Anastrepha obliqua (West Indian fruit fly): 129240522
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Entry
129240522 CDS
T09777
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129240522
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
129240522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_14
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_16
TPR_6
TPR_7
ARM_TT21_5th
TPR_9
TPR_Slam
ARM_TT21_4th
ANAPC3
T7SS_EccA1_N
DUF7017
Motif
Other DBs
NCBI-GeneID:
129240522
NCBI-ProteinID:
XP_054732357
LinkDB
All DBs
Position
3:73117134..73122884
Genome browser
AA seq
1128 aa
AA seq
DB search
MSAPIEIPLRDTDEVIEVHPDQLPECQEVLAILRQERSQLNTWVNVALAYYKEKKTGDFI
RLLETARTEGNTDYRDMEKDQMRAYDMLAAHYVQEANREKSKEKKRELFMKATNLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPANIPSLLGKACIAFNKKDYRG
ALAFYKKALRTNPNCPANVRMGMGHCFLKMNNQEKAKQAFERALELDSNCVGALIGLAIL
KLNLHEPDSNKLGVQMLSRAYTIDSTSPMVLNHLANHFFFKKDYQKVQHLALHAFHNTEN
EAMRAESCYQLARSFHAQCDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAA
QCFEKVLKIQPGNYETMKILGSLYANSNSQAKRDMAKSHLKKVTEQFPDDVEAWIELAQI
LEQNDLQTSLNAYATASSILTEKVKVDIPAEILNNVAALHYRVGNLTLAKEKLNEAIQRA
KVEADSSNADKQYYDSISVTMTYNLARLNEAMCSYDVADKLFKDILKEHPNYIDCYLRLG
CMARDKGLIFVASDFFKDALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPATS
TDAYSLIALGNFSLQTLHQPIRDKEKERKHQEKALSIYKQVLRNDPRNIWASNGIGAVLA
HKGCVIEARDIFAQVREATADFSDVWLNIAHIYVEQKQYISAIQMYENCMKKFYKHHNVE
VMQYLARAYLRVGKLKEAKTVLLKARKVAPQDTILLFNIAVVLQRLAMAILKDEKSTLDV
VLQAVHELELAQRYFQYLSICGDKTRFNIEIAGIEANQCQDLLSQAQYHVSRARRIDEEE
KTLRRKQEEERLAFKMKQEEERKRREEEQKTSREQMLVKRQEYVEKTKGILIIPENLSQS
KERKKGGGRPRKDGYVSDSGSDVGEIDGAERSSKKKPKERKKTGGRKRKSAADKYDSDSE
GEVRSKEKKLKKKPKETKEMKNKLSAKQRLKIVSKATISTSESDSDAGGRKRKHSINRDQ
SDDSDGSVASKRVRRISRSPSEQRSHSGSRSNSESRSRSRSRSQSENRSRSGSESVRRSR
SKSNSRSKSPSRSRSVSRSRSPSSSPIRSKNKSSKKSPSRSPSISDSE
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaccgatagaaattcccttacgggacacggatgaagttattgaggtacatcca
gatcagttgccagaatgtcaagaagtactagcaattttacgccaagagcgttctcagctc
aacacctgggtcaacgtcgccttggcatactacaaagaaaagaaaacgggtgactttata
agactactggaaaccgcgagaacagaaggcaataccgactaccgtgacatggaaaaggat
caaatgcgcgcatatgacatgttggctgcacattacgtacaggaagccaaccgggagaag
tcaaaagagaaaaaacgagaattatttatgaaagctacgaatttgtatacaactgctgac
aagattataatgtacgatcaaaatcatttattgggtagagcctatttctgtttattagaa
ggcgataaaatggagcaagcagacgcccagttcaatttcgtgcttaatcaatcgccagca
aatattccttcgcttttaggaaaagcatgtattgcgttcaataagaaggattatagaggt
gccttagcattttataaaaaagctttgcgtacaaatccaaactgcccagcaaacgtgcgc
atgggtatgggccattgtttcctcaaaatgaataatcaagaaaaagcgaaacaggcattt
gagagagcactagaactagactcgaactgtgtgggtgctctcattgggttagcaatccta
aaactcaatttgcatgaacccgactctaacaaattaggtgttcaaatgctgtccagagct
tacactattgactctaccagtccgatggtgctaaatcacctagcaaatcacttctttttc
