Anastrepha obliqua (West Indian fruit fly): 129240651
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Entry
129240651 CDS
T09777
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129240651
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
129240651
3'-5' decay
Other 3'-5' decay factors
129240651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ResIII
zf-CCCH
AAA_19
AAA_22
PhoH
PAM2
DUF4187
AAA_14
AAA_5
Motif
Other DBs
NCBI-GeneID:
129240651
NCBI-ProteinID:
XP_054732556
LinkDB
All DBs
Position
3:complement(107661779..107678516)
Genome browser
AA seq
2522 aa
AA seq
DB search
MTEKEMQAHDMVRRRNWSRAVSLYDQILAQISAAATAITIATANSNNSSVNSNSTALARS
QKDRQIACLLGRCECMLELSRYEQCLADARKVLALLADQSADCLASVSRARRWLVHALCK
LKKYNEAEQLLREWIGELSGQQSFLDISKTLERYKSIIQMINGHKSTQKISQSRLEDEMS
ILDTKLDHWATNNLPLDKYSKLLSNKGLKKAREGGGDRGGGDGRGNGGNNSTNIVGPGQH
NGSIGSGGGSSSISSSSSSGSGSGSGNSTTILQKTTDLLAAIKVTGGKHGMPTAGTAAED
NDNATYCSYCAISFETRNELRQHCQTERHQNVIMSYEGRDWKWRPPPRGFTLDSYSLCEA
YQESQTCHYGNQCVEAHGQDELNEWKERFEYRRMRLQKASEKELYGKSYTEQILDRWIQA
TAPERIMCEKVDGVEVRCEQELVTSISSKSSKREWIFVLKSARVLRAVALLQDAHRNHFA
ITGIKVDGHAPIFDLKSNQEWVSATHKVSSGEKDVTKLAIEFTDTTLSGHIGVATDAQTT
MLEHRVTIEFHTDIYGTFRQTVCFDLGNEPLLVQQLCVDVVPVGDAERIEEIKRDIINSS
VTRWDVSNTNLVKFETTIGTHLKTEAYLNDLKHEKEMLERYPCPRAQTFTLTQSTIVEKR
LTQHNYRSRIHELLYVEEIARYEQIARYNVRTKLTVTSTYILTPAGMATTTAKFSLTGEL
FALMRLGKDISEDTSAGRLILSNCSSVYISAPEEMHTLKDRKRNIYEATIEDKGKNVIYL
KLSAKCVEGMSLKAETEIEVDIQFQLNRLPYCEWHNAVDKITDFKIIFPATEIEPNIPWT
PKKQWSDACEPKLNAKQREAVNAITTSLGIKLPPILLIGPFGTGKTYTLAQAIKQLLTQP
EAKILICTHSNSAADLYIKEYLHPWIEQGLEEATPLRVYYHKRWVATVNSVVQKYCITDG
AGNFRRPSVEDIKKHRIVVVTLSISMELANLGLPKGYFTHIFLDEAAQAMECEAIMPLAL
ANDSTRIVLAGDHMQMSPELFSAFAKERKLHISLLERLYDHYPSNFPCKILLCENYRAHE
AIIKFTSELFYEQKLIASGKQPRHERFYPLTFFTTRGEDVQDKNSTAFYNNAEVYEVVER
VSELRRKWPIAWGKVNDASIGIMTPYADQVFRIRSELRKRRMGGISVERVLNVQGKQFRA
VFLSTVRTRATCLPQMMNALVGPGGMHPAMGGHMGALGSVPAEDTDFGFLSNSKLLNTAI
TRAQSLVAVVGDPVALCSIGRCRKVWERFIEICDENKSLFGITWSYLRSQLDGVELKRGY
VLNPLAPEFIPRAMQPEAYLRDQTAMYLMGAAGVNANNHHGGPHPGAGPHHPGGPLPPHA
AGMLAAAAAAGGGGGPGGAQMQPHHAAMAAAANHQQQMQMQMYAQHPAAAAAYNAAAAAA
VMMNQSMGAGKGGAGGHHFPGPTHGPNHMNMRTLGPHPPGGQQQPGPPPPGPLGQQYNMR
GPPPPPSAVHLPQPPPPGTAGAPPSQFAAQYMPWQQAQQQLRGGPPGGGGAGGNYPPPGA
