Anastrepha obliqua (West Indian fruit fly): 129237960
Help
Entry
129237960 CDS
T09777
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129237960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoq03032
]
129237960
03400 DNA repair and recombination proteins [BR:
aoq03400
]
129237960
DNA replication proteins [BR:
aoq03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
129237960
DNA repair and recombination proteins [BR:
aoq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
129237960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
BRCT_TopB1_SLF1
BRCT_3
TopBP1_BRCT0
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
129237960
NCBI-ProteinID:
XP_054728937
LinkDB
All DBs
Position
2:67217304..67222433
Genome browser
AA seq
1508 aa
AA seq
DB search
MSFDDTINAYFVTTDTVEDRSSTKCKDLETAFKCLQNHIAEENIRQINASEGYPLIASRQ
LTKKDVFVFDQFEGDFFKQLQLTKSLIIGPRCLITCLQNSLPVPLGTSPIYTTAMRDLQI
CATGIALDQKERLRTYIQWMGGYYFQNLSRPVTHLISNTIKSTKYEHATMNGIPVMHVDW
VQRVWERSCIEDVSATDEEFDKYKLPIFFGTNITCTGLETEKKNEIMRLVNENGGTYHCA
FRSALVDIVITERGNTNSDKYKAAVRYKKDILCPEWIFDSAEKGFALPTKGYQVKSLKVS
TPIKGDRSIADFTQLSDTSRISVMASSARVGSMTVNDTICSGLNETAKQNDGTFVAPTTR
LTGSKDLQREVHRKQGAAVHYRLVYEEICPKQAKKAGNFLDGCCIYLSGFRLEEREKLNR
ILNVGGATRYDVVNEKITHIIVGQLDDGELRAWQRDGILTTVNIVRLDWLLQSIKLKQPA
SEVVYRMSLPTTREPDAPSPSSKKTLRSMNKSFKQPDKPKKKLFEPEEKSAETAETPSAA
TDLPLEEEEQHLIAQYSQENEPAVAVPNPIVAIKPNNVAMDSTLTAPMASSTLKAVVNIV
PPPASTTLTQNENSAKINSEIDFDNLDFFDGKSLYIDRAHFPEEFYSQMLSECEAAHGDI
VPPTFVDMVDYAIVSFERTLNARELPVKARHIVTDLYVENCMKQNKLVPIEYFHRHVPHT
ANSQPLEGMTIVISIYTALEYDFIDSVAQLLGATVNRVLAKKERPLLICPRAEGSKYEGA
IKWGYPVVTSAWLVQCAVEGKKLPFQHYLVGNSPSDFPVSPTLREKNLPNPTVCTPATSA
IEPMDTQENAENDLTKGVTAAKDFTPLRNKRVTELAGSFSRPSVPNITSNTPTTPDSPHT
PTNTYGRSSCNFEYLEGVVAELDNEDARACLRELIEEMRNNQTPELERIRRQACTPINRK
LPTPKGIPDFCTTPEFQKRIADAFERRWRLPTKKLKVDTPIEELRHRVVVSTCAALGVPF
SDTEDTPMTSAQAAMKALAATAEMSALAALTSNTYISPKRKSPNASNNESRYQQAGVVPR
AIFATSLNNSLSTSAQRSARVSEGDAFVPSTQTPTRSGSLGAAESRMVQHASFGKSTLDF
DKISFENTETDTVASHSKNTHNQSGIRSASALATSSPELQKITEYLKNCESRRQSLKESR
CTAGVGNATGSGIPESADNMVDNIETGGPAYGAGETETQHYVQPFESEQFGVCTENMVGW
RDPVEFGRERRSKASPSMQYKGTPRFSISCVDEDIRNDVINKIHKLGGTVSENLVNFDPD
CTHFICERPNRGEKMLGCVSSGKWVLSLKYIEECYAKDVFVDEELYEWGNSKALNLPQLT
PDEQLLSLAVHRWRKKLNGATSADGKKLGAFSGFRIILHIAERNSEAVKNVLRAGHAEVL
AVQSPFSACSAARNVTHCFVDVKKAPLTRADYEYLRTLGVQIYSQMYINAYLMYGEDVDA
AKYEIQIQ
