Anastrepha obliqua (West Indian fruit fly): 129239487
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Entry
129239487 CDS
T09777
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129239487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129239487
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129239487
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
C2orf69
NID
Motif
Other DBs
NCBI-GeneID:
129239487
NCBI-ProteinID:
XP_054730978
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All DBs
Position
1:57570276..57684517
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AA seq
609 aa
AA seq
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MLQHHPHTIPLGAAARIKEESTNNQPFFFAHSNPIDNAAAAAAAAAAGLIDHQHRDLHTA
LVNVAAVNGTLSNTTAAVLKSQSVQQQQQNNAAQQTAQAQAAVAAAAAAAAQAQQQQSQQ
NTVNNNASAQQQQQQQQSQQNAMVLLNGNAGTAVGGNNGTANGVVKTSSSGRSTPVNGSS
TTDPAPGKLFVGGLSWQTSSEKLKEYFNVFGTVTDVLIMKDPVTQRSRGFGFITFQEPCS
VDKVLQVPIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSADEVKAYFNQFGT
VEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVTPAA
AQLLQKRIMLSTLGVPIPTAPGQLIGTRAGVTTMSSLAMLQAPSTLQLHAASGAAAAAAA
QQAALISQSPFQVQNAAAAAAVAANPASFGKLLTTYPQALHSVRYAPYPIPTSAAAANAL
VQAQQQHVAAQQQQHANAAAAAQQQHTAHAAAAAAAQQHNAANTQNVAAAQNAHNALAVA
GPAAGASAHGAQAAHHPLAAAAAQQAALVAGNPLSAAANPYQSYTLTNVDMSSFQGVDWS
QVYGMGMYV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgttacaacaccatcctcatacaatcccccttggtgctgcggcacgcattaaggaagag
tccacaaacaatcaaccgtttttctttgctcacagcaacccaattgacaacgctgctgca
gctgcagccgcagccgctgctggactcatcgaccatcaacatcgtgacctacatactgcg
ctggtcaatgtagctgctgtaaatggtacattgtccaatacaacggccgctgttttgaaa
agccaatcggtgcaacaacagcaacaaaataacgctgctcaacagaccgctcaagcacaa
gcggcagtagcagccgccgccgcagcagcagcacaggcgcaacagcagcagtcacagcag
aatacagtaaataataacgcttccgctcagcagcagcaacaacaacagcaatcgcaacag
aatgccatggtgctgttaaatggtaatgctggaacagctgttggcgggaataatggtact
gccaatggtgttgtgaagaccagctcatcgggtcgttcgacgccagtaaatggtagctcc
actacagatccagcaccgggtaaactcttcgttggcggtcttagctggcaaacatcatcg
gaaaagctgaaggaatacttcaatgttttcggcaccgtaaccgatgtgctgatcatgaag
gatcctgtgacacagcgcagtcgcggttttggtttcatcacattccaagagccctgtagc
gtggacaaagtcctacaggtgcccatacatacactggatggcaagaaaatcgatcccaag
catgctacacccaagaatcgcccacgtcaggctaataagacaaagaagatttttgttggc
ggcgtctcgcaagatacttccgccgacgaggtgaaagcctatttcaatcagtttggcacc
gtcgaagagacagtcatgttgatggatcaacaaacgaaacgtcatcgcggtttcggtttt
gtcacattcgagaacgaggatgtcgtggatcgtgtttgtgagatacatttccataccatt
aaaaacaagaaggtcgaatgcaagaaagcccaaccaaaggaggctgtcacaccagctgcc
gcccaattgctgcagaaacgtattatgttgagcacattaggcgtgcccataccgaccgca
ccgggccagttgattggcacacgcgcaggcgtcaccaccatgagttcattagccatgttg
caagcgccgtcaacattacaattgcatgccgccagtggcgctgctgccgccgccgctgca
caacaggctgcgctcatctcgcagtcacccttccaagtacaaaatgccgccgccgctgct
gcagtagccgccaatccagctagctttggcaaattgcttaccacatatccacaggccttg
cacagcgtcagatatgcaccctatcccattcccacgagcgctgctgccgccaatgctttg
gtgcaggcgcaacagcaacatgttgcggcacaacagcaacagcatgcgaatgctgccgcc
gccgctcaacagcaacacactgcccacgctgccgccgccgctgcagcacagcagcataac
gccgccaacacacaaaacgtggccgccgcacagaatgcacataatgcgctcgccgtcgcc
ggtcccgccgccggagcgagcgcacatggcgcacaagcggcacatcatccactggcagca
gccgccgcacaacaggcagcactcgtcgctggcaatcccttgagtgcggctgccaatcca
tatcagagctatacgctaaccaatgtagacatgtccagctttcagggagtcgactggagc
caagtgtatggcatgggcatgtacgtctaa
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