Anastrepha obliqua (West Indian fruit fly): 129241188
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Entry
129241188 CDS
T09777
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129241188
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129241188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_2
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
129241188
NCBI-ProteinID:
XP_054733375
LinkDB
All DBs
Position
1:9580812..9618727
Genome browser
AA seq
2002 aa
AA seq
DB search
MTSRLDRLFILLESGSSAVTRRAAAKQIGEVQKLYPHELHALLNRLIGYLHSTSWDTRIA
ASQAVEAILQNVPAWKPELYAAIKRESIKKEKEGDNDSAVASITGGGGEEDSCQSVATNA
TTSSEHSSSRDVQQQQQRERLLSFAEFDLEQILHKGARLIGSEGIEFDMNEAEVVTTSST
GGNANANVTAAERLSRQRALLNEKLGLTQASKLGVNLMDMITDEDVMLTGTGNTYNANEE
KVPVEDILNIKPNSNLIPSNGQQLSCREMNRAKRKARQNVNTTTSSGGGVSASVNSLSRS
NSSTSSSTVTCKNGASMGDEPERKKLKTDALQRQEVFYTLNDPVPDATGMWVDAVNWPLE
NFCARLYVDLFNPRWEVRHGAATALRELINNHANGAGKVIGMSREEMHQHHNLWMEDAAL
RLLCVLCLDRFGDFVSDQVVAPVRETCAQVLGTIVKEMHAEQVHQIVKLLVKLLKQKEWE
VRHGGLLGLKYVFVVREDLLPVYVPQTINDILLALFDAVDDVGAVAASTLIPIATWLQKL
LNPVQVSSIVKMLWDLLLDQDELTSACNSFMGLLAAILCLPRAGFWIQMEPMSTLVPRLW
PFLSHSTSSVRKSTLQTLITLTNCNLNKEKIEDMTLAGPTTSTQFSTTANNNGNVDSVVN
QGTINAASSAIGINFDSKKLNLNLGVIDWQWKLLQDALRFIYERILVEPQADIQEMSTVV
WRNLLCNADLGALLHAACPVVSSWICLAMQPARLAFDSSILIHTSTIPHGASNSSADGNS
AVASRRRSQRNADDLGDNSLSSTVPQRYFLGGNEATPQDVRERNVVRARVTAARVLGALS
KYLVQPAPGVPYTPNMESPMDCYTKVLLGHLNSRSAVQRIVCGLVIAFWAQIDPSMRLAA
PKLAEKLCACAMEYVYYDEVAVSFTRLHQEAHDLIATLKQYKISINDFNNARVLTLDQIE
AIATTLTEGLNRYALKPKLLETLEERRRGLQNSFAQTSAEQCAYNISAQAALAGAIVCMR
CLPEKLNPVVKPLMESIKREECELLQQLSAEFLVQLMHQVCDRNPSPNSKILTNLCTLLK
SDPQFTPKITISPLTLKQTRLPESAAVSNSCVYYGILTLNLQQNNAQIGSSAGSRGGGGA
SASRGPGRPPLSEANAAAENGASAVSVAELKQNRIQRVGASCAIAKICLSFSMEIFSKIP
VFEQIVFAKIEHFTNAYPNMELLSAVPLDLAQTNDLMTSLQLIEISAPHFINFSSANLPK
EGVFNRLFDLLPHFSVLITHPLKAVRHMVARCIAALATADIMHTMHFVLDVLLGMLAEID
NVIKRQGAMESIERVVDKLQLRIVPYIVLLVVPLLGCMSDPDESVRLLSTHCFATLVQLM
PLDSRSKSIKNEIPSAELQQRKIRDRDFLDYLFTPKSIPDYKVPVPLSVELRSYQQAGVN
WLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHHKRAMEKSTSLPSLVICPPTLTGHWV
YEVEKFLEKSQVLRPLHYVGLPIGREKLRGQIGPCNLVVASYDTIRKDIDIFSMIHWNYC
VLDEGHIIKNGKTKSSKAIKMLKAKHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQF
IARYSRPILASRDSKSSSKEQEAGVLAMEALHRQVLPFLLRRVKEDVLTDLPPKITQDLL
CELSPLQERLYEDFSRTHLHSHWKDCLESIADSDSISKKAHIFHDLRYLQNVCNHPKLVL
TPKHSEYTKITQELQQQQSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQL
KAMLNIVEHDLLRKHLPTVSYLRLDGSVAASLRQDIVNNFNTDPSIDVLLLTTQVGGLGL
NLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITQKTLEEKIMGLQKFKIL
TANTVVSSENASMDTMGTGQLFDLFNANGNDKQGANGVPAAHGCSGGSMSMNAIIENLPE
LWSEQQYDEEYDVTNFVQGLKK
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgacatctcggttggatcgtctcttcatattgctcgagtctggctcatcagcggtaacg
cgtcgtgctgcagcgaaacaaattggggaagtgcagaaattataccctcacgaattgcat
gcactactcaatcgcttaatcggttacttgcacagcacctcgtgggatactcgaattgct
gcttcacaagccgtcgaggcgatattgcaaaatgtacccgcttggaagccggaattatat
gcggccataaagcgagagtccattaaaaaggagaaggagggggataatgactcggcggtg
gcttctattacgggtggtggcggtgaggaagatagttgtcagtcggtggccaccaatgct
acaacatccagcgagcacagtagtagtcgagatgttcagcaacagcagcagcgtgaacgt
ttgttatcgtttgcggaattcgatttggagcaaatattgcataaaggcgcacgtcttatc
ggttctgagggcattgaatttgacatgaatgaagcggaggtggtgacgacgtcttcgact
ggtggcaatgcaaatgcaaatgtcactgctgcagagcggttgagtcgacagcgagcgttg
ctcaatgagaaattgggcttgacgcaggcatccaagttaggtgtgaatttaatggatatg
