Anastrepha obliqua (West Indian fruit fly): 129238156
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Entry
129238156 CDS
T09777
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoq04121
]
129238156
Ubiquitin system [BR:
aoq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
129238156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
129238156
NCBI-ProteinID:
XP_054729167
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All DBs
Position
2:complement(54432032..54478198)
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AA seq
2080 aa
AA seq
DB search
YYHNPWCIRSSILANRNGNNGNGSGGGGSGGGSNAAGGGNGGEGSRRNGAGGGGGAAANV
AGGAGAAEWNPEEIDRFSFDDSDRFEEDSLCSWSSEPESLCNNWRGWKKPSSFGLTNPIA
SSTPASCAPRRSEVEGEVPSLTELAAHCVASYIPFELVEHVFPPVPEQLQLRIAFWSFPD
NEEDIRLYSCLANSSADEFNRGDQLFKTRAVKDTLQIGFHLSATVVGQTPRAHFNVAVTF
DRRRISSCNCTCTSPAYWCSHVVAVCLHRIHNPLEVCLRAPVSESLTRLQRDQLQKFAQY
LISELPQQILPTAQRLLDELLSSQPTAINTVCGAPDPTAGASVHDQTSWYLDEKTLHANI
KRILIKFCLPAPIVFSDVNYLTNSAPPAASEWSSLLRPLRGREPEGMWNLLSIVREMYRR
CDRNAVRLLEIITEECMMCDQILIWWFQTKLSLMMGSNGHGGGKHSNTHSNSTALQHACS
SLCDEIVVLWRLAALNPGLAPDERDMLHAQFTAWHLKILDRVVKCRMMPQSYSNKHQQNS
RSDAELFVGFKPAIEACYLDWEEYPIAGITHTHDTNPIYYSPFTCFKHTDSKSETNSGQV
NATQAVMANNKHYNYISSSTDHGMHAAFKQRHERPFRERFYISSSNNSSNSSSDSVHARL
HQGLGAVGVVGAPGGLMPSVADGLLSNVGVGNALSSVEASGLRMDAGTSGCGNGHGAGVP
GGGVTITSIRGPSAIADLPRLPMSSVSGSGGGGGGDGNRSSASSEGFCENEDFGGDSSSN
NLCAEGGQTLEPSHPGAVGVSGGIVGMAMRLEETGVPRGFEALGTIAVTDVPTMGTVGKS
GGSSYQTTTSLSSDTSSSTSSSSSNSSSSSMLMGAAGIDTTPELTAKSNSTKMAVPAVRR
MSKDESFSSSSDEFTAQDSPPVVKSNELTPVASTSAAAAASASAATPASTVASTPLTFNK
QTPAVNISHAKVAAFGSQPVASTSSAVQHATASVNEKPHIFSNVRPTEDAWDILLARAEG
LHAHGHGREACILAVRLAEEMLANPPNLMVELPQIPKRKGKNKNVNPISHHLTVLASSTL
SKCAFLCTVLSENSEHFHIAFRICLFALEMPRPPASTKPLEVKLANQEADILTLLKRIPL
NEPEVQVIRERAECLRSGTFKMRGEALLPINLATFIFDALAMTLVTVKEQRNRLMSMMYR
LPSDENLGFEAAVAALGLKANVSEAEHPLLCEGTRRQRGELALTLLCYYKDEPRKIAKIM
EKLLDREIHVLLKSPLLPSYYSSNPPVRTAASFMSRREDHEYSSGINGGAHNANFNDMFL
SDYGSVGGNSRPHSSTSAELELGMGALSVSSSLGGGSGTLTGAGGSCQAMGGPSGQAGVA
GGANSRSKDSRYKGKRAFPSIPNQPSEASAHFLFELAKNLLIKAGGNSSTSLFTQATTNQ
NHHGPHRALHMCAFQLGLYALGLHNWVSPNWLSRTYSSHVSWILGQAMEIGAPAISFLID
TWEGHLTPPEAAGMADRASRGWDNNMVYPAAELALSVLPHAAALNPQEIQRAILQCKEQS
DHMLERACITVENAAKGGGVYPEVLFQVARYWYELYGHTTPNNDHEQHDDHLDHSAASLS
ALIESHQHHEMQQQMQAQVQAQQQQQAPSGMVGPPPVMATGPPGGPNAPGQPGQVVVTTA
