Anastrepha obliqua (West Indian fruit fly): 129238992
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Entry
129238992 CDS
T09777
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03030
DNA replication
aoq03420
Nucleotide excision repair
aoq03430
Mismatch repair
aoq03440
Homologous recombination
aoq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129238992
03420 Nucleotide excision repair
129238992
03430 Mismatch repair
129238992
03440 Homologous recombination
129238992
03460 Fanconi anemia pathway
129238992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoq03000
]
129238992
03032 DNA replication proteins [BR:
aoq03032
]
129238992
03400 DNA repair and recombination proteins [BR:
aoq03400
]
129238992
Transcription factors [BR:
aoq03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129238992
DNA replication proteins [BR:
aoq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
129238992
DNA repair and recombination proteins [BR:
aoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
129238992
MMR (mismatch excision repair)
129238992
DSBR (double strand breaks repair)
HR (homologous recombination)
129238992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
OB_MEIOB_N
IBR
Motif
Other DBs
NCBI-GeneID:
129238992
NCBI-ProteinID:
XP_054730227
LinkDB
All DBs
Position
1:159376318..159379001
Genome browser
AA seq
614 aa
AA seq
DB search
MAGIAPLSTGVIERIMRGEEVDKPVLQILGTKKITGGETDRLRLLISDGKFINSYSMLAT
QLNHLHAEGKLAEYTIVQVDKYITSVVNGKDAGKRVLIILELSVLNPGTVVGRKIGTPVS
YTEEAAAQSNKASSSSSNAAVKPPSAAANNANRNDKKATLYNNNNSSFSQDLNSGLTSPI
SSLSPYHNKWVIKARVTAKSPMRTWSNAKGEGKLFSMDLMDESGEIRATAFREQADKFYD
IIEVDHVYYISKCQLKPANKQFTSLKNDYEMTLTGETMIQACEEDDNDIPEIKYDLVPIS
QVANLEPRTVVDTIGVCKEVSELQTFTSRTTNKEFKKRELTLVDASNAAVNLTLWGDEAV
NFDGYVQPVILVKGARVTEFNGGKSLSMGNGTVMKINPDISEGHKLRGWFDNGGGEHISN
MISTRTGGAGGGFSTEWLTFHEARDRNLGAGDKADYFQCKGVVHIVKSQNAFYKACPQAD
CNKKVIDENNGHYRCERCNAVFPNFKYRLLINMSVGDWTSNRWVTCFSEVGEQMLKRSAQ
EIGDLLENNPPEGEEVLSSINFNSYIFKLRSKMEMFGDMQRNKLTVQSVAPVDYKEYNKY
LINNLKELTGINKN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggccggaatagctcctctgtctaccggtgttattgagcgtattatgcggggtgaggaa
gtggataaacctgtcttgcagatactgggcaccaagaagattaccggcggtgaaacagat
cgtctccgtttattaatttctgatggaaagtttatcaacagttattccatgttggctacc
caactcaaccatttgcatgcagagggcaaacttgccgagtacactatagtccaagtggac
aagtatataacatctgtggttaatggcaaagatgccggcaaacgggtattaatcatactg
gagttaagcgtactaaatccagggacggttgtcggtagaaaaattgggacgcccgtatcg
tacacggaagaagcagcagcacaaagtaataaagctagttcgagcagcagtaatgctgcc
gtgaaaccgcccagtgctgctgcaaataacgcaaacagaaatgacaaaaaagcaacacta
tacaacaacaataacagctcattcagtcaggatttgaattcaggacttactagtccaata
tctagcttgagcccataccacaataaatgggttattaaagcacgcgttacagctaagagc
cccatgcgtacgtggagtaatgcaaagggtgaaggaaagcttttcagcatggatctaatg
gatgaatctggagagattcgcgcgaccgctttccgcgagcaggctgacaaattttacgat
ataattgaagttgatcatgtttactatatatcgaaatgccaacttaaaccagcaaataaa
cagtttacctcattgaaaaacgactacgaaatgacgttgactggcgaaacaatgatacaa
gcatgcgaggaagatgataatgacataccagaaatcaagtatgatttagtacccatatcg
caggtggcgaatctggaaccacgcacagttgtcgatacaattggagtatgcaaggaagtt
agtgaattgcaaacctttacttctcgcacaaccaataaagaatttaagaaacgtgagctg
acactcgtcgatgcgagcaatgcagctgtgaatttgaccttatggggtgatgaagcagtt
aactttgacggctacgtacaaccggtgattttggtaaaaggtgcacgtgtgacggagttc
aatggcggcaaaagcctaagcatgggaaatggtactgtaatgaaaattaaccccgacatt
tcagaaggtcataaattgcgtggctggttcgacaatggcggtggtgaacatatttcaaat
atgatttcgaccagaaccggcggtgctggtggcggcttcagcaccgaatggttgacattc
cacgaagcgcgtgaccgaaatttgggcgcgggcgataaggcggattactttcaatgcaaa
ggtgttgttcatattgtcaagagtcaaaatgcattctacaaggcttgcccgcaggcggac
tgcaataagaaggtcattgacgagaacaatgggcattatcgttgcgagcgttgtaatgct
gttttccccaatttcaaatatagactactaattaatatgagcgttggcgattggacctca
aaccgctgggttacttgcttcagcgaagtgggtgagcagatgctgaagcgttcggcacag
gagattggtgatcttttagaaaacaacccacccgaaggtgaagaggtgctctcgtcgatc
aacttcaattcatacatttttaaattgcgcagtaaaatggaaatgtttggtgatatgcaa
cgtaataaattgaccgtacaatcagttgctccagtagactacaaggagtataacaaatat
ttgataaacaacctgaaggagttgaccggtattaataaaaattaa
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