QPQGPPQSQNPNASLWGPPPQSNPWSALPNKQSQMPPQPPPNNVGAGGGVRPLGPPLPNT
QQQQQAGAGMRGGSVPLQPPPPNAQQLRANSNDMGYLAKKGYGPHAAPGGPQQQAPPPHG
TFGAYVGGNAPPPPPSQLQLLNQRNLGGGMPNGPISPLDPYMQRGQGGNAQAGGPQSATN
FFGGVNNISALSKDNKDFQFLNNVHMPQLNLGGSGAGGGSGGANNLFQPPGALQPPAPGN
NKQQSPSAPRFPQPQEYAALLPPNMSIYDMAFEPKESQYKWCLKLLETHGQEAVNKFTEG
LGQVLNMLNQQQQQQQHVQQMNARGPQMQPPPPPPHLNVNQLLPRDLMQQYMLPALMGGG
NSGVGPQPPMQQQQQQQQQQRNSLIGGGMHHSYPMNPLAAAALGNQQGPPQPPPPPSLLP
PPTDDTAQLDGINFNQQIDLAFNTLLNGNNAQPILRNLFSNTGSRGGNNNSLMNGGDFLL
APNTSTTSLVSTSTSASGGLGNHEPPPPQQQMKLFSSFGGGSAGDLGGGNILVSALQQPL
LNNMQKGPMFAPMQHQQQQQQQHMHGQQPPQQQQPPVGGSFLGGNSLLNSKDYLLGGGDD
SMLSGGSSVPLYRRQAMGNGSLSNNLSNSINASGNSGSASANSQSHSHGHSSSHNSYNNI
GGHTGTSGGGSGNAGGHLLPPPDNILTGGTTDILAGLNTSASNLIEALFQTNSTTSSAPS
SVPNNTITTTTGLEQQQQQPPPQQQQQQQQQQTSGGSNSSSFQKMFNNYDIYGSSAATAK
KYELDLFMRDHQLGGGGGGGAGGGGIGASGNISGSNSGAGDAPLVNNHQVHYHNNNADNR
NSTTYAAVLSQGQHHQQQQQQQQQHHQQQQQQHHQQQQHHAVQQQQQQQHHNNFHHHHPP
HHAEPPTSGVSSTPTSGGAGGNAGSVGGAGTGGGGSIEVEKDLFAAIRELGQGTNGFYNY
FQ
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaaagaaatgcaagcacacgatatggtgcggcggcgcaactggtcgcgtgcc
gtttcgctctacgaccaaatattagctcaaatttcggcagctgccaccgccatcacaatt
gccaccgccaacagtaataacagctccgtgaatagcaatagcacagcattggcgcgttca
caaaaagatcggcaaatcgcctgccttttgggacggtgcgaatgcatgctggagctgagt
cgttacgagcagtgccttgcagatgcgcgcaaggtgttggcattgctcgccgatcagtcg
gcggattgcttggcaagtgtatcacgtgcgcgccggtggctcgtacatgcgctctgcaag
ctgaaaaaatataatgaagctgagcaactgctgcgcgagtggattggcgaattgagtggt
cagcaaagttttttagacatttccaaaacactcgaacgctacaaatccattattcaaatg
ataaatgggcacaagtccactcagaagatctcacagtctcggcttgaagacgaaatgtcc
atattggacacgaaactcgatcattgggctaccaataatctgccgttggacaaatacagt
aaattgctaagtaacaaaggactgaagaaagcgcgcgaaggtggtggcgatcgcggtggg
ggagatggtcgtggtaatgggggtaataactcaactaatatcgtaggtcctggtcaacat
aatggctccataggtagcggtggtggcagcagtagtataagcagtagtagcagtagtggc
agtggcagtggaagtggcaattccacaacaatactgcaaaaaacaaccgatctattggct
gcgataaaagtaacaggcggcaagcacggcatgcccactgctggtacagctgctgaagat
aatgacaatgccacctactgttcttactgtgctattagttttgagacacgtaacgagttg
cggcaacattgccaaacagaacgccatcaaaatgtcatcatgtcgtacgaaggacgcgac
tggaaatggcggccaccaccccgtggcttcacgctggattcatatagtttgtgcgaagcg
taccaagaatcacaaacgtgccattacggcaatcaatgcgttgaagcgcacgggcaggat
