Anastrepha obliqua (West Indian fruit fly): 129240237
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Entry
129240237 CDS
T09777
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129240237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129240237
03041 Spliceosome [BR:
aoq03041
]
129240237
03036 Chromosome and associated proteins [BR:
aoq03036
]
129240237
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
129240237
Spliceosome [BR:
aoq03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
129240237
Complex B
129240237
Complex C
U2 SnRNP specific factors
129240237
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
129240237
TFTC complex
129240237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
129240237
NCBI-ProteinID:
XP_054731884
LinkDB
All DBs
Position
3:15497967..15505961
Genome browser
AA seq
1227 aa
AA seq
DB search
MYLYNLTLQKGTGITHAVHGNFSGGKQQEVILSRGKSLELVRPDSNTGKVHTVLSVEVFG
CIRALMSFRLTGGTKDYIVVGSDSGRIVILEYNPTKNSLDKVHQETFGKSGCRRIVPGQY
FAIDPKGRAVMIGAVEKQKLAYILNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP
LFACLEIDYEEADNDPTGEAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPDRGMIFICSATHRTKSMYF
FLVQTEQGDIFKVTLETDDDVVSEIKLKYFDTVPPAIAMCVLKTGFLFVACEFCNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGETFFFAPRPLKNLVMVDEMPSFAPIVSSQVADLANEDT
PQLYVLCGRGPRSSMRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSSLGDDALVQVYPDGIRHIRSDKRVNEWKAPG
KKSITKCAVNQRQVVITLSGRELVYFEMDATGELNEYTERSEMPNEIMCMALGQVPEGEQ
RSWFLAVGLADNTVRIISLDPNDCLSPCSMQALPSPAESLCIVEMGHTESTTSGANDEPG
ERTTNTSTKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIRMQGSEA
VLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGVVAISTNTLRILALEKLG
AVFNQVSFPLEYTPRAFAIHPDTGRMIIAETDHNAYTDETKNARKQQMAEEMRMAAGDEE
RELANEMANAFISEVLPEETFSSPKAGLGLWASQIRGLDPIHGHTFFKIPLVQNEAIMSM
CILKFNIAADGRYYLALGVAKELQLNPRITNGGCIDIYKIDPTCSNVEFMHRTEIDEVPG
ALASFQGRLLAGCGRILRIYDLGKKKLLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVF
FVRYKRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNMSVQRLPHSVTDDVDEDP
TGTKSLWDRGLLSGASQKSENISSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFV
PFTSREDFDFFQHLEMHMRNENPPLCGRDHLSYRSSYYTVKNVLDGDLCEQYLSIDPAKQ
KSIASDMFRTPNQICKKLEDIRTRYAF
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtatctatacaatctaaccttacaaaaaggcactggcattacacatgccgtgcatggg
aacttctctggtggaaaacagcaggaggtgattctctctcgtgggaaatccttggagttg
gtacgcccagattcgaatacgggaaaagtacacacggtcttgtctgtagaagtttttggg
tgtatacgtgccttgatgtctttcagactgacaggaggaactaaagattacattgtcgtt
ggctccgattctggacgaattgttattcttgagtataatcctaccaagaattctctagac
aaagtgcatcaagaaactttcggcaaatctggttgtcggcgtatcgtgccaggacaatat
tttgctatagatcctaaaggacgtgctgttatgataggtgcagtggagaaacagaaattg
gcttacattctcaatcgtgatacgcaagctcgtcttacaatatcctcgcctttggaagca
cataaatcgaatacgctcacctatcatatggtaggagtggatgtcggttttgataatcca
ttatttgcatgcttagaaatcgactacgaagaagcagataatgatcctacaggcgaagct
gcacagcgcacgcagcagactttgacgttctatgaattggatctgggtcttaatcatgtt
gtacgcaagtactctgaaccacttgaggaacacgcaaacttcttaatatctgtaccgggt
ggcaatgatggcccatccggagtactgatttgttcagaaaattatcttacatataaaaat