PQPFQQGVATLASIGLPPYPPYSFCQNLYHHNITTYPGNQMQMYISAGPPPPQAYPGYPP
PQTQPQNVPPLQPGGAAQPPPPYVHQASAPGSGFPPQIPPQQLPPQAYQAIQCGAAGAQQ
PGFPPQPGQGGPPQNMQQVAAAAAYYAQSAHQQGPPQHPSQAAAAASVAMAQHQMRQQQQ
QGVYPPFVQAPSIQQPSVHAAPPQPPVRQRHPHQFTSTQLRYLLAAYNVGMLAMETLARR
VHDDRPQAKYARNPPYGEDVKWLLRISKKLGTQYLHQFCICAVNSIVSPFVLHDVALDSA
HYLGRNNHQLVMQHLRSALTPLVQKCQQMYIQCIHQKLYHLTQADYEDFASIILAARAAF
QITPEGSGQFKDWLQSIKRSKSCKKELWTQINAALQSNSK
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
tattaccataacccttggtgtataagaagcagcatcctggcgaaccgcaacggtaataac
ggaaacggtagtggtggtggtggcagcggcggcggcagtaacgctgctggtggtggaaat
ggaggtgagggttcacgacggaatggcgctggcggtggcggcggcgcagcggctaacgtt
gcgggtggtgccggagcagctgagtggaatccagaggaaattgaccgttttagtttcgat
gattcggatcgtttcgaggaagactcgctttgcagttggagttccgagccagaatcgcta
tgcaacaattggcgtggttggaagaaaccctcgagtttcggcttgaccaatcctatagct
agttcaacgccagccagctgtgccccgcgtagaagtgaagtggaaggcgaggttccttca
ctcaccgagctcgctgcgcactgtgtcgcctcatacatccccttcgaattggttgaacac
gtgtttcctcccgtgccagagcaactgcaattacgtatagcgttttggagtttcccggat
aatgaagaggacatacgtctctactcgtgtttggctaatagctcagcggatgaatttaat
cgcggcgaccaactattcaagactcgcgccgtcaaagacacactgcaaattggctttcat
ttatcagccactgtagttggtcaaacaccacgtgcccacttcaatgtggcggttaccttc
gatcgtaggcgcatatcgtcgtgcaattgcacctgcacctcgcccgcctactggtgctcg
catgtggtcgccgtctgtttgcatagaattcataatcccctagaagtatgtttacgtgca
ccggtgtccgaatcattgacgcgcctacaacgcgatcaattgcagaaattcgcgcaatat
ttaatcagcgaattgccgcaacaaattctaccgacagcgcaacgtttgctcgatgagctg
ctcagctcacagcccactgccatcaatacagtgtgtggtgcgcctgatcccacagctggt
gcttctgtgcatgatcagaccagttggtatttggacgagaagacgttgcatgctaatatt
aagcgtattttaattaaattttgcctaccggcacccatagtttttagtgatgtaaattat
ttaacaaactctgctccaccggctgcttccgaatggagttcattgttgcgtccgttgcgt
ggtcgtgagccggagggcatgtggaatctattgtcgattgtacgtgaaatgtatagacgt
tgtgatcgcaatgcagtgcggctgctggagatcatcaccgaggaatgcatgatgtgcgat
caaatattgatatggtggttccaaacgaaattgtcgctgatgatgggttccaatgggcat
ggcggcggcaaacactcgaatacacattcgaattcgacggccctccaacacgcatgtagt
tcactgtgtgacgagattgtggtgttgtggcgtttggcagcgctgaatccgggcttggcg
cctgatgagcgtgacatgttgcacgcacaattcactgcgtggcatctgaagatactcgat
cgtgtagtgaagtgtcgcatgatgccacaatcgtacagcaacaaacatcaacagaattca
aggtctgatgctgagttgtttgttggcttcaagccggccattgaagcttgctatttggac
tgggaggagtatcccattgcgggcatcacgcatacacacgataccaatcctatatattat
tcacccttcacctgcttcaagcacaccgattcgaaaagcgaaacgaacagcggtcaagtg
