Anastrepha obliqua (West Indian fruit fly): 129239423
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Entry
129239423 CDS
T09777
Name
(RefSeq) uncharacterized protein LOC129239423
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129239423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129239423
03009 Ribosome biogenesis [BR:
aoq03009
]
129239423
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129239423
Spliceosome [BR:
aoq03041
]
Complex A
U1 snRNP components
U1 related factors
129239423
Complex B
129239423
Ribosome biogenesis [BR:
aoq03009
]
Eukaryotic type
Pre-60S particles
Helicases
129239423
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
BAF1_ABF1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
129239423
NCBI-ProteinID:
XP_054730869
LinkDB
All DBs
Position
2:42146717..42159626
Genome browser
AA seq
913 aa
AA seq
DB search
MYAGGYAVNAGSPQANSNGFYGGGGVGAGPRPERPHYQRSAINNGNNTGLPYGGGSGLYG
GAQSSYRGGNNSNSMMTSGGPSFYGNGVATPGGYQARGKNPNFVPRHQKPNGGYLPNNGG
YHGGVNLGLLSKEERAELQREKAKNPGRNLQIPRWENLQPFKKNFYVPHQNTLNMSEQAV
AELRNDLEITVSGNGIPHPVSSFEECSLPEYTIEEMKRQGFTKPTAIQAQGWPIALSGRD
LVGIAQTGSGKTLAYMLPAMVHIANQPPLQRGEGPIALVLAPTRELAQQIQSVVRDYGHL
SKPEIRHTCIFGGSSKIPQARDLERGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEAD
RMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALAGDFLKDYISINIGSMNLSANH
NIRQMVEICQESEKPQRIVKLLKEIAPTTNNAANNNNKIIIFVETKIKVEEILQIIRNEG
YTATSIHGDKSQPERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENY
VHRIGRTGRCQQLGTAYTLFTPDNGKQARDLISVLEEAGQVPPPALLDLARSSGGNGNGR
GNNNRRWQQQIPHQQRSNPLNYQAGNNPNGTYAPKQTQYQQQNSGIYQQHNSVGSASGGG
SWNNRSGVVSSGTGGQYNGQDANGGRTYRPRAPFNAGGPRPMMGYMPPHMQQNSGFMPQQ
QYRPRGQQFIPQQNGNVPRFQQYQKREYNPQHYDKQQQQQQNVVTNSGGGSVEHQQHNGV
MNGAAVATIQQQQQQQHQQQVNVAANIAAAVAAAGGQLGGEYPSNVSTPPAAALYAAPAQ
SPPTAAANTATAYMYDASGVLAAAAAAAAANPYGGLPPHATAAFYPHPHQFAAGVAPATA
ADVLQQQQQQQRA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaggtggttatgcagtaaatgccggaagtccacaggccaattctaatggattt
tatggcggcggcggggtcggtgctggtccacgacctgagcgacctcactatcagcgaagt
gctatcaataatggcaacaataccggtttgccatatggcggtgggtctggattgtatggt
ggtgctcaaagctcttaccgtggtggcaacaactccaattccatgatgacaagtggtggt
ccgagcttttacggtaacggtgttgccacacctggaggttatcaagcgcgtgggaaaaat
ccaaatttcgtaccacgtcatcaaaaaccgaacggcggctacctaccaaacaatggcggc
taccatggtggtgttaatttaggattattgagcaaagaagagcgagctgaacttcagcgg
gaaaaggcaaaaaatcctggacgtaatctacaaatcccacgttgggaaaatttacaacct
ttcaagaagaatttctatgtaccacaccaaaacactttgaatatgagtgaacaagctgtt
gctgaacttcgcaatgatttagaaataacagtatccggcaatggcataccacatccagta
tcttcattcgaagaatgttctcttccagaatacaccattgaagagatgaaacgtcagggc
ttcaccaagcccactgctattcaggcgcaaggctggccaattgcactctctggtcgggac
ctagttggtattgctcagacgggttctggtaagacattagcatatatgttacctgctatg
gtgcatatcgcaaatcagccaccattgcaacgtggggaaggtccaatagccttggtgttg
gcaccaacacgtgaattggcacagcaaatacaatccgttgttcgtgattatggtcacttg
tctaagcctgagatacgacatacttgcatttttggcggttcatcgaaaattccgcaagca
cgtgatttagaaagaggtgttgaagtgattatagctacaccaggacggctaatcgatttt
ttggagaataggaacacaaatctacaacgttgtacgtacctggtactggacgaagcagat
cgcatgcttgacatgggttttgaaccacagatacgtaagataattgaacaaattcgtcct
gatcgtcaagtagttatgtggtccgcaacttggcctaaggaagtgcaagcactggctgga
gatttcttaaaagattacatttccataaatattggatcgatgaatttgtcagctaatcac
aacattcgtcaaatggttgaaatttgccaagaatcggagaaaccacaacgcattgtcaaa
ttgcttaaagaaatagcaccaacaaccaataatgctgctaataataataacaagattatt
attttcgtcgaaacaaaaataaaggtcgaggaaattttacaaataattcgcaacgaaggt
tacaccgccacttccattcatggtgataagtcccaacccgaacgcgactcagtgttgaaa
gacttccgtaatgggaaatcaaacattttaattgccactgatgtggcctctcggggtcta
gatgtggaggatttgcagtatgtaatcaactacgattacccaaactcatctgaaaactat
gtacatcgtattggacgcaccggtcgttgccaacaattaggcactgcttatacattattt
acccctgacaatggaaaacaggcacgtgatttaatttctgtgctggaggaggctggtcaa
gtaccaccaccagcattattagatttggcccgttcatcgggtggaaatggtaatggccgt
ggtaacaataatcgtcgctggcagcagcagattcctcatcagcaacgtagcaatcctttg
aactaccaggctggcaacaatcccaacggtacgtatgccccgaagcagactcaatatcag
caacagaacagcggcatttatcagcaacataacagtgttggaagtgctagtggcggtggc
agctggaacaaccgttctggtgtggttagcagcggtacgggtggtcaatacaatggccaa
gatgctaatggtggtcgcacttatcgcccacgtgcgcccttcaatgccggtggtcctcgt
ccaatgatgggctatatgccaccacatatgcaacaaaacagcgggttcatgccacaacag
caatatcgaccacgtggtcagcaattcattccacagcaaaatggcaacgtaccccgtttc
caacaatatcaaaaacgtgaatataatccacagcattatgacaaacaacagcagcaacaa
caaaatgttgttaccaatagcggtgggggtagtgttgaacatcaacagcataatggggtt
atgaatggtgctgcagttgccactattcagcaacaacaacaacagcaacaccagcaacaa
gtgaatgttgctgcaaacatagcagctgcagtcgctgccgccggtggtcaattgggtggt
gagtaccccagcaacgtttcgacaccaccggctgcggctttatacgcagcacctgctcaa
tcgccgccgaccgcagctgctaataccgctactgcttacatgtatgatgctagtggtgta
ttggcagccgcagctgcagccgctgctgctaatccatatggtggtttaccaccacacgcc
accgctgctttttatccacatccacaccagtttgccgctggcgtagctccggccacggct
gctgatgtattgcaacaacagcaacagcagcaaagagcgtaa
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