Anastrepha obliqua (West Indian fruit fly): 129240389
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Entry
129240389 CDS
T09777
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03030
DNA replication
aoq03410
Base excision repair
aoq03420
Nucleotide excision repair
aoq03430
Mismatch repair
aoq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129240389
03410 Base excision repair
129240389
03420 Nucleotide excision repair
129240389
03430 Mismatch repair
129240389
03440 Homologous recombination
129240389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoq03032
]
129240389
03400 DNA repair and recombination proteins [BR:
aoq03400
]
129240389
Enzymes [BR:
aoq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129240389
DNA replication proteins [BR:
aoq03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
129240389
DNA repair and recombination proteins [BR:
aoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
129240389
MMR (mismatch excision repair)
DNA polymerase delta complex
129240389
BRITE hierarchy
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
DUF6356
Motif
Other DBs
NCBI-GeneID:
129240389
NCBI-ProteinID:
XP_054732132
LinkDB
All DBs
Position
3:104461812..104465745
Genome browser
AA seq
1101 aa
AA seq
DB search
MSGFSGKRKFTENGKAGNNGQSAGGKQSKPRNDEEDFDFDEMEDDMAADGFREDIDPNAL
LGEGPENQQTSVKWSRADPPKLDPSSDELVFQQIDIENYLGEPLPGMPGSQIGPVPIIRM
FGITMKGNSVCCHVHGFCPYFYIAAPRSFEQNHCNALREALDKKVLADMRSNKNNVQEAV
LEVQLVERLNIYGYQGDTKQRYIKITMSMPKLVAAAVRLLTHQVVMSDFDFQDCRAFESN
IDFDIRFMVDTHVVGCNWIELPAGTWRMRDKRTKPLPESRCQIEVDVAYDKFISHEPEGE
WAKVAPFRILSFDIECAGRRGIFPEPKMDAVIQIANMVIRQGEPEPFIRNVFTLNTCAPI
VGSEVRCFPKETDLLDAWSSFVREVDPDILTGYNINNFDIPYLLNRAAHLKVKNFEYLGR
IRNIRSVIKEQILQSKQMGRRENKYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQ
EQKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLDKLMPVVNYMEMARVTGVPL
ESLLTRGQQIKVLSQLLRTARTKNFIMPAHQSKASEEQYEGATVIEPKRGYYADPIATLD
FASLYPSIMIAHNLCYTTLLQPGMKERLGLSDEQVQRTPANNTFVRADVRRGLLPEILES
LLAARKRAKNDLKVEKDPFRRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA
FGRTMIELTKNEVEQHYKIANGYENDAVVIYGDTDSVMVNFGVKTLERAMELGREAAEIV
SAKFVRPIKLEFEKVYYPYLLINKKRYAGLYFTRPETYDKMDCKGIETVRRDNSPLVANL
MNTCLQKLLIERNPEGAVDYAKRIIADLLCNRVDISQLVITKELSKTDYAAKQAHVELAN
KMKKRDPGTAPKLGDRVPYVICAAAKNTPAYMKAEDPLYVLENCVPIDANYYLEQQLSKP
LLRIFEPLLGDRAESILLKGEHTRTRSVVTSKVGGLAGFMTKKSSCLGCRALMPNGYEKA
ALCPHCEPRMAELYQREVIAKRSLEETFNRLWTECQRCQGSLHEEVLCSNRDCPIFYMRQ
KIRMDLDTQEKRVQRFGAADW
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcttttctggcaaaagaaaatttacagaaaacggcaaagcaggcaataatggt
caatccgcgggaggcaaacagtcaaaaccacggaacgatgaggaggattttgattttgat
gaaatggaagatgatatggctgcggacggttttagagaggatatagatccgaatgcttta
cttggcgaaggtccagaaaatcagcaaacttctgtgaaatggtctcgcgctgatccacct
aaattagatccttcgtctgatgaattggtatttcaacaaattgacattgaaaattacttg
ggtgagccattgccaggtatgccaggatcacagattggtcctgtaccaataatacgcatg
tttggcattaccatgaagggcaactcggtgtgttgtcatgtgcatggcttctgtccctat
ttttacatagcggctcctcgcagtttcgagcaaaatcattgtaatgccctacgcgaagct