aatgccacgcaggctgtaatggcaaacaacaaacactacaattacatcagctcatccaca
gatcacggcatgcatgcagcgtttaagcaacgtcacgagcgtccattccgcgagcgcttc
tatatttcgtccagcaacaactcgagcaactcatcaagtgacagcgtgcatgcgcgtcta
catcaaggtcttggtgcggttggtgtagtaggggctcccggtgggttaatgccctcggta
gcagatggtttattgagcaatgttggcgttggcaatgctttgagtagtgtggaagccagc
ggtctacgtatggacgctggaacaagtgggtgtggcaatggacatggcgcgggcgttccc
ggtggcggcgtcaccattaccagcattagagggccttcggctattgctgatttgccacga
ttgccgatgagtagtgtttccggtagcggtggtgggggaggtggcgacggcaaccgttcc
agcgccagcagtgaaggattttgcgagaatgaagactttggcggcgatagcagcagtaac
aacctctgtgctgagggtggacagacattggaaccatcccacccgggcgctgtaggtgtc
agtggtggaattgtaggtatggcaatgcgtttggaggagacaggtgttccacgtggattc
gaagcgctgggtacgattgctgtcaccgatgttccgactatggggaccgttgggaaaagt
ggtggctcttcatatcaaacaaccacttcgttatcatctgacacatcctcatccacctca
agctcctcatcgaactcatcctcctcttcgatgttaatgggagcagctggcatagataca
actcccgaacttacagcgaaaagtaatagcactaaaatggcagtaccggccgttagacgt
atgtcgaaagatgagtctttctcctcatccagcgatgagttcactgcacaagactcgccg
cctgtggtaaaatcgaacgaactgactcccgtggcgagcacatcggcggcagcagctgcg
tcagcgtcagcggcaacaccggcttctacagtcgcttctacaccattaacattcaataag
caaacgccggccgtcaacatttctcacgcaaaagtagcagcattcggtagtcaacccgta
gcatccacatcgagcgcagtccaacatgcgacggcgtctgttaatgaaaagccgcacata
ttttcgaatgttcgccccacagaggacgcatgggatatacttttggcgcgtgctgagggt
ctgcatgcacatggacatgggcgggaggcgtgcatattggcggtacgtctggcggaggag
atgttggcaaacccacctaacttgatggtggaactaccacagatcccgaaacggaaaggc
aaaaataagaatgtcaaccccatctcgcaccacctcactgtattggcatcctccactttg
tcgaagtgtgcattcctgtgcactgtattgtcggagaactctgagcactttcacattgcc
ttcagaatttgtttgtttgcgttggaaatgccacgtccaccagccagcacaaagccgcta
gaagtgaaactggccaaccaggaagcagatatcctcacgctactgaaaaggattccactt
aacgaaccagaggtgcaggttatacgcgaacgtgcggaatgtctgcgcagcggtacattc
aaaatgcgcggtgaggcattgctgcccatcaacttggctacgtttatcttcgatgcgctg
gccatgacgctggtaactgttaaggaacaacgcaatcgcttaatgagcatgatgtatcgg
cttccttccgacgagaatttgggattcgaagcagctgtcgccgcattggggctaaaagca
aacgtatcggaggcagaacatccgctcctgtgcgagggcacacgtcgtcaacgtggcgaa
ctagcgcttacacttctctgctactacaaggatgagcctcgtaagatcgcgaagatcatg
gaaaaattactggaccgcgagatacatgttttgctaaaatcaccgttattaccatcctat
tattcgagcaatccgccggtgcgcaccgccgcgtcgttcatgtcgcgccgtgaggatcac
gagtacagtagtggcatcaatggcggggcacacaatgccaatttcaacgatatgttcctc
tcagactatggctctgtgggcggtaatagccgcccacatagttcaaccagcgcagaacta