ttgggggatcagcatgatattcgctgtcctataccacgtcggcgaaatgatttggatgat
cccgatcgtgggatgatattcatttgttcggctacgcatcgtacaaagagcatgtacttc
tttttggtgcagaccgaacagggtgatatattcaaagtaactcttgaaacagatgatgat
gttgtatctgagatcaaactcaaatatttcgatactgtaccgccagctattgccatgtgt
gtattgaagactggtttcctgtttgtagcttgtgaattttgcaaccattatctctatcaa
attgctcatcttggagacgacgacgatgaacctgaattcagctcagctatgccactcgaa
gaaggcgagacgttcttttttgcgccgcgaccattaaaaaatctcgttatggttgacgaa
atgccttcttttgcacctatagtctcgtcacaagttgctgatttggccaacgaagacacc
cctcaactttatgtgttgtgcggcagaggacctcgttcttcaatgcgtgtcctgcgacat
ggcttagaagttagtgaaatggctgtatcagaactacccggaaatccaaacgctgtatgg
acggttaagaagcgaattgatgacgagttcgacgcttatataatagtgtcatttgtgaat
gctacgctggttttaagcattggtgagaccgttgaagaagtaacagacagtggtttccta
ggaaccactcccactttgagttgttcttctttgggtgatgatgctctggttcaagtgtat
cccgatggtatacgtcatatacgttctgataagcgcgtgaatgaatggaaagctcctgga
aagaaatcaattacaaaatgtgccgtaaatcagcgtcaagtggttatcacgctgtcagga
agagagctagtttacttcgaaatggatgccactggcgaactgaacgaatatactgagcgt
tcggaaatgcctaatgaaatcatgtgtatggctctcggtcaagtaccggagggcgaacaa
cgctcgtggtttttagctgttggtttggccgacaacactgtacgcatcatctctttagat
ccaaatgattgtctttcaccctgctctatgcaagctttgccatcacctgccgagtcgctt
tgcatagtcgaaatggggcatacagaaagtactacaagtggtgcaaatgatgaacccggt
gaacgtactaccaacacttctacaaagggcacaatttatctcaatattggtctgagtaat
ggtgtgctattgcgtactgtattagacccggtatctggcgacttggctgacacgcgtact
cgttatcttggctctcgaccagtaaagctctttcgaatacggatgcaaggctcggaagct
gtacttgctatgtctagtcgcacttggctctcatactatcatcaaaatcgattccaccta
acaccattatcttatgaaacccttgaatatgcttcgggattctctagtgaacagtgtagc
gaaggtgtagttgccatctcgaccaatacgctgcgcattttggctttggaaaaattgggc
gcagtgtttaaccaggtttcttttcctcttgaatacacaccacgcgcctttgctattcat
ccagatacgggtcgtatgattattgcggaaactgatcacaatgcatacacagatgagaca
aaaaacgcacgtaaacagcaaatggcagaagaaatgcgaatggctgcaggcgatgaggaa
cgcgagttggccaatgaaatggcgaatgcatttattagcgaagttttacctgaggaaact
ttctcgtcacctaaagctggtttgggtttgtgggcttcgcaaatacgtggactggaccct
atacatgggcatacattttttaaaataccattggtgcaaaatgaagcaatcatgtccatg
tgcattctcaagttcaacattgctgccgatggtcgatattacttggcacttggtgtggct
aaagaattgcagctaaacccgcgcataacgaatggtggttgtattgacatttacaaaatt
gatcccacctgctcgaatgtagaatttatgcatcgcaccgaaatcgatgaagtaccgggt
gcattggccagtttccagggacgattattggcaggttgtggtcggatattacgaatttat
gacttgggaaaaaagaagttgcttcgcaagtgtgaaaataaacacattccatatcaaatt
gtcaatatacaggcaatgggacaccgcgtctatgtgtcggatgtacaagaatcagttttc
tttgtacgatataagagagcagaaaatcaactcattattttcgcagatgacacacatcca
cgttgggtaactgctaccaccttattggactacgatacaattgccatcgctgataaattc
ggcaatatgagtgtgcagcgattgccacactctgtaacggatgatgttgatgaggatcca
acaggcactaaatcgctgtgggaccgcggattgctatctggagcgtcacaaaaatcggag
aatatttcctcttttcatgtgggtgaaatcataatgtccttgcagaaagctactttaata
cctggtggctccgaagcattaatatatgcgacacttagcggtaccgtcggtgcttttgta
ccatttaccagtcgcgaggacttcgacttcttccaacatttggagatgcatatgcgcaat
gaaaatccgccactatgtggtcgcgatcatttgagttacagaagttcatactataccgtg
aaaaatgtgctagatggcgatttatgcgaacagtatttgtctattgacccggccaaacag
aagagcattgccagcgatatgttccgaactccgaatcagatatgcaaaaaactggaggat
atacgcacgcgctacgctttttaa
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