Anastrepha obliqua (West Indian fruit fly): 129238015
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Entry
129238015 CDS
T09777
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoq03036
]
129238015
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129238015
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Meiosis-specific proteins
Others
129238015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Sec63
SNRNP200_wHTH
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
129238015
NCBI-ProteinID:
XP_054729018
LinkDB
All DBs
Position
2:91558311..91615789
Genome browser
AA seq
1505 aa
AA seq
DB search
MDIKTFADIPSPFGRIFEHLHSFNAVQSSLIDVLLHSNRSVVLSAPTGSGKTVAFELAIV
RMLLDHQLTGATSASQDLSNIMVTKAIYVAPIKALCAERFDDWKVRFGLIGVKCLLLTGD
SELDELTRLRSAQVIITTPEKWDSLTRHWRDCRDVISSVRLFLIDEVHLLNEDVRGPVLE
AVVSRMHTIARDTMEKPLRFVVASATIPNVQDITRWIAGAGASQSYSNKRAIDEQVTQLV
YSDSDRPVPLERHVLGFNSCMRGFKFDMTLNYKLTGILQKYSDRKATLIFCNCRKSAEMA
AAVLEKNVSTHFPLSDQQKENLAQLAQNLHDTKLRKLTAHGIAYHHAGMSLSDRHQIEDS
FRQGNLIVLLCTNTLAMGVNLPARLVIIKSTEYYHLGQMTEYPESTLLQMIGRAGRPQYD
TKGVAVILTHSRNVHKYETLMNGKMPIESHLHKHLAEHLNSEIALGTINNLEVAMKWMRS
TYFYVRSMQNPEHYGLEGNMDKDIIEHKLEKMCLVQIQDLQHAGLISRNPQNELDVETSS
YGKLMAKYYLCFETMKLFRQIRGDETLLRIFELIVRCREFNEFTLRVNEKRLLNALNGTP
LRFPRAGRIKTREDKISCLLQSELGNVPIASPTLAQESVKMIRIGDRIAKCLLEYMRLSE
HQAHAFDLGRYKALLHTVTIAKCFHAKLWENSEYAAKQLQKIGAVYSAQLVYAGKTTLKS
LEATDARTIEAILNKSYPFGDEILQNLQQAFPEYSLQLERDSQSMLHVCVRQVNEAFVCR
GTNAMVIIGDSANQLLLFIEDLDSLLLEYGCFMKTIKLPNPDVEKIHAHVIHATLVGVDV
HETLVLNEHPKESITTPKVKKCKKRKQQTGGVKTCNKRAKPNLSLSAICDATIDTTVTAK
SNSLLNLQSFTFSKSKISSDTHEKGQQEHFIRNMGDKNLVELKNNTEIEAVSPKKCDNSS
TLIQTKLTKYFTQTKVSTNKAVTGSTTSIQSKQSDIQFDKLKQNQDQSNIDRELTLKSSL
RATTPDLHDISAFLETQNSRTHERTENVDVIETHNISTPMNSHATENEALNEILYSAHLE
TQNSGKSYEITKVFQTIETDKISTIFNAQVLGSENLNGLEISAFLEPQTSRATYPATQNV
NEIVGPDYSEISGTQTLGRGISNSMQSKLANSRYFLSNEIKPLDLTKKIDLFHSQNQLDQ
GYFKSAGSTENFPISTVSAGKCNDEMCGLDLSRKTIDNFNMSWCDDTSPMSMSIAMSSKS
SGSLKNSPRSIENFLLCYKIALAFTRLKNEERTIVRFKNIYKRMWHTNEAIDYITAKLSN
SRISRGEEKKSMTEQRSLLTRRRRKDIFVGNPNKRTEVPLNLVQEIIGKNKAQSKVNGIS
IAAAKTAQLLQPKCVRISKGGTTVKKVSQSTRPETSTTFRNPFRLQISNDTNNKLTTAKQ
INNEVMNLVLDMKCRAIDNPEKIHPLEFVDYKAIERELELKESQDLPTMSFEEYCSYILQ
SPTKE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggacattaaaacgtttgcagacattccatcaccatttggtagaattttcgagcactta
