Anastrepha obliqua (West Indian fruit fly): 129240422
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Entry
129240422 CDS
T09777
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129240422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129240422
03012 Translation factors [BR:
aoq03012
]
129240422
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129240422
Translation factors [BR:
aoq03012
]
Eukaryotic type
Release factors
129240422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
129240422
NCBI-ProteinID:
XP_054732178
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Position
3:111990336..112007794
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AA seq
438 aa
AA seq
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MSGEETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTAS
NIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSD
MFDPRLQSKVIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHANSTSNTVLHLTPEQEKDKSHFTD
KESGVEMELIESQPLLEWLANNYKMFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDF
QSLQLDEIDNDYYEIDEY
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagaggaaacgtccgctgatcgcaatgtcgaaatttggaaaatcaagaaactc
attaagagtttggagatggcgcgaggcaatggaactagcatgatttcattgatcataccg
ccaaaggatcaaatctcacgtgtcagcaaaatgttggccgatgaattcggcacagcgtcc
aatatcaagtcacgtgtcaatcggctgtccgtgttaggcgccattacatcggtacagcat
aggcttaaattatacaccaaagtgcctccaaatggtctggtcatctactgtggcaccatt
gtcacagaagaaggtaaagagaagaaggttaatattgattttgaacccttcaagccgatt
aatacgtcgctgtatttatgcgataataagttccacactgaagcgttgaccgctttactg
gccgatgataataaattcggtttcatagtgatggatggtaatggcgctctcttcggtaca
ctacaaggtaatacacgcgaagtgctgcacaaattcactgtcgatctgccgaagaagcac
gggcgtggtggtcagtcagctttgcgttttgcacgtctgcgcatggagaagcgtcataat
tatgtgcgcaaagtggctgaagttgctacgcaattgttcattacgaatgataaacctaat
attgcgggcttgattttggctggtagtgcggacttcaagaccgagttgagtcaatctgat
atgttcgatcctaggctgcaatccaaggttattaagctggtggatgtctcgtatggtggt
gaaaatggttttaatcaagcgatagaattggcggccgagtcattgcagaatgtaaaattc
atacaagagaaaaaactcattggacgttacttcgatgaaatttctcaggacactggcaaa
tattgttttggtgtggaggatacattgcgcgccttggaattgggttctgtagagactttg
atctgttgggaaaatttagatatccaacgttatgtgttgaagaatcatgcgaactccacg
tcgaacacagtactgcacttgacgcccgaacaagagaaggacaagtcacatttcaccgac
aaggaaagtggcgttgaaatggagttgattgagtctcagccgctgctcgaatggctggcg
aacaactacaaaatgttcggtgctacacttgagattattacggacaaatctcaagaaggt
agccagtttgtgcgaggtttcggtggcattggtggtattttgcgctacaaagtggacttc
cagagtttgcaactcgacgaaatcgacaatgattattacgaaatagatgaatattag
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