aaaaaagactatcaaaaagtacaacatttagccttacacgcgtttcataacactgaaaat
gaagccatgagggcagagagctgttaccagctggctcgcagtttccatgctcaatgtgat
tatgatcaagcatttcaatactattatcaatcgacgcaaatcgcaccagctaactttgtc
ctgccgcattacggtcttggtcaaatgtatatatatcgcggtgataccgaaaacgctgct
caatgttttgaaaaagttttaaaaatacagccaggaaactatgaaactatgaagattttg
ggatctctttatgcaaattctaactctcaagcaaagcgtgatatggcgaagtcacattta
aaaaaggtcaccgagcaatttcctgatgacgtagaagcttggattgaattagctcaaata
ctagaacaaaatgatttacaaacgtcacttaatgcttacgctacggcatctagtattcta
actgagaaagttaaagttgacataccggcagagatcttaaataatgttgctgcattacat
tatcgagttggtaatttaacattagcgaaagaaaagttaaatgaagcgatacaacgagca
aaagttgaagcagatagttcgaatgcagataagcaatattatgattctatatctgttaca
atgacctataatttagctcgcctcaacgaagctatgtgcagctatgacgtagccgacaaa
ctatttaaagatatattaaaggagcatccaaactatattgactgttatttacgtttggga
tgcatggcccgtgacaagggtctcattttcgtagcatcagatttctttaaggacgcatta
aatatcaataatgacaatccagatgccagatccttgttgggaaacctacatttggcaaaa
atgcagtttgctttaggacagaaaaactttgaaaccattttgaaaaatcctgcaacttct
acggatgcatattcgttgattgcactaggaaatttttcattgcaaactcttcatcagccc
ataagggataaggaaaaggagcgtaaacatcaagaaaaggctttatccatatataaacag
gtactacgtaatgatcctcgaaacatttgggcctctaatggaattggtgctgtattggcg
cacaaaggatgtgttatagaagcacgcgatatatttgcacaagtccgagaggctacagct
gatttttccgatgtatggttaaacattgctcacatatatgtcgaacagaagcagtacatt
agtgcaatacaaatgtatgaaaattgtatgaaaaaattttacaaacatcacaacgttgaa
gtgatgcagtatttagcacgtgcatacttgcgcgtgggcaaactcaaggaagcaaagact
gttttattgaaagcgagaaaggtagcgccccaggatacgatattactattcaacattgcg
gtggttctgcaacgtttagctatggccatacttaaggacgaaaaatcaacccttgatgta
gtcttgcaagccgtacatgaattggagttagctcaaagatattttcaatatctttcgatt
tgtggcgataagactcgttttaacattgagatagctggtattgaggctaatcagtgtcag
gatcttttgtcgcaagcccagtaccatgtttcccgtgctcgtcgtatagatgaagaagaa
aagacattacgtcgcaaacaagaagaagaacgcctagctttcaaaatgaaacaagaagaa
gaacgtaaacgccgcgaagaagaacagaaaacgtctcgagagcaaatgcttgtgaagcgt
caagaatatgttgaaaaaaccaagggaatattgatcatacccgaaaacctttcccagtct
aaagaacgcaagaaaggaggaggtcgaccccgcaaagatggatatgtttctgattcagga
agtgatgttggtgaaatagatggtgctgaacgctcttctaaaaagaaaccaaaggaacgt
aaaaagactggtggacgaaaacgaaaatccgctgcagacaaatacgatagtgacagtgaa
ggtgaggttcgatcgaaggaaaagaaactcaaaaagaagcctaaagaaacgaaggaaatg
aaaaataagttgtcggccaagcagcgtcttaaaattgtttcaaaagctactatatcaacc
agcgaatcagatagcgatgctggtggacgaaagcgaaaacacagtatcaatagagaccaa
agtgatgatagtgatggaagtgtggcatcgaagcgtgtgcgtcgtatttcaagatcgcca
tccgagcaacgttcacatagtggaagtcggtcgaattccgaatccagatctagatctaga
tcacgctcacaatccgaaaatagatcacgttctggcagcgaatcagtaagacgatcgcgt
tcaaagtcaaattcaagatcaaaatctccttcacgatcgagatctgtttctcgttcacgt
tcaccatcgtcttcaccgatacgttcaaaaaacaagtcttcaaagaaatcaccctcacgc
agcccttcgatttcagattcggaataa
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