cacagttttaatgcagtgcaatcttcgcttatcgatgtattgttgcattcgaacagatcg
gtggtgcttagtgcacccactggttctggcaaaactgtggcgtttgaattggccattgtg
cgtatgctactcgatcatcaactgacaggcgcgactagtgccagtcaggacctgagcaac
ataatggtaacaaaggctatttatgtggcaccgataaaagccctttgtgccgaacgattt
gacgattggaaggtacgttttgggcttataggcgtcaagtgtttactccttacaggtgat
agtgaattggatgaactaacacgactgcggagcgctcaagtgattattactacaccagag
aaatgggattcgctgacacgtcactggcgtgattgccgtgacgttatcagctcggtgcgt
ctctttcttattgatgaagtgcacttgttgaatgaagatgtgcgtggcccagtgctagaa
gcggtagtgtcgcgtatgcatacaattgcgcgcgatacaatggagaaaccgctgcgattt
gttgtagcttcagccactataccaaatgtacaggatataactcgttggattgctggcgcg
ggagccagccaaagttatagcaacaaaagagctattgatgaacaagtgacacagttggtt
tattcggactcagatcgtcctgtgccattggaaagacatgtgttgggcttcaattcctgc
atgcgtggctttaagtttgatatgaccctcaattataaattaaccggtatattacaaaaa
tattccgatcgtaaggctactttgatattttgcaattgtcggaagtctgctgaaatggca
gcagctgttttagaaaaaaatgttagtacacatttcccattaagtgaccaacagaaggaa
aatcttgcacaactcgcccaaaacttgcacgacactaaactgcgcaaattgactgcacat
ggcattgcttaccatcatgccggcatgagtctaagtgatcgccaccaaatcgaggatagc
ttccgtcagggtaacttaatagttttgctctgcaccaacactttggcaatgggtgtcaat
ttgcccgcacgtcttgtgatcatcaagtcaactgagtactatcaccttggtcaaatgacg
gagtatccagagagtactttactacaaatgattggacgcgctggacgaccacaatatgat
acaaaaggtgttgctgtgatcttaacacacagcaggaatgtgcataaatatgaaacgttg
atgaatggcaaaatgccaatcgaatcacatttacacaaacacctggcagaacatctcaac
tccgaaattgcgctaggtaccataaacaatctcgaggtagctatgaaatggatgcgctca
acatatttttatgtacgttcaatgcaaaatcccgagcactatggcctagaaggaaatatg
gataaggacattattgaacataaattggaaaagatgtgcttggtgcagattcaagatctt
cagcatgctgggcttatctcaaggaaccctcaaaacgaattggatgtagaaaccagcagt
tacggcaaactaatggccaaatattacttatgttttgagacaatgaaactttttcgacag
atacgtggcgatgaaacacttttaagaatttttgagcttattgtgcgttgcagagaattc
aatgaattcacactcagagtaaatgagaaacgtcttctaaacgctttaaacggcacacca
ttgcgttttccgcgtgcagggcgaatcaaaacgcgtgaagataaaatttcatgtttgcta
cagtcggaacttggcaatgtaccgatcgcttcccccactttggcacaagaatcggtgaaa
atgatacgcatcggtgatcgcattgcaaaatgtttgttggagtatatgcgattgtcggag
catcaagcgcatgcatttgatttgggccgctacaaggcgttactgcataccgtgacaatc
gcgaaatgcttccacgccaagttgtgggaaaattcagagtatgcagcgaaacaattgcag
aaaatcggtgccgtttactcagctcaactggtgtacgctgggaaaactacactgaaatca
ttggaggcgacagacgcgcgcaccattgaagcgatactaaacaaatcatatccctttggc
gatgagatattacaaaatttgcaacaggctttccctgaatattcactacaattggagcgc
gattcgcaaagtatgttgcacgtctgtgtgcggcaagttaatgaggccttcgtttgtcgt
