Anastrepha obliqua (West Indian fruit fly): 129239196
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Entry
129239196 CDS
T09777
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129239196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129239196
Spliceosome [BR:
aoq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129239196
Complex C
U4/U6.U5 tri-SnRNP related factors
129239196
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
129239196
NCBI-ProteinID:
XP_054730509
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All DBs
Position
2:complement(133920153..133922308)
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AA seq
365 aa
AA seq
DB search
MDEEYHQQPSAAKKIGKQHNTLPLWGNEATMNLNPLILANIQGSSYFKVHLFKLKTYHEV
VDEIYYQVKHMEPWERGSRKTSGQTGMCGGVRGVGAGGIVSTAYCLLYKLYTLRLTRKQV
NGLLNHTDSPYIRALGFMYLRYTQPPADLYDWYEDYLQDEEEIDVKAGGGQTITIGQMVY
QYLTKLDWFSTLFPRIPVPIQKQIEKKLEEYCRNNNTSPQQLSSARNSASNSGAATFDYE
DTGYDRRSGGASSSRSRLPPASSGNYRDEHDDRDHFANSVQPRRRDDSPSNEYHSSRDRD
HHREKHKKKHKHKHHSRSRSRSPSRSERKRDLEYDRGWERERDRDRNRDRDYERRGRDYD
DRRYR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaatatcatcaacaaccttcggcggcgaagaaaatcggcaagcaacataac
actttgccgctgtggggaaatgaggccaccatgaacttaaacccgcttattcttgcgaat
atacagggctcaagctatttcaaagtgcacttgttcaaacttaagacttaccatgaagtt
gtggacgagatttattaccaagtgaaacacatggagccttgggagcggggatcacgcaaa
acgtctggtcaaaccggcatgtgtggcggagtgcgaggagtcggcgctggcggtatagta
tcaacagcatactgcctgttatataagttatacacacttaggctgaccagaaagcaggtt
aacggactcctaaatcacacagattcaccctatataagggcactaggatttatgtacctt
agatatactcaaccgcccgcagatttgtatgactggtatgaagattacctgcaggatgag
gaagagatagatgtaaaggctggcgggggacagactattacaattggacaaatggtatat
cagtatcttaccaagttagattggttctctactttatttccacgtattccggtgccaata
caaaagcaaatagagaagaaattagaggaatattgtcgaaacaacaatacaagtccacaa
cagttgagttcagcaagaaactctgcgtccaatagcggagctgcgactttcgattatgag
gatacaggctatgatcggcgtagcggtggcgctagtagcagtcgaagtagactaccacca
gctagcagtggaaattatcgtgacgaacatgatgaccgcgaccacttcgctaatagtgtt
caacctagaaggcgcgatgattccccatcgaacgaatatcatagcagtagagatcgagat
catcatcgcgagaaacataagaaaaagcataagcataagcatcattctcgaagtagaagc
cgtagtccaagtcgtagtgaacggaaaagagatttggagtatgatcgtggttgggaacgt
gaacgtgatcgagacagaaatagagacagagattatgaacgtcggggccgtgactatgat
gatcgacgttaccgataa
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