gagttgaatgagtggaaggagcgcttcgagtatcgacgaatgcgtctgcaaaaggccagc
gaaaaggagctctatggcaaatcatacacagaacaaatattagatcgctggatacaagct
acagcgcctgagcgcattatgtgcgagaaggttgatggtgtagaggtgcgttgcgaacaa
gagctagtaacgagcatcagttcgaagagctccaagcgtgagtggattttcgtgttgaaa
tcagcgcgtgtgctgcgtgccgttgcattgctgcaggatgcgcatcgcaaccatttcgcc
atcactggcattaaagtggacggccatgcgccgattttcgatctgaaatccaaccaagaa
tgggtgtctgcaactcataaagtgtcatcaggcgaaaaagatgtgacgaagttagctata
gagtttaccgatacaacgctgtccgggcatatcggcgtagcaacagatgcacaaacgaca
atgctggagcatagagtgactatagaattccacacagatatctatggcactttccggcaa
acggtatgtttcgatctgggcaacgaaccattacttgtgcaacaactttgtgtcgatgtt
gtgcccgtcggcgacgccgaaagaatcgaggagataaagcgcgacatcatcaatagttcg
gtaacgcgttgggatgtatccaatacgaatttagtaaaattcgaaaccacaattggcaca
cacctgaagactgaagcctatctcaatgatctgaagcatgaaaaagaaatgctggaacgc
tatccttgcccacgtgcgcaaactttcacgctgacgcaatcgaccattgtcgagaagcgt
ctcacgcagcataattaccgttcgcgcatacacgaactgctgtatgtggaggagattgca
cgttacgagcaaatcgcacgctacaatgtgcgcaccaaactgactgtgacatccacttat
atactgacaccagcgggtatggccaccaccacagccaaattctcgctgacgggtgaacta
tttgccctaatgcggcttgggaaagacatttcggaagatacatccgccggacgtttaata
ctttcgaattgctccagtgtttatataagtgcacccgaggagatgcacacactgaaggac
agaaaacgcaatatttacgaggcaactatcgaggacaaaggcaaaaacgtgatttatcta
aaattgtctgccaaatgtgtggagggcatgagcttaaaggccgaaacagaaattgaagtg
gacatacaatttcagttgaatcgcttgccctactgcgaatggcacaatgccgtggataag
ataaccgatttcaagatcatatttcctgccaccgaaatcgaaccgaacataccgtggaca
ccgaaaaagcagtggtccgatgcatgtgaaccgaaattaaatgcgaaacagcgcgaggca
gtgaatgcgatcactacatcactgggaatcaagctaccgcccatcctgctgatagggccc
ttcggcacgggcaaaacatacacgctggcgcaagcgatcaagcagctattgacgcagccc
gaagctaagattttaatttgtacgcactcgaattcggcggccgatttgtacatcaaagag
tatcttcatccgtggatcgagcaaggcttagaagaagcaacaccgttgcgtgtatactac
cacaaacgttgggtagccactgtgaacagcgtagtgcaaaagtactgcataacagatggc
gcgggaaattttcgacgtccgtctgtcgaagacatcaaaaaacatcgaatcgttgtagta
acactaagtatttccatggagctggccaatctgggcttgcccaaaggttatttcactcac
atctttctcgacgaagccgcgcaggccatggaatgcgaggctataatgcctttggctctt
gccaacgacagcacacgtatcgttttggccggtgatcacatgcaaatgagtcccgaattg
ttctccgcctttgcaaaggaacgaaaactgcacatctcactactcgaacggctctacgat
cattacccatcaaattttccatgtaaaattttgctttgtgaaaattatcgcgctcatgag
gcaatcattaaatttacatccgaactgttttatgagcaaaaattgattgcttccggtaag
