Anastrepha obliqua (West Indian fruit fly): 129237764
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Entry
129237764 CDS
T09777
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129237764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129237764
Enzymes [BR:
aoq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129237764
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
129237764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_binding
Motif
Other DBs
NCBI-GeneID:
129237764
NCBI-ProteinID:
XP_054728666
LinkDB
All DBs
Position
2:120381562..120398750
Genome browser
AA seq
1377 aa
AA seq
DB search
MPKEQFREADVIKKISHVQFCISSPEEIQQEAHLRIVSKNLYQGQRQPVPYGVLDKRMGV
STKDATCDTCGQGLNECIGHFGYLDLALPVFHVGHFRATISILQMICKSCSHVMLREQDK
RIFEKKLLNPDLSYLAKKSLHGQILGKAKKLAKCPNCDAPSGGVKKGQGLLKILHDPCKG
KKPDAVMSDALNELLLATENNRELQQTLTSHNQVEELNPLTVLELFKSIPKSDIPLLGMT
SGYASPANLIVTRIFVPPVCIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQKHMTGGG
KIELIQEDWDFLQLHVALYFHSELSGIPLNMAPKKMTRGIVQRLKGKQGRFRGNLSGKRV
DFSGRTVISPDPNLMIHQVGVPERVAKILTYPERVNPANIQKMKELVKNGTQKHPGANYV
QQRGSTFKKYLAYGNRDKVAHDLMCGDIVERHLCDGDIVLFNRQPSLHKMSIMCHQAKVQ
PQRTFRFNECACTPYNADFDGDEMNLHLPQTEEARAEALILMGNKSNLITPKNGEILIAA
TQDFITGGYLLTQKDEFLTKEQAMQLAACFLAGPDANMRIDMPPPAILKPRKLWTGKQIF
SLLLRPNTQCPVKANLITKGRNYTSNYDLCVRDSWVIVRNSELICGSMDKSTLGSGTKNC
IFYAILRDFGELYATKCMWRLARIASYFIQNRGFSFGISDVTPSNKLLEEKQKLLENGYA
KCDEYILEMKKGTLQCQPGCTPEQTLEAVMLRELSSIREQAAKACFRELHPTNSALIMAL
SGSKGSNINISQMIACVGQQAINGKRVPNGFENRALPHFEKFSAIPAARGFVQNSFYSGL
TPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGSVRNAIGEIVELIY
GGDGLDPVFMEVKNKPVDMVRQLNHLRATVSDRKSTPLAASEITPVARKILADDEFTMSR
KDFQNEIIAFIEKVAQKIADVQAKYRRHPKLAHEIERFTEEQIRTFMRWVNDKYNRAVTE
PGTAVGAVAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAE
IENNTNMEFARKVKARIEKTTLGEISSYIEEVYRPDDCFLVIRLDLNRIRVLGLEINAET
VRYSICTSKLRIKPALVDVVGASVITVHIDTSKHGATLNAELQRLTISIQNVVVAGLSNI
SRAVIAIDDARTPSTYKLCIEGAGLRDVMATFGVVGTRTKSNNIWEVYNTLGIEAARTTI
MTEITDVMEGHGMSVDHRHIMLLASQMTSRGEVLGITRHGLAKMRESVFNLASFEKTADH
LFDAAYFGQIDAVDGVSERIILGMPASIGTGLFKLIHNHEDTALPQVEPPIFQTVTA
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagagcagtttcgcgaagcagatgtcataaaaaaaatttcccatgtgcaattt
tgcattagcagcccagaagaaatccagcaggaagcgcatttacgtattgtttcaaaaaac
ttgtatcaagggcaacgtcaacctgttccttatggcgtgctggataagcgcatgggtgta
agcaccaaagatgccacctgtgatacttgtggccagggtttaaatgagtgtattggtcat
tttggttacttggatcttgctttaccagtatttcacgtaggtcatttccgtgcaacaatt
tcaattttacagatgatttgcaaaagttgctcgcatgtaatgcttcgggagcaggataag
cgcatattcgagaagaagctgctaaatccagacctgtcgtatttagcaaagaagtcgttg
cacggccaaattttaggtaaagcaaaaaaactggcaaaatgtcccaactgtgatgctcct
agtggaggcgttaagaaaggtcaaggactactaaagatactgcatgacccatgcaaagga
aaaaaaccagacgctgtcatgagtgatgcgctaaacgagttattgctagcgacagaaaat
aatcgcgaacttcaacaaaccttaacatctcacaaccaagtagaggaactaaatccatta
acagtattggaattgtttaaaagtataccgaaaagtgatatacctttgcttggtatgact
tccgggtatgctagtccagcaaatttaatagtgacgcgcatttttgtaccaccagtttgc
atacgtccctcggttttgtccgaagttaaagctggaactactgaagacgatttgacaatg
aaacaaagcgaaatattgctcatcaacgatgttatccaaaaacatatgactggcggtggc
aaaatcgaacttattcaagaagattgggactttttacaactacacgttgcactgtatttt
cacagcgaactctctggtattccactaaatatggcgccgaaaaagatgacacgaggtatt
gtgcaacgcttaaagggcaaacagggtcgctttcgtggcaatttatctggcaaacgtgtt
