Anastrepha obliqua (West Indian fruit fly): 129240467
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Entry
129240467 CDS
T09777
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03022
Basal transcription factors
aoq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129240467
09124 Replication and repair
03420 Nucleotide excision repair
129240467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129240467
03400 DNA repair and recombination proteins [BR:
aoq03400
]
129240467
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129240467
DNA repair and recombination proteins [BR:
aoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129240467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
129240467
NCBI-ProteinID:
XP_054732259
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All DBs
Position
3:complement(141291727..141293685)
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AA seq
396 aa
AA seq
DB search
MADIDGEDPKEYRWETGYEKTWEAIKEDDDGLLDGAIADIIQKAKRKRQAQKTQQNRLGM
MRHLYIVLDCSESMTVPDLKPTRMLCTIKLLEIFVQEFFDQNPISQLGMIALKGKRAEKL
TELTGTSKLHLKALESISKIPLTCEPSLQNGLDLAMKALKVVPSHASREILIIMGSLTTC
DPVDINSTIDGLKADNIRCSVISLSAEIHVCRHLTQQTQGTYGAVLDDAHYRDQLLAHVD
PPPAAQTQENSLIKMGFPHAKTDGGKDPPLSMCMCHIENTEEPSKLTSGGYHCPQCFSKY
CELPVECQTCGLTLVSAPHLARSYHHLFPVQHFTELEFNGQAANCYACQKPLTEATDKNV
YRCEKCLQVYCIDCDIFIHDTLHTCVGCNTAKPHRK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcagatattgatggagaagacccaaaagagtatcgctgggaaaccggctacgaaaaa
acatgggaagccatcaaggaggatgatgatggactgctggacggcgctatagccgatatt
atacaaaaagccaagcggaagcggcaggcgcaaaagacgcagcagaaccgtctgggaatg
atgagacatctatacattgtactggattgctccgagtcaatgacggtgcctgatttgaaa
cccacacgaatgttgtgcacgattaagcttttggaaatctttgttcaagaattctttgac
cagaatcctatcagccagttgggtatgattgcactgaaaggaaaacgagccgaaaagttg
actgagctaactggcacatcgaagttacatttaaaagctctggaaagcattagtaaaatt
cccctcacatgtgagccttcattgcagaatggtctcgatctggccatgaaagcattaaag
gttgtgcccagtcacgcttcgcgcgaaatactcataattatgggttcactgacaacatgc
gatccggtcgacataaatagtacaatcgatggccttaaagccgacaacatacgctgctcc
gtaatctcgctttctgctgagatacacgtttgtcgtcatctcacgcaacaaactcaaggc
acttatggcgctgttctcgatgatgcacattaccgtgaccaattgctggcacatgtagat
ccaccgccagcggcgcaaacgcaggagaactctttaataaaaatgggctttccacatgcg
aagacggacggtggcaaggaccctccactttcgatgtgtatgtgtcacattgaaaataca
gaagaaccaagtaagctcacctccggtggttaccattgtccgcagtgttttagtaaatat
tgtgagttaccagttgaatgtcagacctgtggtttgacattggtatcagcgccacatttg
gctcgctcctatcaccatctttttcctgtgcaacactttacagaactggaattcaatgga
caggctgcgaattgctatgcttgtcaaaagccgttaacagaagcaacggacaaaaatgtg
tatcgctgtgagaaatgcttgcaagtttactgcattgattgtgacatttttattcatgat
actctgcacacatgcgtcggctgtaatacagctaaaccacatagaaaatag
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