Anastrepha obliqua (West Indian fruit fly): 129240496
Help
Entry
129240496 CDS
T09777
Name
(RefSeq) GATA zinc finger domain-containing protein 14
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129240496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoq03000
]
129240496
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129240496
04121 Ubiquitin system [BR:
aoq04121
]
129240496
Enzymes [BR:
aoq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129240496
Transcription factors [BR:
aoq03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
129240496
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129240496
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129240496
Ubiquitin system [BR:
aoq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129240496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
zf-C3HC4_3
RRM_1
zf-UDP
zf-C3HC4_2
Nup35_RRM_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
129240496
NCBI-ProteinID:
XP_054732306
LinkDB
All DBs
Position
3:complement(127223990..127260465)
Genome browser
AA seq
1002 aa
AA seq
DB search
MDNNEDVLECPLCMEPLEVDDLNFFPCTCGYQICRFCWHRIRTDENKLCPACRKEYTENP
ADFTPLTQQQILAFKMMKKQRDQKRKQKVRVTENRKHLSNVRVVQKNLVFVVGLPPRLAD
AEVLKKHEYFGKYGKIHKVVINPSTAYAGVQGPSASAYVTYVHNNDALRAIQSVNTRNII
IDSRLIKTSLGTTKYCSHFMKNQVCPKGDCMYLHELGDPEASFTKEEMHQGKHQEYEKRL
HDALVVGSNSPGTSGTSETNQTNAGVPVWGSNGGENNHGTANKNSNISKTNSSSQYQVMP
SSAIPSPSLASASNGPTVETVTDHSPTLSASPVIKDVAASPGEVKHKKERGRQDKVKNDK
NAKSKNKNIVNDASKNYTGNTHRDNTSNHNDVKDGAETPADGTASQFSSPVQERDITPSN
SSSGITKGKINKPKASKKSVDESDIKNIEDSEENNHVNESDKAISSNNNENALSELFESP
EVSVNELTDSKKNESSEVDEVVLDNSFEEPNLKNEESDLPADIKPEIAQLTLFDNKLTPI
FSPVLPLQNPMCPEDKVEDLPNQMNNIKISPLPDLLKGIEEQQFQQVHPHQQKELARLLE
LHKQNSLFGNMNHSQPNVPQGGLQNHFGGLTEMVQSPLTTLEHASELLLSQNLYGINMSK
FFDFHKNQQLQLQQHCVSNEQPIGNGSNTLLENNLNPYQFMQHPALSTLQQQQQHQQQQQ
QKHRTLGQLDSVMALQQHHPTIQNQQHTILQNQQSRMQNEFSANTFVDDDLGFDPFTETQ
KGLAELMENEIVKPQHSKTNCNTMRVPTEPNMIHQHQHNMDNLQRARMPPPGFNHMNTFG
LNAPREHNTSKMMPFLNMTGNRAHTNDIQHLSAFNTWDSHLQSPRHQLPSFGELQAHQMN
QNNRNAGNLGNDWTAMDPAILSFRQFPSCPQPPQMLHPHQQKDLFPQHLTQQQQQNNFGN
PAHGGGNMHLPNNQIGSQSAAQAQVNANVQGMLEYLKNRQFF
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggataacaacgaagatgtacttgaatgtccgctttgcatggaacctctcgaggttgat
gatctgaacttctttccatgtacttgtggctaccaaatttgccgattttgctggcacaga
atacgcaccgacgaaaataagctgtgcccagcatgtcgaaaggaatatactgaaaatccg
gcggatttcacgccactgactcagcagcagattttagcgttcaagatgatgaaaaagcaa
cgcgaccaaaagcgtaagcaaaaggtgcgcgttactgagaatcgcaaacatctgtcgaat
gtgagagtggttcaaaagaatttagtatttgtggtcggcctaccgccgcgattggccgat
gcagaggtactcaagaagcatgagtactttgggaaatacggtaagatacataaagttgtg
ataaatcccagcaccgcctatgccggagtacaggggccatccgcatcggcctatgtcact
