttgta
tgtttaccgggacaaagaatatgtctttccgaggagaccatagttgcaggtcaaggcaca
tatgaacggggcggttacatttatgctacattggctggtaccgtgcgggttaaagaaaag
gacaagtgtaaatatatcgaagtaaaatgtgctggcagtcagactattgtacctgtagca
ggcgatgtaataacggcgcgtgtcctacaagtgaatcaacgttttgcaaagtgttccata
atctgcatcggagaccacatacttgaacgtacgtatagaggaattgtacgaaaggaagat
gttcgtgccaccgaaaaggatcgtgtcgaaatgtataaatcatttcgtgcgggcgatgtc
atactagcacgagtgcttcctcaaacagagttatcctgttatcaactaagtactgcggaa
aatgaattaggcgtagtggttgcgacttctagtgaaagtggtgcgagtggaccaccaatg
gtgcctgttagttggacggaaatgcaatgtcccgacacattggtaaaggagcctcggaaa
gttgcgaaaatagttgcagaaagttccttaaaaacagagctgccacaagagaagtag
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