cagccgcgtcacgaacgcttttatccgcttacgttttttacaacgcgtggtgaagatgta
caggataagaattcaacagcattttataacaacgcagaagtctatgaggtggtggagcga
gtatccgagctgcggcgtaaatggcccattgcttggggtaaagtgaacgatgccagcatc
ggtataatgacgccctacgccgatcaggtgtttcggatacgttcggaactgcgtaagcgt
cgcatgggcggcatatcagtggagcgtgtactcaacgtgcagggcaaacaatttcgtgct
gtcttcctttccaccgtacgcacacgcgccacatgcttgccgcaaatgatgaacgccctt
gtcgggcctggcggtatgcatcccgccatgggcggtcatatgggcgcacttggtagcgtg
ccagcagaagataccgactttggtttcttgagcaattctaagctgctaaatacggcgatt
acacgcgcacaaagtttggtcgctgttgttggcgatccagtggcgctctgttcgataggt
cgttgtcgcaaagtgtgggagcgttttatcgaaatatgtgacgagaacaaatcattattt
ggcattacgtggtcatacctgcgttcacaattggacggtgtagagctaaagcgcggctat
gtgctgaatcctctggcgcccgaatttataccgcgcgcaatgcaaccggaagcgtatttg
cgtgatcaaacggctatgtacttgatgggcgcggctggcgttaatgcaaacaatcaccac
ggcgggccgcatcccggagcgggaccacatcatccaggcggtccgttgccgccacacgct
gccggtatgttggccgcagcagcagccgctggtggtggtggcggtccaggcggtgcacaa
atgcagccgcatcatgccgccatggccgccgctgccaaccaccaacaacaaatgcaaatg
cagatgtacgcacagcatccagctgctgcagcagcctacaatgcagccgccgcagcggca
gtcatgatgaatcagagcatgggcgctggcaagggtggtgctggtggacatcacttccct
ggtccaactcacggccccaaccacatgaatatgcgcacgttaggaccacatccaccgggt
ggacaacaacagccagggccgccaccgccgggaccgttggggcagcagtataacatgcgg
gggccaccgccgccaccatccgccgtacatttgccacaaccgcctccacctggtactgct
ggtgcgccaccatctcaattcgccgcacaatatatgccgtggcaacaagcacaacaacaa
ttacgtggtggtccaccagggggcggtggcgcaggcggcaactacccaccgccgggcgca
caaccacaaggaccaccgcaatcacagaaccccaacgcaagcctttgggggccgccgcca
caatcgaatccttggagcgcattacctaacaagcaatcgcagatgccgcctcaaccacca
ccaaacaatgtgggtgccggtggaggagtacgtccattgggtccaccacttccaaacacg
cagcaacagcaacaagcgggtgcgggcatgcgtggtggaagtgtaccgctacagccacca
ccgcctaatgcacaacagctacgcgccaactcgaatgacatgggctatttggcgaaaaag
ggctatggaccacatgccgctcctggtggcccacaacagcaggcgcctccaccacacggc
acttttggggcgtatgttggtggcaacgcgccgcctccaccaccaagccaattacaattg
ttgaatcaacgcaatttgggcggcggcatgccgaatggacccataagtccactcgatcca
tatatgcagcgagggcaaggcggcaatgctcaggctggagggccgcagtcagcgacaaac
ttctttggcggtgtgaataacatctcggcgctgagtaaggataacaaggactttcagttt
ctcaacaatgtgcatatgcctcaactgaatttaggcggcagcggagcaggaggtggcagt
ggtggtgctaataatctcttccaaccacccggagcgttgcaacccccagcaccaggaaac
aacaaacagcagtcgccatcagcgccccgtttcccgcagccgcaagagtatgcggcgcta
