Anastrepha obliqua (West Indian fruit fly): 129241012
Help
Entry
129241012 CDS
T09777
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129241012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoq04121
]
129241012
Enzymes [BR:
aoq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129241012
Ubiquitin system [BR:
aoq04121
]
Ubiquitin ligases (E3)
HECT type E3
129241012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
129241012
NCBI-ProteinID:
XP_054733104
LinkDB
All DBs
Position
3:72952808..72957708
Genome browser
AA seq
1050 aa
AA seq
DB search
MSIFCWGNTEHGELGLGDIEEEKVLDPREMPWKPESVVISIGCGLEHTVFLTADGKIYSC
GCNDFGQLGHQQMTTRPQLINDLENTVITKISCGARHSLALSEWGQLYSWGHNDYGQLAL
PDGSDIVRSPKIVKKLATQTVIQIASGYNHCLALTNCGALYSWGSNIYGQLGLSPPNELA
HSAHPRLVDSLVGIPIAFITCGDNHSFIISKSGAVFGWGRNNCGQLGLNDCTQRHFPTQL
RTLRSLCVRYISCGEQFSVFLTNDGGVFTCGKGSYGQLGHGGNMNEVLPRKVTELMGSTV
TQISCGAKHTLGLVPSRGRVYGFGLGCFGQFGASKVNICSLPQVIVGPWVSPSCSKLLNI
EPKENLDTDFLIRQIFCGGNNSFVTTSNMPTVDFRIYEPKSQIMCLTSELAEQCATIEKN
SSIDLDLLTTIEVIFKSQACINGSFLLENKHFCCTSKQPGVDLAEVKQTFDNIRKVEHES
LKQIIWDKITNEIIASLMPSPADVETLRLYLILPLYHEFVNSKNYENLHTPFSNAVLRLK
EIPRKIVIMWWAHTPLDWFESLVSNYKNVVAHIISFRISANSGGSFEKKLVTYNSNLSAA
LNLLVVLHRINHKERAEKVDYDIFHWPELTDYVDIQQDYIHWLFEKNPDSFNICNYPFLF
NASAKTTLLQTDQAIQMHTAMQNAANSGILSLLTFGTPISQFIVLNVSRENLVQDTLREI
MQYNQSDLKKPLKIKFHGEEAEDAGGVRKEFFMLLLRDLLDPKYGMFKEFENSRALWFAD
VTFETEDMYFLIGVICGLAIYNFIIINLPFPLALYKKLLDEPVDLGDLRDISPTLANSME
SILNYDQIDFEEVFNLNFEISRDIFGESKTEELKPNGSQTTVTLENRKEFVDLYVDFIFN
KAVETQFSAFRKGFMKVCWGRVLQIFKPDELMAVVVGNEEYDWQAFELQCEYKNGYNSGD
QTIRWFWEVFHDFPESEKKKFLLYLTGSDRIPIQGMKAIKICIQPTNDERFLPVAHTCFN
LLDLPRYKTKERLKYKLLQAIQQTQGFSLV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtctatattttgctggggcaacacagaacatggcgaacttggacttggcgacattgag
gaagaaaaggttttggatccacgagaaatgccctggaaaccagaaagcgtagtgatcagc
ataggatgtggcttagagcatacagtgttcttgactgcagatggaaaaatatattcttgc
ggctgtaatgattttggtcaattgggccaccaacagatgacgactaggccacaactcata
aatgatctcgaaaatactgtgattacgaaaataagttgtggtgcaaggcattcgttggcg
ctcagtgagtggggtcaactatacagctggggtcataacgattatggtcaactagcactt
ccagatggatccgatattgtgcgttcaccaaaaattgtcaagaaacttgctactcagact
gttattcaaatcgcaagtggatataaccactgccttgcactaactaattgtggcgccttg
tattcttggggttcaaatatttatggacaattgggcctctcgccgccaaatgaattggcc
cactctgctcatccccgattagtagactcattggtggggattcccattgcttttattaca
tgcggagacaatcactcgttcattatctcaaaatctggggctgtgtttggttggggacgg
aacaattgcggacaattggggctgaatgactgtacgcaaagacattttccaacgcagcta
agaacactacgcagcctttgtgtgcgttacatttcctgtggggaacaattctctgtattt