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgacgacactatcaatgcatatttcgtcaccacagatactgtggaagaccgc
agctcaacaaaatgcaaggatttggaaacggcatttaaatgcctgcaaaaccatatagct
gaagaaaatatacggcagataaatgctagtgagggttacccgctcatagcctcgaggcaa
ctaacaaaaaaagatgtattcgtgttcgatcagtttgaaggtgatttttttaaacaactc
cagctaacaaagtcgctcataataggcccacgatgccttataacctgtttgcaaaactct
ctacctgtacctcttggcacaagtccaatctatacaacagcaatgcgcgacttgcaaata
tgtgcaactggtattgcgttagaccaaaaagaacgactacgtacgtatatacaatggatg
ggtggttattacttccagaatcttagtcggccggttacacatcttatatctaacacaata
aagtcgacaaaatacgagcatgcgacgatgaacggcataccggtgatgcacgtcgattgg
gtacaacgggtttgggagcgcagctgtattgaagatgtgtcagcaacagatgaagaattc
gataagtataagctacctatcttctttggcacgaacataacatgtacaggattggaaacg
gaaaagaaaaatgagataatgcgtttagtgaatgagaacggtggcacataccactgtgca
tttcgttcagcgctggtcgatatagtcattactgagaggggaaatacaaattccgacaaa
tataaggcagctgtgcgttacaagaaagatattctttgtcccgaatggatatttgatagc
gcagaaaaaggcttcgcgctgcctacaaagggctatcaagttaaatctttgaaggtatct
actccaattaaaggagatcgcagtattgcagatttcacgcagttgtcggatacatcacgt
ataagcgttatggctagttccgcgcgtgtcggatctatgactgttaatgacacaatttgt
agtggtttaaatgaaacagcaaaacaaaatgatgggacatttgtagcgccaactacccgt
ttaactggatcaaaagatttgcaaagggaagtacaccgcaagcagggagcagcagttcac
taccgtttggtgtatgaagagatatgtcccaagcaagcgaaaaaagctggtaattttctt
gatggatgctgcatttatttaagtggcttccgtttagaagagagggaaaagttaaataga
atacttaatgttgggggtgcaacgcgttatgatgtcgtgaatgagaaaattacacatatt
attgttggccaactagatgatggggagttacgcgcttggcaacgtgatggcatattgaca
actgtaaatattgttcgacttgattggctacttcaaagcattaagctgaagcaaccggcc
agcgaagtcgtttatcggatgtcacttccaacgacccgtgagccagacgcgccttcaccc
tccagcaaaaaaactttacgctctatgaataaaagtttcaaacaaccagataagccgaaa
aagaagctctttgaaccggaagagaaatctgccgaaacagcggagacaccctcagctgca
accgatttacccttagaagaagaagagcaacatctcattgcacagtattcacaagaaaat
gagccagcagttgcagtaccaaatcccattgtggccattaaaccaaacaatgttgcaatg
gattcaacattaactgcacccatggcttcgtcaactttaaaggcggtagtgaatatcgtt
cccccgcctgcatctactacattaactcagaatgagaattcggcaaagatcaacagtgaa
attgattttgataatttggacttcttcgatggcaagtctctgtacatcgatcgcgctcat
ttccctgaagaattctactcccaaatgctaagcgaatgcgaagcagcgcatggcgacata
gtaccgcccactttcgtagatatggttgactatgcaattgtgtcgtttgagcgcacgtta
aatgcacgcgagttgccggtcaaggcacgccacattgtaacggatctgtatgtggaaaac
tgcatgaaacaaaataaattggtgcccatagaatatttccatcgtcacgtgccgcacacg
gctaactcgcaacccctagaaggcatgactattgttatttccatatatactgctttggaa
tatgattttattgattctgtggcgcaattgctgggtgccactgtcaaccgcgtactggcc