ctgccacccaatatgagcatctacgacatggcattcgaaccgaaggaatcgcagtacaag
tggtgcctaaagttgctcgagacacacggccaggaagcggttaacaaattcaccgaaggt
cttggacaagtgttaaatatgttaaaccagcaacaacagcagcaacaacatgtccaacag
atgaacgcgcgtgggccgcaaatgcagcccccaccgccgccgccacatctgaacgtcaat
cagttgctgccacgcgaccttatgcagcaatatatgcttcccgctttgatgggcggcggc
aacagcggcgtgggaccacagcccccaatgcagcagcagcaacaacaacagcagcagcag
cgcaacagcttgattggcggtggtatgcatcactcatacccaatgaacccactagcagcc
gctgctctgggtaatcaacaaggaccaccgcagccgccaccgccaccctctttgctgccg
ccgccaacagacgatacagcgcaattggatggcatcaattttaatcagcaaatcgatttg
gccttcaacacgctgttgaatggtaacaacgcacagccaatattacgcaacctcttcagc
aacacgggtagtcgaggtggcaacaacaacagtctaatgaatggtggcgactttctgctg
gcgcccaacacatcgacaacctctttggtcagcactagcacatcggcgtccggtggattg
ggtaatcatgagccaccaccaccgcagcagcaaatgaaactgttttcaagcttcggtggc
ggcagcgcaggtgatttgggtggtggaaatattttggtttcggctttgcagcaaccgctg
ttgaacaatatgcagaagggaccgatgtttgcgcctatgcaacatcagcagcaacaacaa
caacagcacatgcatgggcaacagccaccacagcagcagcagccgccagttggtggtagt
ttcttgggaggaaattccttgttgaatagcaaagactatttgctgggtggcggcgatgac
agtatgctgagcggtggctcaagtgtgcccttatatcggcgtcaagcaatgggcaacggt
agtctgagcaataatttaagcaacagcatcaatgcaagcggcaatagcggtagtgctagc
gccaacagccaaagccacagccacggccacagtagcagtcacaacagctacaataacata
ggcggccataccgggacaagcggcggcggcagcggcaatgctggcgggcatcttttgcca
ccgcctgacaacatacttaccggtggcaccactgacattctagccggtctgaacacgagt
gcaagtaatctgatcgaagcgctgttccaaacgaattcaacaaccagttcagcgcccagt
tcggtgccgaataacacaattacaacgaccactggattagagcaacagcaacagcagcct
ccaccacagcagcagcagcaacaacagcaacagcaaacgagtggcggcagcaacagtagc
tcatttcaaaagatgttcaacaattatgacatttatggctcgtccgcagcgacagcgaag
aaatatgaattggacttatttatgcgcgaccatcagttgggtggtggcggtggtggtggt
gctggaggcggaggtattggtgccagtggcaatattagtggcagcaatagtggcgctggc
gatgcaccgcttgttaataatcatcaggtgcattatcacaacaacaatgccgataatcgc
aacagtaccacatatgcagcagtgcttagccaaggtcaacatcaccagcagcaacagcaa
caacaacagcagcatcatcagcagcagcaacagcaacaccatcagcaacaacagcatcat
gcagtacagcagcaacaacaacaacaacaccataacaatttccatcatcatcatccaccg
caccatgccgagccgccgactagcggagtgtcatcaacaccaactagtggtggcgctggt
ggtaatgccggtagtgttgggggcgctggcactggtggtggtggtagcattgaagtggaa
aaggacctctttgcggccatacgtgaactaggtcaaggcacgaatggattctacaattat
tttcaataa
DBGET
integrated database retrieval system