tatgtacataataatgacgctttaagagctatacaaagtgtcaatactcggaatataata
atagatagcagactcataaaaaccagtttgggaacaacaaaatattgcagccattttatg
aaaaatcaagtatgtcctaagggtgattgtatgtatcttcatgagttaggcgatccagag
gctagttttacgaaggaggaaatgcatcaagggaaacaccaagaatatgagaaacgctta
catgacgcattggtagtgggttcaaatagtcctggcacgagcggcacaagtgaaacaaat
caaacgaatgctggtgttcccgtgtggggaagcaacggcggagagaataatcatggaact
gctaataaaaatagtaatataagtaaaacaaattccagttcgcagtatcaagtcatgcct
tcgtcagcgataccttcgccttcattagcatctgcatctaatgggcctactgttgaaaca
gtaacagatcacagccccactttatcggcttcaccagtgattaaagatgtcgcagcaagt
cctggtgaagtgaagcacaaaaaagagcggggtaggcaggataaggttaaaaatgacaaa
aacgcaaaatcaaaaaataaaaatattgtaaatgatgcaagtaaaaattatactggcaat
acacacagagataatactagcaatcacaatgacgtaaaggatggcgcagaaactcctgca
gatggaacggcttcccaattttccagcccagtccaagaacgcgatattaccccgagcaat
agtagttccggtataacaaagggcaaaataaacaagccgaaagcttcgaaaaaaagtgtc
gacgagagtgacattaaaaacatagaggactcggaagagaataatcatgtaaatgaaagc
gataaagctattagcagtaacaataatgaaaatgctttatcggagttattcgaaagtcct
gaagtatcagtaaacgaattaactgatagtaaaaagaacgaaagtagtgaggtggatgaa
gtggttctggacaactcttttgaagaaccaaatttgaaaaatgaagagagcgacctccct
gctgacatcaaaccggagattgcacaacttactctgttcgacaacaaattaactccaata
ttctccccagtacttccactccagaatccaatgtgtccagaagataaggtagaagatctg
ccaaaccaaatgaataatatcaaaatatcacctctgcccgatttattgaaaggcattgaa
gagcaacaatttcaacaagtacatcctcaccaacaaaaagaattggcacgtttacttgaa
ttacacaaacaaaatagtttatttggaaatatgaatcattcgcagcccaatgttccacaa
ggcggtttacaaaatcattttggcggcttaaccgagatggtgcaatctccgctgactaca
ttggaacatgcatctgaacttctattgagccaaaatttgtatggcataaatatgtcgaaa
ttttttgattttcacaagaatcagcaattacagttgcaacaacattgcgttagtaatgag
cagcctatcggaaatggtagtaatacacttttggaaaataacttaaatccttaccagttt
atgcagcacccggcgctttcgactttacaacagcagcaacaacatcagcaacagcaacaa
caaaagcatagaactcttggccaacttgattcagtaatggcgctgcaacaacatcatcct
accattcaaaaccaacaacataccatactgcaaaaccaacagagccgcatgcaaaatgaa
ttttctgcaaatactttcgtcgacgatgatttagggttcgatccattcactgaaacccaa
aagggtttggctgagctgatggaaaatgaaatagttaaaccacagcattctaaaacaaac
tgcaacactatgcgagtaccaacggagcccaatatgatacatcaacatcagcacaacatg
gataatctgcaaagagcacgcatgcctccaccaggctttaatcacatgaacacctttgga
ttgaatgctcctcgggaacacaacactagcaaaatgatgccattcttgaatatgactggc
aatagagcacacacaaatgatattcaacatttgtcagcttttaatacatgggactcacat
ttacaatcgccacgacatcaactaccaagcttcggcgaattacaggcacatcaaatgaat
caaaataatcggaatgccggtaatttgggcaacgactggaccgcaatggatcctgcaata
ttatcctttcgacaattcccgtcatgccctcaaccgccacaaatgcttcatccccatcaa
caaaaggatttatttcctcaacatttaacacaacaacagcaacaaaataatttcggaaat
ccggctcatggaggtggcaacatgcacctacccaataaccagatcggttcacaatccgct
gctcaagcacaggtcaacgctaatgtccaaggaatgttggagtaccttaaaaatcgtcaa
ttcttttaa
DBGET
integrated database retrieval system
