Anastrepha obliqua (West Indian fruit fly): 129239176
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Entry
129239176 CDS
T09777
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoq03036
]
129239176
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aoq00535
]
129239176
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
129239176
Meiosis-specific proteins
Cohesin complex and associated proteins
129239176
Proteoglycans [BR:
aoq00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
129239176
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
DUF4898
HAUS1
AAA_29
Motif
Other DBs
NCBI-GeneID:
129239176
NCBI-ProteinID:
XP_054730487
LinkDB
All DBs
Position
2:99882254..99906260
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AA seq
1200 aa
AA seq
DB search
MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQ
RQALLHEGTGARVISAYVEIIFDNSDNRVPIDKEEIYLRRVIGSKKDQYFLNKKVVPRTE
VVNLLESAGFSNSNPYYIVKQGKINQMATAADSYRLKLLREVAGTRVYDERKEESLNILR
ETEGKLEKISEYLRTIEDRLKTLEEEKEELKEYQKWDKARRMLEYIIHETELKETKKALD
DLNEQKKSSVDKKKIYNIEIQKAQENIKDIQKRLKDAKKDVISTKEERSVLLTEQQQLLR
EKTKLDLIIIDLNDEVQGDNKSKERADLELKKLKITIAEKERELDDVKPKYEAMKRKEEE
CSRELALKEQKRNELYAKQGRGSQFSSREERDKWILNELKSLSKQIRDKINHNTKLVEDL
KKDSNAEADLNRKIEEHSNELEQLRLQIDEHNKKYYELKKTKDQFQAMRNELWRKETQMT
QQLQTHKEELSKTDQALRSMAGKPILNGRDSVRKVLDNFFERGSPFAEIAKSYYGPVIEN
FSCDKTIYTAVEVTAGNRLFHHIVESDKVGTQILKEMNKLKLPGEVTFMPLNRLQVKIHD
YPDDPDSIPMLSKLKYDEQHDKALRYIFGKTLICRNLERATELAKSTGLDCVTLDGDQVS
SKGSLTGGYFNTSRSRLEIQKKRTEYTQQIRDFEKELGKLRNEIKQTENSINSVVSEMQK
TETKQGKTKDIFEKLQGEIRLMKEELLRIEKYRSTRERSASQCKSSLEAMNSTKAGLEAE
LNQELLSSLSVQDQREIDQLNEDIRKLNQENKEAFTQRMQLEVVKNKLDNLLTNNLFRRR
DELITALQEISVEDRKRKLINCKNDLISTEKRIKKVNLDLEDIEKRVQQAVHLQKTLQHE
LENWMRKEKEAEEKINEDSKKMEKWTSKEILLNQKLDECAEKIASLGALPQVDGVYSKMS
LKSLFKELEKANQHLKKYNHVNKKALDQFLSFSEQKEKLYKRKDELDVGDQKIRELMRTL
EMQKVEAIQFTFKQVAQNFTKVFKKLVPQGAGYLILKTKDNEDEKDDKEVANSDAFTGIG
IRVSFTGVDAEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAV
ADMIHELSDQAQFITTTFRPELLENAHKFYGVRFRNKVSHIDCVTKEQAKDFVEDDNTHS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgcatattaaacagattataatccaagggtttaaaagctacaaagatcaaactgtggtt
gagccctttgacaaaaggcacaatgttgttgtgggtaggaacggatcgggaaagagcaat
tttttttatgcaatacagtttgtccttagtgatgaatttactcatctccgcccggaacaa
agacaggcactcttgcacgaaggaaccggagctagggtgatttcagcatacgtggaaatc
attttcgataatagtgataatcgggttccaatagataaagaagagatatatctacggaga
gttattggttctaagaaagatcaatattttcttaataaaaaagtagttccaagaactgaa
gttgtgaacttgctcgaatctgctggattttcaaactccaatccttactacatcgttaag
caaggcaagatcaatcaaatggctacagccgcagattcatatagattaaaattattgcgg
gaagtagctggcacgcgagtttatgatgaaagaaaagaagagtcactcaatattttgcgt
gaaaccgaaggaaagctcgaaaaaatatctgagtatttgagaactatagaggatcgctta
aaaactttagaagaggaaaaagaggagttgaaggaataccaaaaatgggataaggcaaga
cggatgctagagtatataatacacgaaactgaattaaaagagaccaaaaaggcgctcgat
gacttaaatgaacaaaagaaatcgtctgtcgataagaaaaaaatttataatatagaaatc
cagaaggctcaagaaaacataaaggacatccaaaaacgcctgaaagatgctaaaaaagat
