Anastrepha obliqua (West Indian fruit fly): 129241094
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Entry
129241094 CDS
T09777
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoq03036
]
129241094
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129241094
microRNA pathway
RISC loading complex
129241094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129241094
NCBI-ProteinID:
XP_054733232
LinkDB
All DBs
Position
1:172623652..172632165
Genome browser
AA seq
2316 aa
AA seq
DB search
MSFHWCDNIHTTIFTPRDYQIELLSAAFERNVMICLGHKSSKEFIALKLLQELARPARIA
EKINLYLTCEQNAPSITTMIEHLTDLKVYKEERTGAADKQEIHIPKDFQLYVLHPRTCLA
ALRCGKLSMTNVHLLILEDCHEAEVYRDLRQIFEDHFNVSGKDMPKVLGLAGPLHSAECS
LEELSAMLNTLEDSVHCKAETASDIVTVLRYCAKPSEYIVQCTPYPRDELTAVLEEVICT
RKAFLIDHRYDPFEIYCTEEYMEELKDIPDPKEEPMEFLEIMLFVLYEMGPWCADRVAVN
MFHRIEKQKIKTPHERHYILLCVVNTALLEFHAICEQTFKKFNNHKELVERYSSPKVFRL
LEILRLFKPEELLTKNETIQKMSQDLDQMDFQKLSRSIEYSCQNVENVTTKLQLESRSIM
DNLDPIVKSPTTDVAKQQTLQANTTHKTESSASTNRRHGVGGSHGRFKRRPFSRRQMRDS
GDALDTLCAIIFCNSNYTARVLFDLLSEMSRHDPELKFLKCQFTTDRVADPITEPKEAEV
EHRRQEEVLKRFRMHDCNVLIGTSVLEEGIDLPKCNLVVRWDAPTTYRSYVQCKGRARAA
PAYHVILVSPAYNAILCENEQLSDQSHRYLCKLEVGQDDVIDTDSCSDDEEECNGKSNKF
TIGSSKGIVKILNPEVITSKPPTKCEITLKEIKDELPAIKGIENEDTNTIDLVEIESELA
PITELQNETSSIKEVKTKSVANESLHDCFDVLDLSDMISDISSNNSSRIVLEETATTPAS
ASVTPKQKKEKRRFRCICENENCAQHGLETGLDATINQIEITTNKIVEQLAEYREIEKML
LQKCANTEPSEAEHQLADYFNKCVKRYKPCEHLLTGASVDLTSSIALVNKYCSKLPSDTF
TKLTALWRCTKTIRCGVEMYQYTIRLPINSPLKYDIVGLPMSSNILARRMAALQACIELH
KTGELDDNLLPIGKEGFRAMEPDWENFDLEEEDDKIVLENSEPRPGTTKRRQYYYKRIAS
EFSDCRPTAGVPCYLYLIDLTLQCPIPEEQNTRGRKIYPPEDAQQGFGILTLKRIPKVSS
FPIFTRSGEVKVSIVLAKERVVLTETQIRCINTFLNYTFTNVLRLQKFLMLFDPDSTENC
VFIVPTVKRDGGKVIDWDFLELIERNASMMPTPVPEELRKSIDFDANKFKDAVVMPWYRN
QDQPQYFYVAEICPQLSPQSCFPGENYRTFKHYYFLKYGLTIQNVKQPLLDVDHTSARLN
FLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASLWRTAVCLPCIL
YRINGLLLADDIRKKVSLDIGLGQQEIPDDFEWPMLDFGWSLSEVLKRSKENNASMDKKT
EEQKEKEANNKQSNGFAKDIGVNGEFCAEDNQTKAKSANEIIIEGEKKLKDSNFIEIGTW
SNDMANDINFNKYSDSLDDDEEECLKYFPSNVSFCDQQMRYGSPTFWDVKESQLNKKPDD
CAQSKNTTDTNNFRKNSFAYYDSDDSFASSYDGNEPTNYSEDDDDECGPLRIAFTSRNEA
ETIETDQEIEKRNKKLSIIQATNANERNYQKTKNLLVGYNFEDLKPNIEAELCDSIAKFT
ASTRLLKANIEQSGMLVKYNQPVMLARKERTTNESAAHGEAATTEAFLKLLPYADKDVLM
SILSKQANVLTIADIARLNADYLKSHPLELFEIQGCGDIFDNFNDKDMLKLEGWGEGYKK
LIKLNFERKASATGCVSLIDVKKQESKNMQGNTFSFDRQPDLAGHPGPSPSIILQGLTMS
NANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKK
LGEYMIATKFEPHDNWLPPCYYVPKELEKELIEAKIPPHHWKLVDLANIKKLNSAEICAL
VREKADKLGLFGDEYNCSEDASAVDEIAEGNDFSCFIPYNLVTQHSIPDKSVADCVEALI