ttaacgaacgacggaggagtatttacttgtggtaaagggtcgtatggccaacttggtcat
ggcggcaacatgaacgaagttctgcctcgaaaagtaacggagctaatgggtagcaccgta
acgcaaatttcttgtggcgcgaaacatacactaggcttagtgccatctcgaggtcgggtc
tacggatttggtttagggtgttttggacagtttggggcaagcaaagtgaatatttgttcg
ctgccgcaagttatagttgggccttgggtatctcccagctgttcgaaactactaaatatt
gagcccaaagaaaatctagacacagatttcttaatacgacaaatcttttgtggtggtaat
aattcgtttgtaactacgtctaatatgcctacggtggattttcgcatttatgaacctaag
tctcaaatcatgtgtttaactagtgaattagcggaacagtgtgcaacgattgaaaagaat
tcctcaattgatttggatttactaacaaccattgaagtgatttttaaaagccaagcttgt
ataaatggttctttcttgttagaaaataagcatttctgttgcacgtcaaagcaacctggt
gtagatttggcagaagttaaacagacatttgataacatacgcaaagtagaacatgaaagc
cttaagcaaatcatttgggacaaaattacaaatgaaataattgcatcgttaatgccatca
ccggcggatgttgaaactttaagactttatttaatattgcctttatatcatgaatttgtt
aattctaaaaactatgaaaatctacatacacccttcagcaatgctgttctacgactcaaa
gaaataccgagaaaaattgttataatgtggtgggcacatacaccacttgattggtttgaa
agcttggtatccaactacaaaaacgtggtggcccatataatcagctttagaatatctgct
aactccggtggtagctttgaaaagaagctcgttacttataactcgaatttgtcagcagct
ttaaatttgctagttgtgcttcaccgaattaatcataaagaacgtgcagaaaaagttgat
tacgacattttccactggccagagctgacagattatgtcgatatccaacaagattatata
cattggctcttcgaaaaaaatccagactcttttaatatctgtaattatccgtttttgttc
aatgcgtcagctaaaactacacttctacagacggatcaagctattcaaatgcatactgcc
atgcaaaatgctgctaattcgggtatactttccttactaacatttgggacgcctatttcg
cagtttattgtgttgaatgtttctcgcgagaacttggtgcaagatactttacgagaaata
atgcaatataatcaaagtgacttgaaaaaaccactaaaaataaaatttcatggtgaagag
gcggaagatgctggcggtgtccgaaaagaatttttcatgctcttactaagagatctttta
gacccaaaatacggaatgtttaaagaattcgaaaactcacgcgctctgtggttcgctgat
gtaacatttgaaaccgaagatatgtacttcttaattggtgtaatttgtggcctagcgata
tacaattttataataataaatttgccattcccgttggcgctttataaaaaactgcttgat
gagcctgttgatcttggtgatttgcgcgacatttcaccaacgttggctaattctatggaa
tccattttaaattacgatcaaattgatttcgaagaagttttcaatttaaattttgaaata
agtcgtgatattttcggagaatcgaaaacggaggaattaaaaccgaacggaagtcaaaca
actgtaactttggaaaatagaaaagagttcgtggatttatatgttgattttatatttaac
aaagcagtggaaacacaatttagcgcgtttcgtaaaggatttatgaaggtatgctgggga
cgggtattacaaatattcaaacctgatgaattgatggcggttgttgtaggaaacgaagag
tacgattggcaagcgtttgagctgcaatgtgaatataaaaatggttacaattctggagat
cagacgatacggtggttttgggaagttttccatgactttccggaaagcgaaaagaaaaag
ttcttactatatttgacaggaagcgatcgtattcctattcaaggaatgaaagcaatcaaa
atttgtattcaaccaacaaatgacgaacggtttctccccgtagcgcatacgtgttttaat
ctattagatttgcctcgttacaaaactaaagagcgtttaaagtataagttgcttcaagcc
attcaacaaactcagggttttagtctagtatga
DBGET
integrated database retrieval system
