Anastrepha obliqua (West Indian fruit fly): 129240927
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Entry
129240927 CDS
T09777
Name
(RefSeq) uncharacterized protein LOC129240927
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129240927
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129240927
5.6.2.5 RNA 5'-3' helicase
129240927
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129240927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
FHA
Yop-YscD_cpl
AAA_19
AAA_30
UvrD-helicase
AAA_16
SLFN-g3_helicase
Helicase_RecD
AAA_22
NPHP3_N
nSTAND3
ResIII
Motif
Other DBs
NCBI-GeneID:
129240927
NCBI-ProteinID:
XP_054732976
LinkDB
All DBs
Position
3:complement(92476599..92496144)
Genome browser
AA seq
1846 aa
AA seq
DB search
MAGRMNRVLSSWILERKVIGDRIRLNVGITAIGRMPGTALCILDSQYVSRKHAEIIVDEH
GKIVLRDLDSANGTFVNGTNIKNESIALNANDCLGIGVTDDFEPDLKHPIYKLIYAPMQR
AASIDQEHVRNDEQQIVNYPLPANARPDNQKILEKETDGNASISSEKSSPSTSTINQLEY
KCETVARSNNIDSAISGIDIISATTSKTSGDLNQLPISGISHKVVDSLPSAATAAKKSEQ
ISPNVKCAPSLSNAPTLFSGAIIIVSDDEDDVITLIKEENIQSQIDNKSECIQNVQSSDQ
EICNKSNEVPPNKSSSTKDTISMLQAPNDAAIHEPILPEVKREFIRSCTENVVEIFGRAD
DIILDSVKGISPLVYTTLNGRNSNKMLYDGDSIDLLSDNEDDGANIAEYVESFGKLVPEI
GEKQNSTKTKENIAVNNILLDNSLNSSKNNGDEQKGLNVGQASVSGENQDVEIKTEKCTK
MPEEPAEFVDIDDDMWFSQILINDIKSEMMADNNEADLPAEDDAPDDDMLKNDGQDNLLE
VFIKKEIIDNDLSNPVSITAKQESKSAEIENDVWITIDDDEEFEHQVSDWSTKLLSQKMN
MSQVFELQSDKQQDLDENNQNAGKEGNLKLDCNSEDFDELFNEALVDDVIETLAKKNGET
KNETRAPSLERQLSSYSDSNNDFERNKELLPKREEVKIHDNYSGAATERKASPASTGAPE
DLKAGISSKSFRRLEKDLNSDSKESITSKEKVELRKDLIKPVKRLRHPPSVIEAPNLPKH
KGKHRGVSAESRPTAVCTNNIRKKAIAVSGQLKDEAYREELKRKWFEKPADERRREKEKR
RLIQESRKERLKELAGKQSADSAKELLKRKHDSEHESGERKKAKVKITTRNRGALLAEDI
GAVKKNIGSYKIPKIKQCSSDITNAHREPPITDTATTSKPNHSTVVDAFAQEMRKVDKII
SRRFYTSSSSKKLSSVEENKNENTLEETKINAPVRRINKITFASMQKNFAETRKNQELLQ
KFAINRSCLIDVVHRNANKERQKKRVRFNDTPIVHLIERVNGANKRVDRKDILPSPTCAD
RAHMIRSAYKMIDQTAEIISKILGWSNEWLVNRNAHVDAASDIVLPMPNQFTTFNHYKSI
ITPLMKLEFISVLEREKNRCKSKTFIISAEQVTPSTDRFRIMGRYAGVNNSGSKSELVVL
EWGKFTAFAYMSGRRLGFNTTTVVYEVLAEGLLLEELRSCLNTPMKVRPMIDIVRVEVGA
FNAVFQLEQSPLLNQILDPRQLCKLKPLPKCDIQYNGCDDLNDRQKDILFRTYRRAIEPT
PNITLIQGPPGTGKSCVIANLVHQLLYGNEVRILDQKVLVCAQSNAAVDVIAEKLYIMSQ
KKLPEVMFRLIRFGLMDRISPKVHHVTLPKIIERNQIRKLKMSHKNLQIDEKVHIKEYLR
NEIVQLEAAIEAMKLKNVKGTVQEEELLEKTRQVQLMQNIVNGVLRPEDERSLYNWHLKH
AHVVCTTLSSCVKLSQYINYFDVCIIDEATQCTEPWTLMPLKFGINALVLVGDTQQLPAT
VLSKKASDFGLGTSLFTRIQRCIESVNLKNVPNGLNAHEKTSVSNKNDIIFSLRTQYRMH
PEICKWPNSYFYKNQLIDDPKTHKFKPVLKPFSILNLTYTQDENCLRGQIVNELEAKFVA
RFVKTLDGYIPMKYNTYGVITPYAQQRGALEKALRTAGFSNVMVNTIDSYQGMERDVIII
SNARTNGIGFLVNYQRLNVALTRPKKCLILCGNFKNLETVPAWRSLLAAARERKLYHELS
ADCMDDMHRNVIPRIKISKAAAATEVAAATTSKELAVVAGTSNQAG
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggctggccgcatgaatcgtgtactatcttcctggatcttggagcggaaggtgattggc
gaccgtatacgccttaacgtgggtatcacggctataggccgaatgcctggaactgcacta