GAYLIECGPRGALLFMAWLGIRVLPFVRKPYNPQEPRIPGSSNPDVNGEITVYGEWTAPK
SPLLHYSPNAPQELESMLEGFDEFENTLGYKFRDRSYLLQAMTHASYSPNRLTDCYQRLE
FLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGL
NEVIDRFVRIQNENGHSISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMS
LDVVWQVYSNMMKPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVF
CKGTFRGIGRNYRIAKCTAAKCALRQLKKQGLIKKD
NT seq
6951 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccactggtgtgataacattcacaccacaatttttacccctcgtgattatcaa
atcgaattgctatctgccgcgttcgagcgtaatgtaatgatatgcctcggtcacaaatca
tccaaggagtttattgccttaaagctcctacaggagttggcacgaccagcacgaattgcg
gaaaagattaatttatacctgacctgtgaacaaaacgctccatctataacaacgatgata
gagcacttgactgacttgaaagtgtacaaagaggagagaacgggggcggcggataagcag
gaaattcatataccaaaagactttcaactttacgtacttcatccacgtacttgtctggca
gccttgagatgtggaaagctaagtatgacgaatgtgcatttgttaatactggaagactgt
catgaagcggaggtatatagagacttgcgtcaaatctttgaagaccatttcaatgtttcc
ggcaaagacatgccgaaagtgttgggcttagctggaccacttcacagcgctgaatgctcg
ctagaagaactcagtgcaatgctgaatactttggaggatagtgtgcactgcaaagcagag
acagccagtgatatcgtaacagtattaaggtattgcgccaaacctagtgagtatatagtg
caatgcacgccatatccgcgagatgagctgaccgctgtgctagaggaggtaatttgcacg
agaaaagcgtttttaatagatcaccgttacgaccctttcgaaatatactgtacagaagaa
tatatggaggaattaaaggatattcccgatccgaaagaagaacccatggaatttttggaa
atcatgctctttgtgctctacgaaatgggcccgtggtgtgcagatcgtgttgctgtcaac
atgtttcaccgcatagagaaacagaaaataaaaacgccacatgaacgccattacattttg
ctttgcgttgtgaatacagcgcttctagaatttcatgccatttgcgaacaaacattcaaa
aaatttaataatcataaagaattagtggaacgctattcgagccctaaagtttttcgtttg
ctggaaattttacgattattcaagccggaagaattattgaccaaaaacgaaacaattcag
aaaatgagtcaggatttggatcagatggattttcaaaaactcagccgaagtatcgaatat
agttgccagaatgtggaaaatgtgactacaaaactacaactcgaatcacgctcgattatg
gataatttagatccaattgtaaaatcgcccacaactgatgtggcaaaacagcagacattg
caagcgaacacaacgcacaaaacggaaagttccgccagtacaaaccgacgccatggtgtc
ggtggttcacatggccgtttcaaacggcgaccttttagccgccgacaaatgcgtgacagc
ggtgatgccttggatacgctctgcgctattattttctgcaactccaattacacggcacgt
gtgctttttgatttactgagcgaaatgagccgccacgatccggaactgaaattccttaaa
tgccagttcacaactgaccgtgtcgctgatcctataaccgaacccaaggaagctgaggtc
gagcataggcgtcaggaagaggtattgaaacggtttcgtatgcacgactgcaatgtctta
attggcacctcagtgctagaggagggcattgatttgccaaagtgtaatttagtagtgcgc
tgggatgcacccacaacatatcgtagctatgtgcaatgtaaagggcgtgcgcgagcagca
ccggcttaccatgtgatactagtatcgccagcttataatgcaattctttgtgaaaacgaa
cagttaagtgaccagagccataggtatttatgtaaattagaggttggccaggacgacgtt
atcgatacggattcatgtagcgacgatgaggaggaatgcaatggcaagagtaacaaattt
acaatcggttcttcaaagggaatcgtaaaaatattaaatcccgaagtgattaccagtaag
