Anastrepha obliqua (West Indian fruit fly): 129238562
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Entry
129238562 CDS
T09777
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq04140
Autophagy - animal
aoq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129238562
04148 Efferocytosis
129238562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoq04131
]
129238562
Membrane trafficking [BR:
aoq04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129238562
Hops complex
129238562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4
zf_RING_Vps8
zf-RING_Vps41
zf-C3HC4_2
zf_RING_Vps8_fungal
GrpE
zf-rbx1
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
129238562
NCBI-ProteinID:
XP_054729597
LinkDB
All DBs
Position
2:complement(61131345..61135049)
Genome browser
AA seq
974 aa
AA seq
DB search
MSSFDEDNSWMQYKPNAKFLPVVEGKTAECPAAGTTDFENLETPIFSKRQITLRIPSIYK
GNLMHVAVNKNWLVCVLDTQQTILLRFFLPRALPPGEIALEKYLAGYAISKVFLDYTGHH
TLIPLVPQTPGLSADFLYIHANGPKVRRVEKFIGHEITSVAFNRYMGTESSTGPILLGTS
EGLIFETELVQDGSSPLYRKQLYDLGLGRTKYPITSLELLRLPNTNKYMVIATTTDSIYT
FQENAKSDDRYLQFIFANYVNGQQIHGPKIVDTEFGNSLLQLYGEPNEKLPKQWAWLCGS
GIRFGEISTEERSSNVLLGDNLISFDYKQYKYLSYEQRRQNAPRALALTEYHALLLYSDH
ITGICLLNEKVVYEEYFHEQMGKLLNLMRDPFTGIIYVYTEKFFFNFKITDEQRDIWRIY
LDKGQYDLAEIYAAEQPEHLDTVLTKKADAAFEKGDYNIAADFYAESSKPFEQVSLKFMK
LENKKPIIRYVKKRLAKLDNDPEKISVLVVWLIDLYLTQINYPRRSAQERAEWQSEFDEF
MQGARVADSARQNKEAIRNLLKEHADVHNIAQFAIANGDYEEVIEQQIGVEKFKDALHTL
TQQDNLQLYYKYCPILMEYVPHETIATLMSQGRKLDIKELIPTLVVQETEKHIDEIIKYL
EYAIYKLGETNQAVHNYIIHLYAKYKPSKVITYLENEGQDLSLIHYEINYAMFQCQQFNV
KVASVFLMCLNMMWAAAVELALTFDLKLAKETASKPPKEEDRERMWLAIAQHEIQGTNDV
KKALDLLKECDLLRIEDLLPFFSDFEKIDDFKETICAALKDYNQKILELKHEMDECDKQA
MRALKDLQNVRERSMRISAQECCSLCDSFLLVKPFFVFFCGHKFHSDCIEKQILPSLSSD
QSRRLAMLKQQLEALVTQSMAMDYNSDILLEQRAELKTEIEEIIAADCYFCGVMIEMIDQ
PFVADWDQVNVDWE
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttttgatgaggataatagctggatgcaatataaaccaaatgcgaagttcctt
ccagttgtggaaggcaaaacggcggaatgccctgctgcaggtacaacggactttgaaaat
ttggagacgcccattttcagcaaacgccaaataacgctacgcataccatccatctacaaa
gggaatttaatgcatgtggctgtgaacaagaattggttggtttgtgtgctcgacacacag
caaacgatattgttaaggttctttttgcctcgcgcgttgcctccaggagaaattgcattg
gagaagtacttagctggttatgctatttcaaaagtattccttgattacactggacatcat
acacttataccattggtacctcaaacacccggcttatctgccgactttctatacatacat
gcgaacggacctaaagtgcgacgtgtggagaaattcataggtcatgaaattacatctgtc
gcattcaatcgttatatgggaactgaatcctctacgggaccaattttacttggcacaagt
gagggtcttatttttgaaacggaactagtgcaagatggctcgtcaccgttataccgaaaa
