Anastrepha obliqua (West Indian fruit fly): 129240234
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Entry
129240234 CDS
T09777
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129240234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoq04131
]
129240234
Membrane trafficking [BR:
aoq04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129240234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
ANAPC4_WD40
Clathrin
WD40_CDC20-Fz
zf-rbx1
zf-RING_Vps41
zf-RING_2
zf-C3HC4_2
Beta-prop_EML_2
zf-RING_11
zf-RING_5
Beta-prop_WDR3_1st
Beta-prop_WDR90_POC16_2nd
zf-RING_UBOX
Prok-RING_1
zf_RING_Vps8
DUF763
DUF3837
Zn_ribbon_DUF2089
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
129240234
NCBI-ProteinID:
XP_054731877
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All DBs
Position
3:80930469..80941036
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AA seq
1262 aa
AA seq
DB search
MNELKAPSLQSLLESDRGSSDSLLAESLLDVEDLDDVEYSIPPTGTLPTLEAVLSEFEAD
SDIGSELGVPAPTPTPTPSIAEEGGIRNGGAGGGGSIMRYAILQGVSAQTASAADRVNAG
LATACAVSSLIGIGTSHGHILNFDITQTLRWAYQDKHGQGAVSALAYNPDCTRLLAGFAR
GLVIMIDTQSGDVLRNLSDVITPNTGVLHLKWTSRPALALCSDSGGSVWSLSFTRKLGIR
GCSSRCLFSGARGEVCTMEPLLMDNSHELDQYCIIALATLSKYFIVTIRPRLKVIKYHAL
QGPANSLPLLAWQMVLIQAADTTRSVDPVIVVGRGNQLFFHQLFMANGRITLLYLRHVQI
QTNLLSVHWLGPKCVACMDVSEILHLIDVRSSKELECIDMANAGLVYGSAQFKGLATGGN
VSPALALAGTHACYNSLMSRGTQLYVLGARSLHMIAVRTWTERISYLVKNQRWQEACDLA
LDGYRATTERPKRKAQAKERIIMLFKEYLAASARAPDYCLGPIVKCLIAIGELDLLWTQL
WDRLQNKSLYLKHITEHIENDNIHRVNPTISQALVDHWLEISPSKLEEIILKLDWTCLDL
NQVLKAAKRYKLYRAQIYLNAHALNDYSSPLTELIPLVAQESSDLGNALLVYISSCLAGR
GYPSGEIPADLVQNVKHEVLRCLTSLHSNTSVPKELPYPYLRALLKFDTRETLNVISLAF
QEKEFSGELGFSHRKRIINILLEIMTPENTTWAEIGCLLNFIAQQISQQCLTPDTQLLEK
VLNHLSKEEIANETARQHSERESAWHELLVNNCLKEVSNDEEQLHLAKRAHCYYVEEYLL
EKLQRYDGIVECYLNNSLRHDIMFSYMERHVRDPQRKIYEQIENNLLRMLEINAKETTRI
VDFYYSGQIQKLVEVAENDAHSLLTFLEHLHRRRVDLTAEQSEQLLALLCKHKPKEVEDF
VRNTDEYRVEEALKLVLDCKLSRAAIYLHEKQGNYKAAFMLSMEVLATMHGEEAAVLAQE
ISNLCVRATDVLTNMECEKFWFMLLQQILPRDDLKSSTKYMLHVASQHVDLPKLVQLVMN
THNVSGNFGDIKDLLMSMLSQSRLETDAMEKTLKIKGQDLASTFAHKRREVTRGLLVSVM
RCVMCQQRLYNQSDILVLGGCGHAFHDKCAATYNETLQVHHNDKILQSTHAENDGCVINY
SCPNCLSAIENNFYSNAIKLSEPSHKVYELSKGAHNLHQQQEQILQMGILRLKAPPRKFT
SN
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactgaaagcgccgtcgttacagtcgctcttggagtcagatcgcggatctagt
gatagtctacttgcagaatcgttgcttgatgtagaagatttagatgatgtggaatattca
ataccgccaacaggtacattgccgacgttagaggcagtattaagcgaatttgaagctgat
tctgacatcggttcggaattgggggtaccagcaccgactccaacaccaacgccctccatt
gccgaagaaggtggaattcgcaatggtggcgcgggcggtggaggttcgataatgcgatat
gccatattacagggcgtctcggcgcaaacagcatctgcagcggatcgagtgaatgctgga
cttgcaacagcatgtgctgtgtcgtcgttgattggcattggcacttcacatggccacatt
cttaattttgatattacacaaacgttacgatgggcttatcaagacaaacatggacaagga
gcggtgtctgcgctggcatacaatccggattgcacacgtcttctagctggctttgctcgt
ggactagtcattatgattgatacacaatccggggatgtgttacgcaatctttctgatgta
atcactccaaacacgggagttctacatttaaaatggacttcaaggccagccttagctctc
tgctctgactctgggggctcagtgtggtctttaagcttcacccgtaagttgggcattcgc
ggttgttcatcacgttgtctcttcagtggcgctcgtggtgaggtatgcactatggagcca
ttactgatggacaactctcacgaactagaccaatattgcattattgccctagctacatta