ccaccaacaaaatgcgagattacgctcaaggaaatcaaggacgaattgccggccattaaa
ggcatagaaaatgaagataccaataccattgatttagtagaaattgaaagcgagttggct
cctattacggaactgcaaaatgaaacatcttcaataaaggaagttaaaacgaagtcagtg
gccaacgagtcgctacatgattgtttcgatgtgctcgatcttagcgacatgatttcagac
attagcagtaataactcttctagaattgtgttagaagaaacagcaacaacaccggcttca
gcatcagttacaccaaagcaaaaaaaggagaagcgtcggtttcgctgtatctgtgaaaat
gaaaactgtgcacaacacggtttggaaaccggcctcgatgctactatcaaccaaatagaa
atcacaactaataaaatagtggagcaattggccgagtatcgggaaatagagaagatgctt
ctacaaaaatgtgctaatactgagccatcggaagcagaacaccaactggcggactatttc
aacaaatgcgtgaagcgctacaagccctgtgaacatctgctgacaggtgcttctgtggat
ctcacttcatccatcgcgttagtcaacaaatactgctccaagttgccaagcgacacattt
acaaaactcactgcgctctggcgttgcacaaaaaccattcgatgtggtgtcgaaatgtac
caatacacaatacgtcttccgataaattcgccattaaaatatgatatagttgggcttcca
atgtcttcgaatatattggcgcgtagaatggccgcattacaagcatgcatagagctgcac
aaaactggcgagctggacgacaacctgctgccaataggaaaagagggatttcgtgctatg
gaacccgattgggagaactttgacttggaggaggaagatgacaagatcgtacttgaaaac
tccgagccgcgcccaggcactacaaaacgcagacagtattactataagcgaattgcctcg
gagtttagtgattgtcgtcccacagccggtgttccttgctatctgtatttaatcgacttg
actctccagtgccctattccagaggagcaaaatactcgtggccgtaaaatatacccgcct
gaagatgcgcaacaaggttttggtatacttaccttaaagcgtataccaaaagtcagttca
tttcctatatttacacgttccggcgaggtaaaagtgtccattgtgctcgctaaagagcgg
gtggtactcaccgaaacacaaatacgctgcatcaatacattcctcaattatacattcaca
aacgtattgcgtctgcagaagttccttatgctctttgatcctgactccacggaaaattgt
gtattcatagtgccgacagtgaagcgagatggcggcaaggtgatcgactgggacttcctt
gagttaattgaacgaaatgcaagtatgatgccaactccagtgcccgaggagttacgtaaa
tccatagattttgatgctaacaagttcaaggatgccgtcgttatgccttggtatcgcaat
caagatcagccgcaatacttttacgtggccgagatttgtccgcagttatcaccgcaaagt
tgttttcctggcgaaaactaccgcacatttaagcattactatttcctcaaatacggctta
accatacagaatgtgaaacagccactgttggatgtggatcacacgagtgcgcgtttgaat
tttctaacgccgcgttatgtaaatcgaaaaggagttgccttgcccaccagctcggaagaa
acgaaacgtgccaaacgtgaaaacctcgaacaaaagcaaattcttgtgccggaactgtgc
accgtacatccatttccggcctcactgtggcgcactgctgtttgcttgccctgcattctg
taccgcataaacggattgctgttagcggatgacatacgcaagaaggtgtcgttggatata
gggctgggacagcaagaaattcccgacgactttgagtggccaatgctggactttggctgg
agtttgtcggaggtgctaaagcgatcaaaagaaaataatgcgtcgatggacaagaaaacg
gaagaacaaaaggaaaaggaggcaaataacaaacaaagtaacggttttgcgaaagatatt
ggtgtcaatggtgaattttgcgcagaagataatcaaactaaagcaaagagcgcaaacgaa
attattatagaaggcgaaaagaagttgaaggatagtaattttatagaaataggcacctgg
tccaacgacatggcgaatgatataaattttaataaatactcggactcattagacgacgat
gaggaggaatgtttgaaatattttccatcgaatgtcagtttttgcgaccagcagatgcgt
tatggctcgcccacgttctgggatgttaaggaatcccaactaaataaaaaaccggacgat