tgcatattagattctcaatatgtctcgcgcaaacatgctgaaattattgtagacgaacat
gggaaaattgtactaagggacctggattctgcaaatggaacttttgttaatggaactaac
ataaaaaatgaatcgattgccttaaatgcaaatgattgcttaggtattggtgttacggat
gatttcgaacccgatctaaaacacccaatatataaactaatatatgctccaatgcaaaga
gcagcgtccattgatcaagagcacgttagaaatgatgagcagcaaattgttaactatcca
ctacctgctaatgccagaccagataatcaaaaaatcttagaaaaagaaacagacgggaat
gcctcaatttcctcagaaaaatcttctccatcgacttctacaataaatcagttggagtat
aagtgtgaaacagttgcaagatcaaataatattgattcggcaatttcaggcatcgacata
atttctgcaaccacgtctaagacaagtggtgacctaaatcaacttccaatttcaggaata
agccataaagttgttgactcccttccatcagctgcaacagcagcaaaaaaatctgaacaa
atatcacccaatgttaagtgtgctccgtcattatcaaatgcgccaacactattctctggt
gcaatcattattgtgagtgatgacgaagatgacgttataaccttaatcaaggaagagaat
atacaatctcaaattgacaataaatccgaatgcatacaaaatgtacaatcatctgaccaa
gaaatatgtaataaatcaaacgaagtgcctccgaataaaagttcttcgaccaaagataca
atttccatgttgcaggcgccaaacgatgctgccattcatgaacccatattacctgaggtt
aaacgtgaattcatacgttcatgcacagaaaatgtagttgaaatatttgggagggctgat
gatataattcttgatagcgtcaagggaataagtcctttagtatacacaactcttaatggc
agaaattcaaataaaatgctttatgatggagatagtattgacttgttaagtgacaacgag
gatgacggtgctaatattgcggaatatgtggaaagtttcggtaaattagtacccgaaata
ggagaaaaacaaaactctactaaaaccaaggaaaatatcgctgtaaacaatattttgttg
gataattcattgaacagctctaaaaacaacggcgatgaacaaaagggtttgaatgttggg
caagccagtgtttcgggagaaaatcaagacgttgaaattaaaactgagaagtgtacgaaa
atgccagaggagccggctgagttcgtagatatcgatgatgatatgtggttttcacaaatt
ttaataaacgacatcaagtctgaaatgatggctgataataatgaagccgatttgcctgct
gaagatgatgcacctgatgatgatatgctaaaaaacgatggtcaagacaacttgctggaa
gtgtttattaaaaaagagataattgataacgacctgtcgaatccagttagtattacagca
aaacaagagtcaaaaagcgctgaaatagaaaatgacgtgtggattacaatagatgacgat
gaagagttcgagcatcaagtatcagactggagcactaagctgttgtcacaaaaaatgaat
atgtcgcaggtatttgagttgcaaagtgataaacaacaagatttagatgaaaacaatcaa
aacgctggaaaggaaggaaatctgaagctagactgtaacagcgaagattttgatgaactt
ttcaatgaggctcttgtagatgacgtgattgagacattagccaaaaaaaatggcgaaact
aaaaacgaaactagagcgccatcattggagcggcaactctcaagttacagtgacagcaat
aacgatttcgagagaaataaggaattgttaccaaaacgagaagaggttaaaatacatgat
aactacagcggagcagcaactgaaagaaaagcaagtcctgcttcaactggagcccccgaa
gatctgaaagctggtattagtagtaaaagttttagacgtctggaaaaagatttgaactct
gacagtaaagaaagtattacctctaaagagaaggtagaactgcggaaagatttaataaaa
ccagttaaacgcttgcgtcatccaccttctgtaatcgaagcgccaaatttgcctaagcat
aagggtaaacacagaggagtttctgcagaatctcgtccaacagcagtatgcacaaacaat
atccgcaaaaaagccattgcagtcagtgggcaactaaaagatgaagcttatcgagaggaa
ctaaaaaggaagtggtttgaaaagccagcagatgagaggcgtagggaaaaggagaagaga
cgtctcattcaagagtcacggaaggaacgtttaaaagaacttgctggcaagcaatcagct
gactcggcaaaggaattgctaaaacgtaaacatgactctgaacatgaaagtggtgaaagg
aaaaaggctaaagtgaaaatcactacaaggaatcgtggtgctcttctggcggaagatatt
ggagctgtcaagaaaaatataggttcgtacaaaatacctaaaatcaagcaatgttcctcc
gacataacgaatgcacacagagagcctcccataactgacaccgcaacgacaagtaagccc
aatcattcgacagttgtggatgcttttgctcaggagatgcgcaaagtagacaaaatcatt