gagttgggcatgggcgcgctgagcgtctcatcttcgctaggcggcggcagtggtacattg
actggcgccggtggcagttgtcaagccatgggcggacctagcggtcaagcaggcgttgct
ggtggcgccaacagccgttccaaggatagccgttataagggcaaacgcgccttcccctcc
atacccaatcagccgtcggaagccagcgcgcatttcttgttcgagctagcaaagaattta
ctgattaaagctggtggaaattcatccacgtcacttttcacacaagccaccaccaatcaa
aatcaccacggaccgcatcgcgcgctgcatatgtgcgcctttcagctaggcctgtacgcg
ctcggcttacacaactgggtcagccccaactggctgtcgcgcacctattcttcgcatgtg
tcgtggattctgggccaagcaatggaaattggtgcaccggctataagttttctgattgac
acttgggaaggtcatttaacgccgcccgaagcagctggtatggccgaccgcgcctcacgt
ggctgggacaacaatatggtatatccggcggctgagctggcgctttccgtgttgccacat
gctgccgcactcaatccccaagaaattcaacgcgccatcctgcaatgtaaagaacagagc
gatcacatgcttgagcgcgcctgcatcactgtcgagaatgcagccaagggtggcggtgtt
tatcccgaagtgctgttccaagtggcgcgttactggtacgagttgtacggccacaccaca
ccgaacaacgatcatgaacagcacgacgatcatctggatcattcggcggcgagcctaagt
gcgctgatcgagtcgcatcagcaccacgaaatgcaacaacaaatgcaggcacaagtacaa
gcacagcagcagcagcaagcaccaagcgggatggtcgggccaccgccggttatggcaaca
gggcccccgggtggccccaatgcgcctggtcaacccggtcaggtggttgttaccacagcg
ccgcaaccgttccaacaaggtgttgccacactagcgtccattgggttgccaccatacccg
ccatatagtttctgtcaaaatctctatcatcacaacatcaccacttacccgggcaatcaa
atgcaaatgtacatttccgctggaccaccgccaccgcaagcatatccgggttacccaccg
ccgcaaacgcagccacagaatgtgccacccttacagccaggtggcgctgcccaaccgccc
cctccgtatgtgcaccaggcgtctgcgcctggcagtggatttccacctcaaataccgcca
caacaattgccaccgcaagcgtaccaggcgatacaatgtggtgcggcaggcgcacaacaa
cccggctttcccccgcaacccggtcaaggtggaccgccacagaatatgcaacaagttgca
gcagccgcggcatactatgcgcaatcagcgcaccaacaaggaccgccacaacatccctca
caagcggctgctgcagccagcgtggccatggcccagcaccagatgcggcagcaacaacaa
caaggcgtgtatccgccgtttgtgcaagcgccgtctatacagcagccgtcagttcatgct
gcgccgccacaaccgcctgtgcgccaacgacatccacatcagttcacctcaactcaattg
cgttatctgcttgccgcctacaacgtcggcatgttggccatggagacattggcgcgtcgc
gtacacgatgatcgtcctcaagcgaagtatgcccgcaatccaccctacggcgaagacgtc
aaatggctactgcgcatctcaaagaaacttggcacgcaatatctacatcaattctgcata
tgcgcggtcaattccattgttagtccgtttgtgctgcacgatgtggctctagattcggcg
cactatctgggacgcaacaatcatcagttggtaatgcagcatttgcgctcggcgctaacg
cccttggtgcaaaagtgtcaacagatgtacattcaatgcatacaccagaagttataccat
ctgacccaggccgattacgaggatttcgcaagcataatcttggcagcgcgtgccgcattt
caaatcacacccgagggcagtggtcagttcaaagattggttgcagtcaatcaaaagatcg
aaatcgtgcaagaaagagttgtggactcaaattaatgcagctttgcaaagcaattccaaa
tga
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