Anastrepha obliqua (West Indian fruit fly): 129237435
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Entry
129237435 CDS
T09777
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aoq03009
]
129237435
Ribosome biogenesis [BR:
aoq03009
]
Eukaryotic type
90S particles
Other 90S particles
129237435
Pre-60S particles
Other pre-60S particles
129237435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
129237435
NCBI-ProteinID:
XP_054728164
LinkDB
All DBs
Position
2:28888009..28895260
Genome browser
AA seq
1391 aa
AA seq
DB search
MGKFRSKLKRHTKGKTWSKGQSSTSNPEQMKHRLKAKSRFFQPNLSLAPPEDTSNPNALT
LNAVLKHDQRLAYNAETTTVNDVAGSLKSFSLRDDGLEDETMSESQQGTFKTFKTFASNY
SACSNMSFKKLLVGFRASSELHKEMLAILTALTEIIRERGGTESSTEYFILLMEQIEAST
EDNDIIAGISLLSMGIKSVPDAVLRKRFGETAQTFLACLQRFMESNNQNIVKYIIGCLSV
LLCAQDYMTWTYSSNWQYIDAILSFTIHSKPKVRKAAQHAIVSIVHGSSFMRPAKDAEEE
GEDNTTVEQPKVTSHPASSRITKFCLNQFKPEVLTNSQTTVLHTLILLKDILNGLKTEDI
RSICENLLSIMTAANVLIRTTCFQTLHALFASRTTNLNGPLCAKLLAAIHEYRPDRADVR
QTIAWITVLKEGHIHLASLDLNLCMNALPRFFEICATDLWMSERAEIINSVSNCIKELLY
ECVKSACETPEKAEVYRIPIMRIIASLEKVLSAPFGEMAKHVILIFTIVFEVCGRYFSKE
LSPSLLTLSKRYDTQSALRVQIEHSIIAAIQSMGLENALKTIPLTNSKGEVLLDRSWLLP
LMREGTKGASFKFFKEFVLPLALDCNNKWHKYAQEKQQTLSHTFELLCCQLWGLLPGFCR
EPVDPENLRLIAPTLGNALDNNPEFRAPIYDGLTELISNEESAEIKEVLAKYSKNFLPRL
FNIYTQKPNGTYEADLRKKGLDVIKLYLTRTPEDVLKELFETAKTQLSSTAVGTFEYDAI
FDINAVLLIFQTCEVIRVFFEAFIVPVLKNEKSKLVAKDEQKLKKQQRRTYELLRDILTS
DAASCQKFARKNSIALQKLILDAFATSCAVCQAARLRCLKILIESRKSLTVNDKIVMKTI
PEAVISYKEFSTRKENVSEELIIYLANLYQEAGKLNDFVDILTAGFAGDESLITNTILAF
RTVVQQQGKNLTITTLEFIMEQILVFLVQKARTQAEAAVAFLITFIKVMPSPLVANHLQT
IMKSMSAMSKDTKRYCRIQIGYLLKKLCKRFTAEELIKFVPGDDEVTHRRLKKIRKQMRR
ENRKQLNEKDKNDEDDSEDDFVAGLEKKSVTIDDILADSDSDLPEEMDTNDGVPNKAEKK
KLKRGGSTFIREDPEDIVDLADIKSIGNVLTNRPDESTNVAGGTKTKNKDPNRGFKTAED
GRLIISDKAMRGAGGGGGDDESSSSDSDDADDEAVEKKRAPKRGMEVDSSDDEEELPATS
RKRKAQDAISMRSGKSTASKYVAGGKGIHRPLGAASDALSMKSGYSARSAKSGKSAATSA
YAGSEYTTKKAKGDMKKKGKLDPFAYIPLSRNTLNKRKRAKHAGTFKNIVNGARKGALKG
VKQRVAKPYKQ
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggggaaatttcgttcaaaactgaaacgccatacaaagggcaaaacatggagcaaagga
caatcgtccacttcaaatcctgagcaaatgaagcaccgtttaaaagccaaatcgcgtttt
ttccagccaaacttgagtttagcaccacctgaggatacctccaatccgaacgcactcact
ttgaatgcggtgctgaagcatgatcagcgtctggcttataatgccgagacgactacagtc
aacgatgtggccggcagcctgaagtcatttagtctgcgcgacgatggactggaagatgaa
accatgtcggaatcgcaacaaggcacttttaaaacattcaaaacatttgcttccaactat
agtgcctgcagcaatatgagttttaaaaagctgctagtgggttttcgtgcttcatccgag
ttgcataaagaaatgttagctattttaacggcgctaacggaaattatacgcgaacgcggt
ggcacagagtcatccactgagtatttcatactgctcatggagcaaattgaggccagcacg
gaagacaatgacatcattgctgggatttcgttgctgtctatgggcatcaaatcggtgcca
gatgcggtgttgcgcaaacgtttcggcgagaccgcacaaacgtttttagcgtgcttacaa
cgctttatggagtctaataatcagaatattgtcaaatatataattggctgcttgtccgtg
ttgctttgtgcgcaagactacatgacgtggacttattcttcgaattggcaatatattgac
gctatactatcatttactatacattcgaagcctaaggtacgcaaagctgctcaacatgct
atcgtgtccatcgtacatggcagctcattcatgcgtcctgccaaagatgcagaagaagaa
ggagaggacaatactactgtggagcagccaaaagtgacaagccacccagccagcagtcgt
ataacaaaattctgtttgaaccaatttaaacccgaggtgctgaccaattcacaaacaacg
gtgctgcatacgctaatactgctcaaagacattttgaacggacttaaaacggaagacata
cgctcgatttgcgaaaatttactttccattatgaccgctgctaacgtgctcatacgcacc
