Anastrepha obliqua (West Indian fruit fly): 129237477
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Entry
129237477 CDS
T09777
Name
(RefSeq) retinoblastoma family protein isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129237477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoq03000
]
129237477
Transcription factors [BR:
aoq03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
129237477
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
129237477
NCBI-ProteinID:
XP_054728229
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Position
2:99452430..99538567
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AA seq
862 aa
AA seq
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MTDTKELVACFRTQYEDLCRELNMDRETEEISWNMFEEVLKRSTLEGDPLHWFCCALYAA
CRLSYTPTVGECNTIVIGNCISLNKMLRCCNISISEFISKIKVWHEMANLPCSFLRQIER
LERTPGITFHLYCRYNDIFEKLFVSSRHDKKNTKYRSVARCSASKLYDLCWCLYLCAKNE
DPSYNMDIVTSFHLLLCCIDLIYINVLAENRVDLINPGFEGIPEKWGTPSFSSQKIFNHC
IIGALCTLTEALPNDARDMKANHCKAIFTKFFQTKTLHGNENTFLEVISNGNFERNVKSL
NSAYEQYVLSVGEFDERILLSNPNYRKLSSSDISATTHSVTNPQTPYTRKHILPNKEEFS
EPVASATNNVKKLKDIAKLSEPTDFIRQAGIDTLNKIYEKLTQMQNDFKSALGNAEVGNR
FQIAESLFFYLLDKILRIETRTKPNIDIKILLSTETFISTLIACCVEIVLDAYQCQMKFP
WILSCFSISAFHFHKIIEIVVRSHDGVLSRPLIKHLNYIEESCLESLAWQRGSPLWDIIR
TFALPTWSEVDVDNLVKRHQPQMQSPNCSAYETFSSTIVNESTRRDLFNSAKETTYENEA
TFSCKKHMDGNRRAASLTIFCRKFYKLAWIRLKELCRELKLAEEPHLNKLWTLFEYSITQ
RTELMQDRHLDQMLMCGIYLYIRVQEIQFKSFMDIMKFYRKQPQAQSSTYREVLIEPAEE
KNGPPQYRDIIYFYNNIYVKKMTPYALNFSGKKQSQQNVPLSPHPTEKQSYPRKLSNNLI
IISRMEKSEHSHSQVLTYEFSKSPGKNLEDLNYVISRGKRNLPFNELESSDGPVIERKIP
KKTPIFLQKCREVLQDRQEEKK
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaccaaggaattagttgcttgttttcgcactcagtatgaagacttgtgtaga
gagctgaatatggatcgtgaaacggaagaaatttcatggaatatgttcgaggaagtctta
aaacgatccacattggagggggatcccttacactggttttgttgtgcactctatgctgca
tgtagattgtcttacacaccgacggtgggcgaatgcaatacaattgtaattggcaattgt
atttcactgaataaaatgcttcgctgttgtaatataagtatatcggaattcatatcaaaa
ataaaggtttggcatgaaatggcaaacttgccatgcagtttccttcgtcaaattgaaaga
ttggaacgaacgcccggcataacttttcatctttactgccggtacaatgatattttcgag
aaattattcgtctcatctcgacatgataagaaaaacacaaaatacaggtctgttgcacga
tgctctgctagcaaattatacgacttatgttggtgtttatatttgtgtgctaaaaacgaa
gatcctagttataatatggatattgtcacctccttccatttattgctttgttgcatcgat
ctaatatacataaatgtgctcgcggagaaccgagtggatctaatcaatccgggcttcgaa
ggcataccggaaaaatggggtactccgtcttttagttctcaaaaaatctttaatcattgt
attattggagctctgtgtacgctaacagaagctttacctaacgatgcaagggatatgaaa
gcaaaccactgcaaagcgatttttacgaagtttttccagacaaagacactacatgggaat
gaaaatacgtttttagaagtcatttcgaatggcaacttcgaaaggaatgttaaatcttta
aacagtgcatatgaacagtacgtacttagcgtaggagaattcgatgaaaggatcttatta
agcaatcctaattatcgaaaactaagcagttcagatattagcgccaccacccattctgtc
acaaatccacagacgccttacactcgcaagcatattttaccaaacaaagaggaattttct
gaaccagtagcaagtgctactaataatgtcaaaaaactaaaagatatagcgaaactttcc
gaaccaaccgattttataaggcaagcgggaatagatactttaaacaagatttatgagaaa
ttgacacaaatgcaaaatgattttaaatctgctttgggtaatgctgaggtcggtaaccgc
tttcaaattgcggaatcgttatttttctatttattggataaaattctacgaatagaaaca
agaacgaaacctaatatagatatcaaaattttactgagtactgaaactttcatatcgaca
ctaatcgcttgctgtgtggaaatagttctagatgcatatcaatgtcaaatgaaatttcca
tggattttatcatgcttcagtatatcggctttccatttccataagattattgaaatagtt
gtaagaagtcatgacggtgtactctcgcgtccattgattaaacatttgaattatattgaa
gagtcttgccttgagtctttagcctggcaaagaggatcgccactgtgggatatcatcaga
acatttgcattaccgacatggtctgaagtagacgttgataatttagtaaaacggcatcaa
cctcagatgcagtctccaaattgttcagcatacgaaacctttagttctacaattgtcaac
gagtcgacgaggagggacctctttaatagtgcgaaagaaactacttatgaaaacgaggct
accttcagttgcaagaaacatatggacggcaatagacgagcggcttctttaactatattt
tgtaggaagttctataaacttgcttggattagattaaaagagctgtgtcgtgaactcaag
ttggcagaagagccacatcttaataagttgtggacgctatttgaatattcaataacccaa
aggacagagttaatgcaagaccgccatctggatcagatgcttatgtgtggaatttattta
tacataagggtgcaggaaatacaatttaagtcatttatggatataatgaagttttatagg
aagcaaccgcaagctcaaagtagcacatatagagaagttcttatcgaaccagccgaagaa
aaaaatgggccaccgcaataccgtgacataatatatttttataataacatatatgttaaa
aaaatgactccatacgcccttaattttagtggaaaaaaacaatcacagcagaacgtgccc
ttgtcaccacatcctacggagaagcaatcatatccccgaaaattgtctaataatctcata
attatatcgaggatggaaaagtctgaacattcacattcgcaggttttaacatatgaattt
tcaaaaagtcctggaaaaaatcttgaagatctaaattatgttatcagcagaggcaagcgg
aatctgccttttaatgaattggagagcagcgatggacctgttattgaaagaaaaattccg
aagaaaacaccaatatttttacaaaaatgcagagaagttttgcaagatagacaagaagaa
aaaaagtga
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