tcaaaatatttcattgttactatacgtccgcgactgaaggttatcaagtatcatgcgctg
caaggaccagcaaattccttaccactactcgcttggcaaatggttttgattcaagcagca
gataccacacgttctgttgacccagttatagtggtaggccggggcaatcaactatttttt
catcaactctttatggcaaatggacgtataacgttgctgtacctgcgccatgtgcaaatt
cagacaaatttattatctgtacattggctagggccgaaatgcgtcgcctgcatggatgtc
tcagaaatactgcatctaatagatgtacgttccagcaaagagcttgaatgtatcgatatg
gccaatgccggactagtatatgggtcagctcagttcaaaggacttgccactggcggaaat
gtctcgcctgctttggctttggccggaacgcatgcgtgttacaattctttaatgtcgcga
ggcacgcagttatatgttttaggcgcacgatctttgcatatgattgctgtgcgtacatgg
actgagcgtatcagctacttggtaaaaaatcaaagatggcaagaagcgtgtgatcttgct
ttagacggttatcgtgctactactgagcggccaaaacgtaaggcgcaagctaaagaacga
attataatgctatttaaagaatatttagctgcttctgctcgtgcacctgattattgtctg
ggacccatagtaaagtgtctcatcgcaattggagagctagatctgttatggacacagctg
tgggaccggctacaaaataaaagcctatacctaaagcatatcacagagcacatagaaaat
gataatattcaccgtgtaaacccaacgatatctcaggcactggttgatcattggctggaa
atatcaccatcaaaattagaggaaataatacttaaactagactggacctgtcttgaccta
aatcaggtgctaaaagcagcaaaacgatacaagctttatcgcgcacaaatctacctcaat
gcacatgcgcttaatgattactcaagtccactcactgagctaatacccttagtagctcag
gaatcctcggatcttggcaacgcactacttgtgtacatatctagttgcttggcgggacgt
ggttacccaagcggcgaaattccggccgatctagttcaaaatgtgaaacacgaagttctt
cgctgcctaacttcactacattcgaatactagcgtgccgaaagaattgccttatccatat
ttgcgtgctctactcaaattcgatactcgagaaacattaaatgtaatttccttagctttt
caagagaaagaatttagtggagaacttggattttctcaccgcaaacgcatcattaacata
ctactggaaataatgacaccagaaaacacaacttgggctgaaataggctgccttttgaat
tttattgcccaacaaatatcgcaacaatgtctaacacccgatacccagctattggagaaa
gtactcaaccatttatcgaaagaagaaatagcgaatgaaactgctcgtcaacattcggag
cgtgagagtgcatggcatgaattgcttgttaacaattgtctgaaagaagtgagcaacgat
gaggagcagctgcacctagccaaacgcgcgcattgttactacgtagaagaatacttgctg
gagaagttgcagcgctatgatggtattgtcgagtgttatcttaacaacagcctgcgtcac
gatatcatgtttagctacatggaacgccatgttcgcgatcctcagcgtaaaatttacgaa
caaattgaaaacaacttactgcgaatgctggaaataaacgccaaggaaacaacgcgcatc
gtagacttctattatagtggacaaatacagaaattggtggaagttgctgagaatgatgca
cactcattattgacttttcttgagcatttacatcggagacgagtcgatttaacggcagag
cagagtgaacaattattggcacttttatgtaagcataaaccaaaagaggttgaagatttt
gtacggaacactgatgaataccgcgtggaagaggctctaaaactggtgctagattgtaaa
ctcagcagagcagctatttacctgcatgaaaagcaaggcaattacaaggctgcattcatg
ttatccatggaagtactagctacgatgcacggtgaagaggcagctgttttagcacaagaa
attagcaacttgtgtgtgcgagccactgatgttctaacaaacatggaatgtgaaaaattt
tggtttatgctgttgcagcaaatactgccgcgtgacgatctcaaatctagtacgaagtat
atgttgcatgtagcatcacaacatgttgatttaccaaaacttgtgcaactggtaatgaac
acccataatgtttcgggaaatttcggtgatattaaagatttactaatgagtatgctatcg
cagtctcgtttagagacggatgccatggagaaaactcttaaaatcaagggccaagatcta
gctagtacatttgcccataaacggcgtgaagttactcgtggtcttttggtatcagtaatg
cgttgtgtaatgtgccaacagcgtttgtacaaccagagtgatatacttgtcctaggtggt
tgcggtcatgcttttcatgataaatgtgcagcgacgtataatgagacattgcaagtgcat
cacaatgacaagattttacaatcaacacacgctgaaaacgatggatgcgtgatcaattat
tcatgcccgaattgtctctcggcgatagaaaacaacttctacagcaatgcaattaagcta
tcagaacctagccataaagtatatgaactcagtaaaggagctcataatttacatcagcaa
caagaacaaatacttcaaatgggcattttaagattgaaagcaccaccgcgaaagtttaca
agcaactaa
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integrated database retrieval system