gacttctctggacgcacagtcatatcacccgatcctaacctaatgatacaccaagtaggc
gtaccggaacgcgtcgccaaaatacttacctatccggagcgtgtaaatcccgcaaatata
caaaagatgaaagagctcgtgaaaaatggcacacagaaacatccaggtgccaattatgta
caacaacggggttcaacattcaaaaagtatctcgcatacggtaatcgtgacaaagttgcg
catgatctaatgtgtggtgacattgtcgagcgacatttatgcgatggcgatatagtgctc
ttcaatcgccaaccctcattgcataaaatgtctattatgtgccatcaggctaaggtgcaa
ccacagcgaacattccgtttcaatgaatgcgcatgcacaccgtataatgctgatttcgac
ggtgatgaaatgaatttacatttgccacagacagaggaggcacgtgcggaagcacttata
ctcatgggcaataaatccaatttgattacacctaaaaatggagaaatactcattgcggca
acacaagatttcattacaggcggctacctattgacacaaaaagacgaatttcttactaag
gaacaggctatgcaactggctgcatgctttctagctggaccagatgctaatatgcggatc
gatatgccaccgccggcaatattaaaaccacgaaaactctggacgggcaaacaaatattc
agtctactcttgcgtcctaacacacaatgtcctgtaaaggcgaatttgataacaaaaggg
cgcaactacactagtaactacgacttgtgtgtgcgagattcgtgggtcattgtgcgtaat
tcagaactcatttgtggttcaatggataagagcacactgggttctggtacgaaaaattgc
atattctatgctatattgcgggactttggagaattgtacgccaccaaatgcatgtggcgt
ttagcgaggatcgcttcatatttcatacaaaatcgtggcttctcctttggcatcagcgat
gttacaccaagcaataagctgctggaggaaaaacaaaaattattggaaaatggttatgct
aaatgcgatgaatatattttagagatgaaaaagggtacattacaatgtcaaccaggttgt
acacccgagcaaacgctcgaagcagtaatgttgcgtgagctctcatccattcgtgaacag
gcagctaaagcttgcttccgtgagctgcatcctacgaatagtgcacttattatggcgctg
tccggttcgaaaggctccaacatcaatatttcacagatgattgcatgtgtcggtcagcag
gccattaacggcaagcgggtgccaaatggatttgagaatcgtgctttgccacatttcgag
aaattctcggctataccggcagcccgtggatttgtgcaaaatagtttctactctggtctg
acgcctacggaatttttctttcatacaatggctggtcgtgaaggtttggtcgatacagct
gtcaaaacagccgagactggctatctacagcgccgattagtgaagtgcctggaagatctg
gtcgtgcattatgatggttccgtgcgtaatgccatcggtgaaatagttgagctaatctat
ggtggcgatggtttagatccagtttttatggaagttaaaaacaaaccagtagacatggtg
cgccaattaaatcatttacgagctacagtatcagatcgcaaaagcacaccactagcagcg
tctgaaattacgccggtggcacgtaaaatactagcagatgatgagtttaccatgagtcga
aaagatttccaaaacgaaattattgctttcattgaaaaagtagcacaaaagatcgcggac
gtgcaggcaaagtacagacgacatccgaaattggcgcacgaaattgaacgcttcaccgaa
gaacaaattcgcacttttatgcgttgggtcaatgataaatacaatcgtgccgttactgag
cctggcacggctgtgggtgccgtagctgcgcaaagtataggtgagccaggcacacaaatg
acactgaagacgttccattttgctggtgttgcttctatgaacatcacacagggtgtaccg
cgtattgttgaaattattaatgcaacaaaaacaatttcgacaccaatcataacagccgaa
attgaaaacaacacgaacatggaatttgcgcgtaaagtgaaggcgcgcattgagaaaaca
acgctgggagagatctcatcgtacattgaggaagtatacaggccagatgattgcttctta
gtcatacgtttggatttaaatcgtattcgggttttaggtttagaaattaatgctgagact
gtgcgttactctatttgcacctcaaaattacgcataaaaccagcgctggtagatgttgtc
ggtgcttcagtgatcacagtgcatattgatacgtcaaaacatggtgccacactcaacgct
gaattgcaacgtctcactatatctatacagaatgtcgtcgtagctggtttatcgaatatt
tcacgtgccgttatcgcaatagatgacgcgcgcacaccgtccacttacaagctatgtatt
gagggcgctggtttgcgcgatgttatggccacgtttggcgttgtgggcacgcgcaccaag
agcaacaacatctgggaagtgtacaatacattaggcattgaggcagcgcgcactaccatt
atgactgaaataaccgatgtgatggaaggtcatggcatgagcgtggatcatcgtcatata
atgttgctggccagtcagatgacctcgcgcggtgaggtgttgggtataacgcgacatggg
ctggcaaaaatgcgagagagtgtatttaatttggcatcgtttgaaaaaaccgccgatcat
ctattcgatgccgcttactttggccaaatcgatgccgtggatggtgtttcggagcgtatt
attctaggcatgcctgcctcaattggtactggactatttaagcttatacacaaccacgag
gacaccgcattgccgcaagtggaaccaccaatatttcagaccgttacagcgtga
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