ggcacgaatgcaatggttattattggtgattcggcgaaccagttgctgcttttcatcgag
gatcttgattcactgcttttggaatatggatgctttatgaaaactataaaactgccaaat
cccgatgtcgagaagatacatgcgcatgtcatacatgcaacattagttggtgttgatgta
catgaaacgctagtcttgaatgaacaccccaaagaatctataactacaccaaaagttaaa
aaatgtaaaaaaagaaaacaacaaacaggaggtgttaagacatgtaacaaaagggcaaag
ccaaatttatcactatctgcaatttgtgatgctacaatcgacactacagtaacagccaaa
agtaacagcttgttaaatttgcaaagttttacgttttctaagtcaaaaatcagtagtgac
actcacgaaaaagggcaacaggaacattttataagaaatatgggtgacaaaaatttggtt
gaattaaagaataatacagaaattgaagcggtatcgccgaagaaatgcgacaatagttct
acattaattcaaactaagttaacgaagtatttcacacaaacgaaggtcagcacaaacaaa
gcagttacgggatctaccacttcaatacaatcaaaacaaagtgatatacagtttgacaaa
ttaaagcagaaccaagaccaatcaaatattgatcgagaattaacacttaaatcctcgtta
agggccactacaccggacttacatgatatttccgcatttctagaaacacaaaactccaga
actcatgaaagaacagaaaatgttgatgttattgaaactcacaacatttctacaccaatg
aattcacacgcaacggaaaatgaagctttaaatgagatactttattctgctcacttggaa
acacaaaattcaggaaagtcttacgaaatcacgaaagtatttcaaactattgaaactgat
aaaatttcaacaatttttaacgcacaagtattgggaagtgaaaatttaaatggattagaa
atttccgctttcctggagccgcaaacatcaagagcaacttacccggccacacagaatgtt
aacgaaattgtaggtcccgactattctgaaatatcgggcacgcaaacgctgggcaggggt
atttcaaattcgatgcagagtaaattagctaatagtagatactttttaagcaatgaaatt
aagcctttagatttaactaaaaaaatagatttgtttcatagtcaaaatcagctagatcaa
ggatatttcaagtctgctggctcaacggaaaatttccctatttcgacagtctctgcaggc
aaatgtaatgatgaaatgtgtggtttggacttgtcgcgcaagactatagacaacttcaat
atgtcttggtgtgatgatacttctcctatgagcatgagcatcgctatgagcagcaaaagc
tccggttctttgaaaaatagtccaagaagtattgaaaatttcttattatgctataaaatt
gcattggcctttacacgtttaaagaacgaggagcgcacaattgtgagattcaaaaacatt
tataaacgaatgtggcatacaaatgaagcaatagattatataacggcgaaattaagtaat
agtagaattagccgaggtgaggaaaagaagtcaatgacggaacaaagatcattattaaca
aggcgcagaaggaaggatatatttgtaggaaatccgaataaaagaacagaagttccatta
aatttggtgcaagaaataatagggaagaataaagcacaatcaaaagtaaatgggatttca
atagctgctgccaagacagcacagctgctacagccaaaatgtgtgcgaatatctaaaggc
ggaactacagtaaaaaaggttagccaatccacaaggcctgagacgtcgactacgtttcga
aatccatttcgtttgcaaatatcaaatgataccaataacaagttaacaacagctaaacaa
attaacaatgaggtaatgaatttagtactcgatatgaaatgtagagctattgacaatcct
gagaaaatacatcctctggaatttgttgactataaagcaattgagcgggaacttgaactg
aaagaatcccaagatttgccgactatgtctttcgaagaatattgtagttatatacttcag
tcgccaactaaagagtaa
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