Anastrepha obliqua (West Indian fruit fly): 129239021
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Entry
129239021 CDS
T09777
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129239021
03036 Chromosome and associated proteins [BR:
aoq03036
]
129239021
Spliceosome [BR:
aoq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
129239021
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
129239021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
NRDE-2
HAT_PRP39_C
RRM_occluded
HAT_Syf1_CNRKL1_N
RRM_7
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
129239021
NCBI-ProteinID:
XP_054730261
LinkDB
All DBs
Position
2:complement(40737538..40741491)
Genome browser
AA seq
952 aa
AA seq
DB search
MSSPGENTQVTTKENVAEMEEIDEAEEEALLKSDDEYDTVRTKIQPVLSALAPPAAVLTD
EDSLMNEAVQLQDDAAGADAGLSDEDEVMTEAQEVLARQLKGDGLDSDSDEDDDESDEAE
KALVAYKKLIKELEVNQYVYDKYVQLCELAHTTDDLDIIREAYKRFSTAYPLSQDLWLKY
LSVEMNVALSPKEMEFVEGLFRKALDDYYSTTIALEFASIAPRCADPEKIWRELLGTYGL
HCLDGQQFFKLYREFLTAHNSMSSEAKQEAYIKSYLQELKYPLFNMEESYIEFKVFYEKN
KEQIKHEMSWELIDKNYFKAKDHLRKILHFEQKLKELDVKCYRERAEVYITYIKESDKFL
DENVLQTVYERMVADCCLNIDCWLTYIDFIAYRDAYGRPEELQDLPTFRQTAVDVNKRAL
RNCTWSEKLYVKYMLLLEQMGRSREEVQEILESAMSAGFQTAESAVTVWMEYLTYLRRHT
DYENEDECDILRKNFNLAWTILGQQWGVLADCNCEILLLWGRLEYGPLSDAKRGKELWTT
AMESSDNATRSGLWIEFAHLELRRDLEATRKLYRKALHSPGLDNPSVIAAAWERFERCNG
TTKTLNNCTKECTEFLIQYHAQMSQFKTDTMTSMKGNKATKRKTTAATEFTVPEKKSRTE
EKKQDMQPSGSGGGGGIGDLPGPKRLESATFKEHENQEIDLSKDHLRIFLSNLDYSLTED
DIRTELRDLKVVNVTLIRSGNGKSRGFGYVELENAVEVEKALSLDRISLKGRPLYISSVL
RDKEKRQKFKYSDDLEPKKLFVKSLPNDTKKEELEEIFGAFGKLQDVRLVYHKSGKFKNI
AYVEFKEEAAAGKAVLGTDQLELRGHSISVAISAPPPKSATSAINTNKLLGLSNKRSKAF
EQKPRMSLIPTAVRKQFTTALDSKISHTVNNKSTNGAALSKTNDDFRKLLQK
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgccaggagaaaatacacaggtcactacaaaagaaaatgtagccgaaatggag
gaaatagatgaggcagaagaggaagctttattgaaatctgacgacgagtatgacactgtg
cgtacaaagatccaaccagtattgagtgctttggcgcctccagcagcagtactcacagat
gaagattcactcatgaatgaagcagtacaattgcaagacgatgcagcgggagcggatgcc
ggcttgagtgatgaggatgaagtaatgactgaagcacaggaagtcttggcacgacagctt
aagggagatgggctcgatagcgatagtgatgaggacgacgatgaatcggacgaagcggaa
aaagcacttgtggcatacaaaaagttaattaaagagctggaagtaaatcaatatgtttac
gataaatatgtgcagctctgcgaattagcacacactacagacgatctggatattatacgg
gaggcatataaacgtttttctactgcatatcccttgtcacaagatttgtggcttaagtat
ttaagcgttgaaatgaatgtggcgttatcgcccaaagaaatggaatttgttgagggccta
tttcgaaaagctttggatgactattactcaacaaccattgcgctggagtttgcatcaata
gcgccacgttgtgccgatcctgaaaagatatggcgtgaactgttaggcacttacggactg
cactgccttgatggccaacaattttttaagctatatcgcgagtttctcacagcccataat
tctatgagttcggaagcaaagcaagaggcgtacatcaaaagttatttgcaagaactaaaa
tatcccctctttaacatggaagagagctacatagaatttaaggttttctatgaaaagaac
aaagagcagataaagcatgaaatgagttgggaactcatcgacaaaaattactttaaagct
aaggatcacctgcgcaaaattttgcacttcgaacaaaaacttaaagaactggatgtcaaa
tgttaccgcgaacgtgcggaagtgtatataacttacatcaaagagtcggataaattcctt
gatgaaaacgtattgcaaacagtgtacgaacgcatggttgccgattgctgcttaaacata
gattgctggctaacatatattgacttcattgcataccgcgatgcatatgggcgtccagaa
gagttacaagatttacccacctttcgccaaaccgcagtggatgttaataaacgcgctctg
cggaactgcacgtggtcggaaaagctatatgtaaagtacatgctactgctggaacagatg
ggtcggtcgcgtgaggaggtgcaagaaattttggaaagcgcaatgtcagctggttttcaa
accgctgagtctgctgtgactgtttggatggagtatttgacatatttgcggcggcacacg
gactacgagaatgaagacgagtgcgatattttgcggaagaatttcaatttagcctggaca
attctcggccaacaatggggtgtcttggccgattgtaattgtgagatattattactctgg
gggcgtctagaatatgggccactatccgatgcgaaacgcggaaaagaactttggactacc
gccatggaaagttccgacaacgcgacgcgttctggtctgtggatagaatttgcgcactta
gagctacgcagagatttggaagcaacgagaaaattgtaccgtaaagcactgcattcaccg
ggtcttgacaatccatcagttatcgctgcggcttgggaacgcttcgaacgttgtaatggc
actacgaaaactcttaataattgtacaaaagaatgtaccgaattcttaattcaatatcat
gcacaaatgagccaatttaagacggacactatgacaagtatgaagggtaataaagctaca
aagcgcaagacaacagctgccactgagttcactgtgccggagaagaaatcaagaacggaa
gaaaaaaagcaagacatgcaaccgagtggtagtggcggtggcggtgggattggtgatctg
cctggaccaaaacgccttgaatccgccacattcaaagaacacgaaaatcaagaaatagat
ttgtcaaaagatcatttacgtatattccttagtaatttggattacagtttaactgaagat
gatattcgtaccgaattgcgagacttaaaagtggtaaatgtgacactcatacgctctggg
aatggcaaaagtcgcggttttggctatgtagaactagagaacgcggttgaggttgagaag
gctttgtcgctggatagaatttctttgaaaggtcggccattgtacatatccagtgttttg
cgagataaagagaaacggcaaaagttcaaatattcagatgatttggaaccaaagaaactt
tttgtaaaaagcctgcctaatgacaccaaaaaagaagagttggaagaaatttttggagca
tttggaaaactgcaggatgttcgcttagtatatcacaagagtggcaaattcaagaatatc
gcttacgtggagttcaaagaagaggcagcagctggcaaggccgttcttggtactgatcag
cttgaactgcgcggtcattcgatttcagtggcgatctcggcaccaccacctaaatctgct
acttcagcgataaatacaaataaacttctgggtttgagcaacaaacgtagcaaagctttc
gaacagaagcctcgtatgtcgctcataccaacagcagtgcgcaaacaatttactactgcg
ctggattctaaaatctcacatacagtaaacaataaatcgaccaatggagcagctctgtca
aaaacaaatgatgattttcgcaaattattacagaaataa
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