Anastrepha obliqua (West Indian fruit fly): 129238631
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Entry
129238631 CDS
T09777
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129238631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129238631
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129238631
U7-dependent histone pre-mRNA processing factors
129238631
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
RRM_Rrp7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129238631
NCBI-ProteinID:
XP_054729730
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Position
1:complement(155852916..155854605)
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AA seq
413 aa
AA seq
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MADKNSEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFG
FCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGDHCDP
DQAPEIITKTVASLPPEQMYELMKQMKLCIQNNPSEARQMLMLNPQLAYALLQSMVVMRI
VDPQTALGMLFKANQMPPVLGGNPLSGGVQSQNIQSSIMQQPQPQQPSQPPAMVGPPMPV
PGPNFSAMQGGDIDLRAINGPVLGGPGVMDPRQMDPRMARNIDQDMRAMPNPVPPPLMDP
RAQRQMPPQQGNPQPTFPTDPRQRQIDPRLRGNAGGPGVPGPTMSQQQQTAQQQLQNRLA
SNCGIPNDATDQEKAALIMQVLQLSDDQISQLPPEQRASILVLKEQIAKSTQR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaaattctgagcaaagcattatggataaatccatgagatccgttttcgtg
ggcaatattccgtatgaagcaacagaagagaagcttaaggagatcttcagtgaagtggga
ccggtcctatcgttaaagcttgtatttgaccgagaaagtggaaagccgaagggtttcggc
ttttgtgaatacaaggatcaggaaactgccttgagtgcaatgcgcaatctaaatggttac
gaaattggcggccgtactttgcgtgtggataatgcatgtacggaaaagtcacgtatggaa
atgcaacaactattgcaaggtccgcaagttgaaaatccctatggcgaccattgtgatcca
gatcaggcacccgaaattataaccaaaacggttgcatctttgcctccagaacagatgtac
gaactaatgaaacagatgaagctttgcatacaaaataatccttctgaagcacgtcaaatg
ttgatgttaaatccacaattagcatatgctttgctacaatccatggtcgttatgcgaatt
gttgatccacaaacagcgctgggaatgcttttcaaagcaaatcaaatgccaccggttctt
ggtggaaatcctttgtcaggtggtgtacaatcgcaaaatattcaatcaagtattatgcag
caacctcaaccacaacaaccatctcaaccaccagcaatggttggaccaccaatgcctgta
cctggtcccaatttcagtgcaatgcaaggaggagatattgatttacgtgccataaatggt
cctgtattaggtggacctggcgttatggatccaagacaaatggacccacgtatggcacga
aatatcgatcaggatatgcgtgctatgccgaatcccgtaccgccaccactcatggatcca
cgtgcacaacggcaaatgccaccacagcagggtaatccgcaaccaacattcccaacagat
ccacgacagcgtcaaatcgatccacgtctgcgaggaaatgctggtggtcctggagttcct
ggtccaacaatgtcacagcagcagcaaactgctcaacagcaactacaaaatcgtttagca
tcgaattgtggcattcccaacgatgctaccgatcaggagaaagctgctcttatcatgcag
gtcttacaactttctgatgaccagatttcgcaattgccgccagagcaacgtgccagcatt
ttggtacttaaagaacagatcgctaagagtacacaacgttaa
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