tgtgcgcaaagcaaaaacaccaccgatacgaacaattttcgcaaaaattcatttgcctat
tacgactccgacgactcattcgcatccagttacgatggtaatgagccaaccaactatagt
gaggatgacgatgatgagtgtggtcctttgcgtatagccttcacctctagaaatgaggct
gaaaccatcgaaaccgatcaggagatcgaaaagcgcaataaaaaactgtccatcattcaa
gcgaccaatgcaaatgagcgcaattatcagaaaaccaaaaacctgcttgtgggctataac
tttgaggacttaaaaccgaatatagaagcagaattgtgcgactccattgccaagttcact
gcatctactcgcctactgaaagcgaacattgaacagtccggtatgcttgtgaaatacaac
cagccagtgatgttggcacgtaaagagcgcaccacaaacgagtcggctgcacacggcgag
gcggcaactactgaagcgtttttgaaacttttgccctatgctgataaagatgtgctaatg
tctattttgagcaagcaggcaaatgtgctgaccattgccgatattgcgcgtttaaatgcc
gactatttgaaatcgcatccattggagctattcgaaattcaaggttgtggtgatattttt
gataatttcaatgataaggacatgttgaagttggagggttggggcgaaggatataagaag
ctgattaagttgaattttgagagaaaagcaagtgcaacaggctgcgttagcttaatagat
gtgaaaaaacaggagagtaaaaacatgcaaggcaatacgtttagcttcgaccgccaaccg
gatttggctggccacccaggacctagcccaagcatcattctgcaaggtttaacaatgtcg
aatgccaatgatggcatcaatttagaacgtctggagacgattggggactcatttctgaaa
tatgcgattaccacttatttgtatataacgtacgaaaacgtgcacgaaggcaagctaagt
catttgagatcgaaacaagtggccaacttgaatctatatcgactagggcgccgaaaaaag
ttgggcgaatatatgatagcgacgaaattcgagccgcacgacaattggttgccgccctgc
tactacgtgcccaaagagcttgagaaggaactgatcgaggcaaagataccgccgcatcac
tggaagctggtcgatttggctaacattaaaaagttgaacagcgccgagatatgcgcattg
gtgcgtgaaaaggccgacaaattgggactcttcggtgatgagtataattgcagcgaggat
gctagcgctgtcgatgaaatcgctgagggcaatgacttttcctgctttattccttacaat
cttgtgactcaacacagcattccagataaatcggttgccgattgtgttgaggcgttaatt
ggcgcgtatctcatcgaatgcggtccgcgtggcgctctgttgtttatggcgtggcttggc
atacgtgtgcttccgttcgtacgcaaaccatataatccacaagagccccgtataccgggt
agctctaatccggatgtgaatggtgaaataactgtatatggcgagtggacagcgccaaaa
agtccactgctccactattcgcccaacgccccacaggagctggagtccatgttagagggt
ttcgatgagtttgagaatacattgggttataaatttcgtgatcgttcctatttactgcaa
gccatgacccatgccagctactcgccaaatcgtttgacagattgctaccaacgcctagag
ttcctaggtgatgctgtgctggattatctgattactcgtcatctttacgaagatcccagg
caacactcgccgggtgcgttgaccgacttgcgctcggcgttagtaaataatactatattt
gcgtcactggccgtgcgacatggtttccacaaatattttcgacatctatcgcctgggtta
aatgaagtcatcgatcgttttgtacgcatacagaacgaaaacggtcacagcataagcgaa
gaatattatctactctcggaggaagagtgcgacgatgctgaagatgttgaagtgccaaaa
gctttgggtgatgtattcgagtcaattgcaggcgccatcttcctggactccaatatgtct
ttggacgttgtatggcaggtgtatagtaatatgatgaagccagagatagaacaatttagc
aactcagtgccaaaatcccctattagagaattgcttgaactggaaccggagaccgccaaa
tttggaaaacccgagaaactggctgatgggcgtcgggtgcgcgtcaccgttgacgtcttc
tgcaaaggcacattccgtggtattggccgtaactatcgtatagcgaagtgcacggcggct
aaatgcgcattacgtcaattaaagaagcaaggtttgataaagaaggactaa
DBGET
integrated database retrieval system