acttgcttccaaactctgcacgcgctttttgcctcacgcacgaccaatttgaatgggcca
ttatgcgccaagttgctggctgccatacatgagtatcgtcccgatcgcgctgatgtgcgt
caaacaatagcttggattacggtgctaaaagaggggcacattcatcttgcctcgttggac
ttgaatttatgtatgaatgcgttaccgcgttttttcgaaatctgcgccactgatttgtgg
atgtccgaacgcgcggaaatcattaatagcgtgtcgaattgcattaaggagttgttatac
gaatgtgtcaagtcggcttgcgagacaccagaaaaggctgaagtttatcgcataccaatt
atgcggatcatcgcttcgcttgagaaggtgctaagcgcgcccttcggcgaaatggccaaa
catgttattcttatattcacgatcgtttttgaagtttgtggcaggtattttagcaaagaa
ctctcaccctcactactcacactatcgaagcgctacgacacacaaagcgctttgcgtgta
caaatagagcactccataatagcggcaatacaatccatgggcctggaaaatgctttgaaa
acgattccactaaccaatagcaaaggtgaggttttgctagaccgttcatggctcttaccg
ctgatgcgggagggcaccaaaggcgcttctttcaagttcttcaaggagtttgttttgccc
ttggctttggattgcaacaacaaatggcataagtacgctcaagaaaagcaacagacgctg
tcacatactttcgagttattgtgttgccaactgtggggtcttttaccaggtttttgccga
gagccagtagatccagaaaatctacgcttaattgcgcctactctaggcaatgccttggat
aataatccagagttccgtgcaccaatttacgatggtttgactgagttgatttcgaatgag
gagagcgcggaaatcaaagaagtcctggcaaagtactccaaaaatttcctaccgcgttta
ttcaatatatacacgcaaaagcccaatggcacatacgaggcggatttgcgcaaaaaagga
ttggatgtgattaagttgtacctgacaagaacacctgaagatgtgctgaaggagcttttc
gagactgcaaagacacagctgtccagcacggctgttggcacatttgagtacgacgctatt
tttgatatcaacgctgtgttgctaatcttccaaacttgcgaagttatacgcgttttcttc
gaagcctttattgtacccgttttgaagaacgagaagtctaagctggtggctaaagatgaa
cagaaactgaaaaagcagcaacgtcgcacatatgagcttcttcgtgatatactcacatca
gacgcggcttcttgtcagaaatttgctcgtaaaaatagcattgccttgcagaaattgatt
ttagacgcattcgccacgagttgtgccgtctgccaggcagcgcgtttgagatgcctgaaa
attcttattgaaagccgcaaatcgctaactgtgaatgacaaaatcgttatgaaaacgata
ccagaagctgtgatctcttataaggaattctcaacgcgcaaagaaaatgtgtcggaagag
cttatcatatatttggccaatctataccaggaagccggtaaactgaatgactttgtcgac
atactaacagccggttttgccggcgacgagtcgctcatcacaaacacaatattggccttc
cgcacggttgtgcagcagcagggcaaaaatttaaccattaccacactcgaattcataatg
gaacaaattctggtatttctggtgcagaaagcccgcacacaagccgaggcagcggtggcg
tttctgatcacatttataaaagtgatgccctcacctttggtagccaatcatttgcaaaca
attatgaaatcaatgtccgccatgtccaaagacaccaaacgttattgtcgcatacaaatc
ggctatttgttgaagaaactgtgcaagcgtttcactgccgaggaactaatcaaatttgtg
cccggcgatgatgaagtaacacatcggcgtctgaagaaaatacgtaagcaaatgcgtcgt
gaaaatagaaagcaactaaacgaaaaggacaagaacgacgaagatgactcagaggatgac
ttcgttgccgggctggaaaagaagagcgtaactattgacgacatattggccgattcggat
tctgatttgccggaagagatggatacaaacgacggtgtgcctaataaagctgagaaaaag
aaactaaaacgcggcggctctacgttcatacgtgaagatccggaggatattgttgatttg
gctgatatcaaatcgattggaaatgtgctaacaaatcggccagatgagtctacaaacgtt
gccggaggcacaaaaactaagaataaagatccaaatcgtggttttaaaactgcagaagat
ggaagactgattataagtgataaggcaatgcgcggtgctggcggcggtggcggcgacgat
gaaagcagcagcagcgatagcgatgacgctgacgacgaagctgttgaaaagaaaagagcg
cctaaacgcggcatggaagttgactccagtgatgatgaagaggaactaccggcaacaagc
cgcaaacgtaaggctcaagatgccattagcatgcgttcgggtaaaagtacagcctcaaaa
tatgtagccggcggcaaaggtatacatcgccccttaggcgctgcgagtgacgcgttatcc
atgaaatccggctactcggcgcgatcggccaaatctggcaaatctgcagcaacatctgcc
tatgccggcagcgagtatacaacgaagaaggctaagggagatatgaagaagaaaggcaag
ctcgatcctttcgcatacataccactcagtcgaaatacgctaaacaaaagaaaacgagca
aaacatgcaggcacatttaagaacatagtaaatggcgcacgcaaaggtgctctgaaaggt
gttaaacaaagagtcgctaagccttacaaacaataa
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