caattgtacgatttaggtttgggacgtacaaagtatcccataacgagtttagagttacta
cgcttacctaatactaacaaatacatggttattgccacaacaacggattccatatacaca
ttccaggagaatgcgaaatcagatgatagatatcttcaatttatttttgccaattatgta
aatggtcagcaaattcatgggccgaaaattgttgatactgaattcggaaattcgctgctg
cagctatatggcgagcccaacgaaaaactgcccaaacagtgggcatggttgtgcggtagt
ggtatacggtttggggagatatccaccgaagaacgttctagcaacgttttacttggtgac
aatctcatcagttttgattataagcaatacaaatatctatcctacgaacagcgtcgccaa
aatgcaccacgagccctcgctttaaccgaataccacgcactattactctattcggaccac
attactggcatttgtctactaaatgaaaaagtggtttatgaggaatattttcatgaacaa
atgggaaaactactgaatcttatgcgcgatccattcactggcattatttatgtttacact
gaaaaatttttctttaacttcaaaatcacagatgagcaacgtgacatttggcgcatctat
ttggacaaaggacagtatgacttggctgaaatctacgccgctgagcaacccgagcactta
gacacggtgcttactaaaaaggcagatgctgcttttgaaaaaggcgattataatatagca
gcagatttctacgcggaatcatcgaagccttttgaacaggttagcttaaaattcatgaaa
ctggaaaataaaaaaccaattatacgctacgttaaaaaacggttagcgaagttggataat
gatccagagaagatatcggtattagtcgtatggcttatagatctctatttgactcaaatc
aattacccacgacgtagtgcgcaggaacgcgcagaatggcaaagtgaattcgacgagttt
atgcagggtgcacgcgtggcagatagtgctcgccaaaataaagaagccatacgcaatcta
ttaaaggaacacgccgatgtgcataatattgcacaatttgctatagccaatggtgattat
gaagaagtgattgagcagcaaattggtgtggagaaattcaaagatgcgctgcacacattg
actcagcaagataatctacaattgtactataagtattgtcccatacttatggaatacgta
ccccatgaaacgatagccactttaatgtcacaggggcggaaactggacattaaagaactc
ataccgacgctggtagtgcaggagaccgaaaagcatatagatgaaatcattaaatatcta
gaatatgcgatatacaagttgggtgaaactaatcaagcggtacataattacataatacat
ttgtatgcaaagtataagccatctaaggtgataacatacctagagaatgagggacaagac
ttaagtttgattcactacgaaataaattatgcgatgttccaatgtcagcaattcaatgtt
aaggtggcatccgtttttctaatgtgtttaaatatgatgtgggctgcagcggttgaattg
gcgctgactttcgatttgaagctggcaaaagaaacagcttcaaagccgccgaaggaggag
gaccgcgaaaggatgtggctggctattgcacaacatgaaatacagggcaccaatgatgtg
aaaaaagcactagatcttctaaaagaatgtgatttgctacgtattgaggatttacttcca
ttcttctccgattttgaaaagattgacgattttaaagaaactatctgcgcagcactaaaa
gactacaatcaaaaaattctcgaactgaagcatgaaatggatgagtgcgacaagcaggcc
atgcgtgcgctcaaagacttgcagaatgtgcgcgagcgcagcatgcgtattagcgcgcaa
gagtgttgcagtctttgcgattcatttctcttggtgaaaccattcttcgtgttcttttgt
ggccataaatttcacagtgattgcatagaaaaacagattttaccgtcgctaagcagcgat
caaagtcgccgactcgccatgctcaaacaacaactagaagctttggtgacacaaagtatg
gcaatggattacaactcggacattctgctagagcaacgagccgaattaaaaacagaaatc
gaagaaattattgcagctgattgttatttttgtggtgtaatgattgaaatgattgatcag
ccattcgtcgccgattgggatcaggtcaacgttgattgggagtaa
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