ttagataaaaaagtattggccgatatgcgcagcaacaaaaataacgtacaagaagctgtg
ctagaggtgcaactcgtagagcgtctcaatatttacggttatcaaggtgatactaagcag
cgctatataaaaataactatgtcaatgcccaaactagtggcagcagctgtgcgtctactt
actcatcaggtagttatgtcggattttgattttcaagattgtcgtgcattcgaaagcaac
attgacttcgatatacgtttcatggtggatacacatgtggtgggctgcaactggattgag
ctgcctgcgggtacatggaggatgcgagacaaaagaacaaaacctttgccggagtcacgt
tgccaaatcgaagttgacgtggcatacgataaattcatatcgcatgagccggagggagag
tgggcaaaggttgcgccttttcgtatactctcatttgatattgagtgtgctggacgcaga
ggcattttccccgagcctaaaatggatgctgtcatacagattgccaacatggtaatacga
cagggtgaacccgaaccgttcataagaaatgtatttaccttaaacacatgtgcgcctatc
gttggttccgaggtacgttgttttcctaaagaaactgacctcctagatgcttggtccagt
tttgtgcgcgaagttgatccggatatattaactggctacaatataaataactttgatata
ccctatctactgaatcgtgctgctcatttaaaagtgaagaattttgaatatcttggacgg
ataaggaatatacgttcggttatcaaggaacaaattctgcaatcgaaacaaatgggccga
cgtgagaataagtatgtcaattttgagggtcgcgttccttttgatttgctttttgtgttg
ttgcgagattacaagttgcgttcgtatacgcttaatgctgtgagctatcattttttgcaa
gagcagaaagaggatgtgcatcatagcataattacagacctgcaaaatggggacgagcaa
acgcgtcgacgtttggctatgtattgcttgaaagatgcctacttgcctttacgactgctc
gataagctaatgcctgtcgtgaattatatggaaatggctagggttacaggcgtgcctttg
gaatcattgctcacacgtggccagcaaattaaagtgctgagtcaactgctgcgcactgcg
cgtactaaaaacttcataatgcctgcccatcaatcgaaggcgtccgaggagcagtatgag
ggcgcaacagttatagagccgaagcgtggctactatgctgatccaatagcaacgctcgat
ttcgcttcactatatccgagtataatgattgcacacaatctctgctatacgacgctgttg
cagccaggcatgaaagaacgcttgggactttcagatgaacaggttcaacgaacaccagct
aataatacattcgtgcgcgcagatgtgcggcgtggcctgttgccagagatcttggaatca
ttactagcggcgcgtaagcgtgccaaaaatgatttaaaggtagaaaaagatccttttcga
cgcaaagtgctcgatggtcgtcaattggcattgaaaatatccgccaattctgtttatggt
ttcacgggcgcacaagttggcaaactgccatgtctagaaatatcaggcagcgttaccgcc
tttggacgtacgatgattgaattgacaaaaaatgaggtagaacaacattataaaatcgcc
aacggttatgaaaatgacgccgtagtcatctacggtgacactgattcggtgatggtaaat
tttggtgttaaaactttagagcgcgccatggagcttgggcgtgaagcggcagaaatagtg
agcgcgaagtttgtgagacccatcaaattggaattcgaaaaggtctactatccgtatttg
ttgatcaataaaaaacgttatgcaggattgtatttcacacgtcccgagacgtatgacaaa
atggattgcaaaggcattgaaaccgttcgtcgtgataattcaccgctcgttgcgaatctc
atgaacacttgcttgcaaaagctactcatcgaacgcaatcccgaaggtgccgttgactat
gcgaaacgtattatagccgatttactatgtaatcgcgtcgacatctcacagctagttatc
accaaagagctgtccaaaacagattatgctgctaagcaagcgcatgtagaattggcgaac
aaaatgaagaaacgtgaccctggcacagcaccgaaattgggtgaccgtgtgccgtatgtc
atttgtgcggcagcaaagaacacacccgcctacatgaaggcagaagatccattgtatgtg
ttggagaattgtgtgcctatcgacgcgaactactatctggagcaacaactttcgaaacct
ttgttacgcatattcgaaccgctgcttggcgatcgtgccgaatcaattttgctgaagggc
gagcacacacgcacacgttctgtggttacttcaaaagttggtggtcttgccggctttatg
acgaagaaatcatcctgtcttggctgtcgtgcgctcatgcctaacggctacgagaaggcg
gcactctgtccgcattgtgagccacgcatggccgaactgtatcagcgcgaagtcatagca
aagcgctcgctggaggaaacctttaacaggctatggaccgagtgtcaacgttgtcagggc
tcactgcacgaagaggtattgtgctcgaatcgtgattgcccgattttttacatgcgtcaa
aaaatacgcatggacttggatacgcaggaaaaacgtgtgcagcgtttcggcgcggcggat
tggtga
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integrated database retrieval system
