Anastrepha obliqua (West Indian fruit fly): 129240404
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Entry
129240404 CDS
T09777
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03018
RNA degradation
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129240404
09123 Folding, sorting and degradation
03018 RNA degradation
129240404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129240404
03041 Spliceosome [BR:
aoq03041
]
129240404
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129240404
mRNA degradation factors
5'-3' decay
Lsm complex
129240404
Spliceosome [BR:
aoq03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129240404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
LSM14
Motif
Other DBs
NCBI-GeneID:
129240404
NCBI-ProteinID:
XP_054732147
LinkDB
All DBs
Position
3:65310378..65310970
Genome browser
AA seq
91 aa
AA seq
DB search
MTAVPPPSNVSTLLPLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLNDVTEYEN
TPEGRRITKLDQILLNGNNITMLVPGGDIPE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagtgcctccgccttcgaatgtatccacattgttaccactcgaattggtggac
aaatgcataggctctcgcatacacattatcatgaagaatgataaagagatggttggtacc
ttgttggggtttgacgacttcgtgaatatgttattaaatgatgtaacggaatatgaaaat
acgccggaaggtcgtcgtataaccaaactcgatcaaatacttctcaatggcaataatata
acaatgttagtccctggcggcgatataccggagtga
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