agccgtcgattctataccagcagtagcagtaaaaaattatcctctgttgaagaaaacaaa
aatgaaaatacgctagaggaaactaaaataaatgcacctgtgcgtagaataaataaaatt
acatttgcttctatgcagaaaaattttgccgaaactagaaaaaatcaagagttgttacag
aaatttgccattaatcggtcttgcctgatagatgtggtacaccgcaatgcaaacaaagaa
cgtcaaaagaagcgcgtacgctttaatgatacgccaattgtgcatttaattgaacgggtt
aatggcgccaataagcgagttgatcgaaaagatattttgccaagtccgacttgtgcagat
cgagctcatatgatacggtcagcgtacaaaatgattgatcagactgcggaaatcatatca
aaaatattaggttggagcaatgaatggctagtaaatcgtaatgcccatgtggatgctgct
agtgatattgtgttgccaatgccaaatcaatttactacattcaatcattataaaagcata
attacaccgttgatgaaattggagttcataagtgtacttgagcgtgaaaaaaatcggtgt
aaatctaagacatttattatctccgccgaacaagtaaccccgtctacggaccgctttagg
ataatgggccgctatgctggggtgaataactctggttccaaaagtgaacttgttgtattg
gaatggggaaagttcacagcattcgcatatatgtcaggaaggcgtttgggctttaatact
actaccgttgtgtacgaagtgcttgcagaaggtttacttttagaagagctccgtagctgc
ctcaatactccaatgaaagtccgcccgatgatagatattgttagagtcgaagttggcgcc
tttaacgcggtattccagttggagcaatcgccattactcaatcaaattcttgatccaagg
caattatgcaagttaaagccgctcccgaaatgtgatatacaatataacggttgtgatgat
ctaaatgatcgccaaaaggatattttgttccgtacatataggcgtgccatcgaaccaacg
ccaaacattacattaatacaaggcccgcctggtactggtaaatcttgtgtaattgccaat
ttggtgcaccaattactctatggtaatgaggttcgcattcttgatcaaaaagtattagta
tgtgcacaaagtaatgcagctgttgatgttatcgctgagaaattatacattatgagtcaa
aaaaaactgccagaggtaatgtttcgattaatacgttttggtttgatggatcgtatcagt
cccaaagttcaccatgtcactttaccaaagattatcgaacgtaatcagattagaaagctc
aaaatgtctcacaaaaatcttcaaattgatgagaaagtccatataaaggagtacctacga
aacgaaatcgttcaactcgaagctgctattgaagctatgaaactgaaaaacgttaaagga
actgtgcaggaggaagaattgcttgagaaaacgcgacaagttcaattaatgcagaatata
gtgaatggcgttttacgtccagaggatgagcgtagtctgtataattggcatttgaagcac
gctcatgttgtgtgtacgactctttctagctgcgtgaaattatcacaatatataaattat
tttgatgtttgcatcattgacgaggcaacacagtgtacagaaccatggactctaatgcct
ttaaaatttggtattaatgcgttggtgcttgttggtgatacgcaacagctcccagcgacg
gtactttcaaagaaagcttcagatttcggtctcggtacttcactttttacacgtattcaa
cgctgcatagaatcggtcaatctcaaaaatgtgcccaacggattaaatgctcatgaaaaa
acatccgtatcaaacaaaaatgatattattttcagcttacgaacacaataccgcatgcat
cctgaaatttgtaagtggccaaattcttacttttacaaaaaccaactgatagatgatccg
aaaacacataagttcaaaccagtattgaagccattttcaatactgaatctcacgtatacg
caagacgaaaactgtctccgcggtcaaattgttaatgagctggaagcaaagtttgtggca
cgctttgtgaaaactttagatggctacatacctatgaaatataatacttacggtgtgata
acgccttatgcgcagcaacgaggtgcattagaaaaagcgctgcgaactgctggattctca
aatgtgatggtaaacacaatcgactcttatcaaggcatggaacgtgatgttattattatt
tcaaatgcgcgcactaatggcataggatttttggtaaattatcaacgtttgaatgtggct
ttaactcgtccaaaaaagtgccttatactgtgtggaaacttcaaaaatttagagacagtt
ccggcttggcgtagccttttggcagcagcacgcgaacgcaaactgtatcatgagcttagt
gccgattgtatggatgatatgcacagaaacgtgattcctagaataaagatttcaaaagcg
gcagctgcaacagaagtagcggctgcaacaacgagcaaagagttagctgtggtagccgga
acatcaaaccaagcaggataa
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