gtaatatcaacgaaggaagaacggtcagtattgttgacagaacagcaacaacttctgcgt
gaaaaaacaaagcttgaccttataataattgatctgaatgatgaggttcaaggtgacaat
aaatcaaaggaaagagcagatcttgaattaaaaaaattaaaaataaccattgctgaaaaa
gaaagagagttggatgatgttaaacctaaatatgaagctatgaagcgtaaggaagaagag
tgttctcgcgagcttgccttaaaggagcagaaaagaaacgagttgtatgcgaagcaaggt
cgagggtcgcagttctcgtcaagagaggaaagagacaaatggattttaaatgaattaaaa
tcactaagtaaacaaataagagacaaaataaatcataacacaaaattagttgaagacttg
aaaaaagatagtaatgctgaagccgatcttaaccgaaaaattgaagagcattccaatgag
ctggagcaacttaggcttcaaattgatgagcacaacaaaaagtattacgaattgaagaaa
acaaaagaccagtttcaagcaatgagaaatgaattgtggcggaaagaaactcaaatgaca
caacagctacaaacccacaaagaagagctttctaaaacagatcaggcacttagaagtatg
gctggaaagcctatattaaacggccgagattctgttcgcaaagttttggacaattttttt
gaacggggaagtccttttgctgaaatagccaaatcctattacggcccagtgattgaaaac
tttagttgcgataagacaatatatacagcagtagaagttacggctggaaataggttattc
catcacattgttgaatctgataaggtcgggacacaaattttaaaagaaatgaataaactt
aaactgccaggagaggtaacattcatgcccctaaatcgtttacaggtaaaaatacatgat
tatcctgatgatccagattctattccaatgctctcaaaactcaaatatgatgaacagcat
gataaagcattaagatatatatttggaaaaactttaatatgtagaaatttagaaagagcg
actgagttggccaaaagtactggattagattgtgtcactttagatggggatcaagtatca
tctaaagggtccttaacaggtggctatttcaatacgtctagatcacgtcttgaaatacaa
aagaaacgtaccgaatacacccaacaaatacgcgattttgaaaaagagcttggcaagcta
cgaaatgagataaaacaaactgagaatagtattaattcagttgtttcagaaatgcagaaa
acagaaacaaaacaaggaaaaactaaagatatttttgaaaaactacaaggggaaatccgt
ttgatgaaagaagaactattaagaattgagaaatatagatcaacaagagaaaggtctgct
agtcaatgcaaatcgagtttagaagcaatgaatagtacgaaagcgggattggaagctgag
cttaatcaagaactgttatctagtttgtcggtacaggaccaacgagaaattgatcaactt
aatgaagacataagaaaactgaatcaagagaataaagaagcattcacgcagagaatgcaa
ttagaagttgtaaaaaataaacttgacaatctcttaaccaataatctttttcgaagacga
gatgaattgattacagcacttcaagaaatatctgtcgaagatcgaaaacgtaaacttata
aattgtaagaatgacctaatatctacagaaaaaaggataaaaaaagtgaatctggacttg
gaggacattgagaaaagggttcaacaagcagttcatcttcagaagactctacagcatgag
ctcgagaattggatgcgaaaggagaaagaagcggaagaaaaaattaatgaagattccaaa
aaaatggagaaatggacatcgaaggaaattttactaaatcagaaattagacgaatgcgcc
gaaaaaatagccagtttaggtgctctaccacaagttgatggtgtttatagtaaaatgtca
ttaaaatcgctttttaaggagcttgaaaaggcgaatcaacatctgaaaaaatataaccat
gtaaataaaaaggctttagaccaatttctcagtttttctgaacaaaaagaaaaactgtat
aaacgaaaagatgaactagatgttggagatcaaaagattcgggaactaatgagaactctt
gaaatgcagaaagtggaggccattcaatttactttcaagcaagtcgcacaaaatttcacc
aaagtatttaaaaaactagtaccacaaggtgcaggttatttaatacttaaaacaaaggac
aatgaggatgaaaaagatgataaagaggtggctaattctgatgcatttactggcataggt
attcgtgtgtccttcacaggagtggatgcggaaatgcgtgaaatgaatcaattatctggt
ggtcaaaaatcgttggttgcgctggcattaattttcgcaattcaaaaatgtgatccagct
ccgttttatttgttcgatgaaattgaccaggcgctcgatgctcaacatagaaaagcggtc
gcagatatgatacatgaattaagtgaccaggctcagtttataacaacaacatttaggcca
gaacttctagagaatgctcataagttctatggcgttcgttttcgaaataaagtcagtcac
atagattgtgttaccaaggagcaagcaaaagactttgttgaagatgataatacccactcc
tag
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