aaaaaagaacgcccacttctaatttgcccacgcgcagaaggttctaaatatgagggggcc
attaagtggggttatcccgtagtgacatctgcatggctggtgcaatgcgctgtagaagga
aaaaaactaccatttcagcactacctagtgggcaacagtccatccgatttccctgtgtca
ccaactttgcgtgaaaaaaatttgcccaatccaacagtgtgcacacctgcaacttctgcc
attgaacctatggatacccaagaaaatgcagaaaatgatctcactaaaggagtgactgca
gcaaaagatttcactcctcttcgcaataaacgtgtcaccgaattggcagggtccttttct
cgaccatctgtgcccaatataacaagtaacactccaactacgcctgactctcctcatacc
cctacaaacacgtacggtcgttcttcctgtaattttgaatatttagagggtgttgtggct
gaactggataacgaagatgcgcgtgcttgtcttcgtgaactaatcgaagagatgcgcaac
aatcagacgcccgagttggaacgaatccgccgacaggcatgcactccaatcaatcgcaag
ttgcccacaccgaaaggaattccagatttttgcactacacccgaatttcaaaaacgaata
gctgatgcatttgaacgacgctggcgcttgccaacaaaaaaactaaaggttgacacacct
atagaagagttgcgacaccgtgtcgtggtatccacatgtgcggctctaggcgtcccattt
agtgataccgaagatacgcctatgaccagtgcccaagcagctatgaaagctttggctgca
acagcagaaatgtcggcattggcggcactaacgtcaaatacgtatataagtcccaaacgt
aaatctcctaacgcctcaaacaatgagtcgcgctatcaacaagcgggcgtagtgccacgc
gcaatctttgccacaagtttaaataacagtctgagcacaagcgcacaacgttcagcgcgt
gtttcagaaggcgatgcttttgtgccgagtactcaaacgcctaccagaagcggtagcttg
ggtgctgccgagtctcgaatggtgcagcacgcaagctttggcaaatcgacgttagatttt
gacaaaattagtttcgaaaacactgaaacggacactgtggcatcccatagcaaaaacacg
cataatcaaagtggtatccgctcagcatcggccctggccacatcatcaccagaactgcag
aaaatcactgagtatctcaaaaattgtgaatctcgcaggcagagcctaaaagaatcgagg
tgcacagctggtgtgggaaatgcaactggtagcggcatccctgagagtgcagacaatatg
gtcgataatatagaaacaggtgggccggcgtatggtgcaggagagacggaaacccaacat
tacgtgcaaccctttgaatcggaacaatttggcgtttgcactgaaaacatggttggttgg
cgcgaccctgtggagttcggcagggaaaggcgctcgaaggcatcaccaagcatgcagtac
aagggcacaccacgcttcagcatttcatgtgtagacgaggacatacgtaacgatgttatc
aacaaaattcataaactcggcggaactgtatctgagaatcttgtcaactttgaccctgat
tgtacacattttatttgcgaacggccaaatcgcggcgagaagatgctcggttgcgtctca
tcaggtaaatgggtgctcagcctcaaatatatagaagagtgttacgcaaaggatgttttt
gttgatgaggaactatatgaatggggcaacagcaaagcattaaatttgccacagttgaca
ccagatgagcagcttttgtccttggcggtgcatcgttggcgcaagaagctcaatggtgcc
acatctgctgatgggaagaagttgggagcctttagcggatttcgtattatacttcatatt
gctgaacgtaattcagaggcggtgaagaacgttttgcgtgccggtcatgccgaggtgttg
gcggtgcagtcgccattcagtgcgtgcagtgctgcgagaaatgtgacgcattgtttcgtg
gatgtgaaaaaagcaccactgacacgcgccgattatgaatacttgcgtacgcttggtgta
caaatctactcacaaatgtacattaacgcttatctaatgtatggcgaggatgtagatgcc
gccaagtatgaaatccaaattcaatag
DBGET
integrated database retrieval system