ataaccgatgaagatgtaatgttgactggcaccggtaacacttacaacgccaacgaggag
aaggtgcccgttgaggatatactcaatatcaagcccaattcaaatctaattccttccaat
gggcaacagctaagttgccgcgaaatgaatcgtgccaagcgtaaagcgcgacaaaatgtg
aataccacaacgagcagcggtggtggtgtcagtgcgagcgtcaatagtctgagtcgtagc
aatagcagcaccagcagctctactgtaacctgcaaaaatggcgccagtatgggcgatgaa
ccggaacgcaaaaaattgaaaacagatgcgctgcagcgacaggaagttttctataccttg
aatgatcctgttccggatgccactggcatgtgggttgatgctgtcaattggcctttggaa
aatttttgtgcgcgcttatatgtcgatctcttcaatccccgatgggaagtacgccacggt
gcagcgacagcgttgcgtgagcttattaataatcacgccaatggtgctggcaaagtaatt
ggtatgagccgtgaagagatgcaccaacatcataatctctggatggaagatgctgcctta
cgacttttgtgtgtactctgcttggatcgtttcggtgacttcgtatccgatcaggtggtg
gcaccagtgcgtgaaacatgcgcccaggtgttgggcacaatcgtcaaggaaatgcatgca
gagcaagtgcatcagattgtcaagctattggtaaaattgctgaagcaaaaggaatgggag
gtgcgccatggcggcctcttgggcttgaagtatgtttttgtggtacgtgaggatctgttg
ccggtatatgtgccgcaaacaataaatgacatattgctggctttgttcgatgcggtggac
gatgtgggtgctgtggccgcttcgactctgataccaattgcaacgtggctacaaaaattg
ttgaatccagttcaggtgtcgtcgattgtgaagatgctgtgggatctgctgctagatcag
gacgagttgacgagcgcatgcaatagcttcatgggactattagcagctatattgtgtttg
ccgagagctggattttggatacaaatggaaccaatgtctacgctagtaccgcgactctgg
cctttcctctcgcatagcaccagttcggtgcgcaagtccactttacagacgctcataact
cttaccaactgtaacctgaataaggagaaaattgaagacatgacgcttgctggtcccacc
acaagcacacaatttagcacgaccgccaataataatggcaacgtggacagtgtggtaaac
caaggcacaataaatgctgcaagctctgcgattggcattaatttcgattcaaagaaattg
aacttgaatttaggcgtcatcgattggcagtggaaacttttgcaggacgccctacgcttt
atttacgaacgtattctagtcgaacctcaggcagatattcaggagatgtcaactgtagta
tggagaaatcttttgtgcaatgccgatttgggagcgctgttgcatgcggcttgtccggtc
gtgtcgtcgtggatatgtttagccatgcagcctgcacgactcgccttcgattcatccata
ttaatacacacttccactataccgcatggcgcatcaaactcatcagcggatggaaactct
gcagtagcatcacgtcgacggtcacaacgcaatgctgacgatttgggcgacaattcgctg
agtagtacagtaccccaaagatatttcctaggaggcaatgaggcaacaccacaggatgtg
cgtgagcgaaatgtggtgcgtgcgcgtgtaacggcagcacgagtgttgggcgcgctgtcc
aagtatctggtgcagccggcaccaggtgtgccatacacgccaaatatggagtcgcccatg
gattgctatacaaaagtgttgttggggcatttaaattcacgctcggcagtgcagcgaatt
gtgtgcggtctggtcattgccttctgggcgcaaatagatccctccatgcgcttagctgca
cccaagctggccgagaaattgtgcgcatgtgccatggagtatgtctactatgacgaggta
gccgtttcatttaccagactgcatcaggaggcgcatgatctcattgctacgttaaaacaa
tacaaaatatccataaacgacttcaacaatgcgcgcgttctcacattagatcaaatagag
gcgattgcaaccactctaaccgagggtcttaatcgctatgcgctaaaaccaaagttactc
gaaacactcgaggagcgcagacgtggcttgcagaactcttttgcgcagacctcggctgaa
caatgcgcctataatataagtgcacaagcggcattggccggtgccattgtgtgcatgcgc
tgcctgccggagaaactgaatccggtggtgaagccgctgatggagtcaataaaacgagag
gagtgtgagttgttgcagcaactttcagcggaattccttgtgcagctcatgcatcaagtg
tgtgatagaaatcctagtcccaatagtaaaatactgactaacttgtgtacgctgctgaag
agcgatcctcagtttacgccgaaaattaccataagtccattgacattgaaacagacacga
ttgcctgagtccgcggcagtgtcaaacagttgcgtatattatggcattttgactctaaat
ttacaacaaaataacgctcaaataggtagctcggcgggtagccgtggtggtggcggtgct
agtgcttctcgtgggccaggcaggccgccactgagtgaagcgaatgcggcagcagaaaat
ggcgccagcgctgtgagtgtggcggaattgaaacagaaccgtattcagcgcgtgggtgct
tcctgtgccatagcgaagatttgtttaagcttcagcatggaaatattttccaagataccg
gttttcgaacaaattgtatttgctaaaatcgaacatttcacaaacgcttatccaaatatg
gagctgttgtcggccgtgcccttagatttggcgcaaacgaatgacttaatgacatccttg
cagttgatcgaaatttcagcgccacattttataaacttttctagcgcaaatttaccaaag
gaaggtgtcttcaatcgcctgtttgacttgctgccgcatttcagtgtgcttatcactcat
ccattaaaggcggtccgtcatatggttgcgcgctgtattgccgcactcgccaccgctgac
ataatgcacactatgcactttgtgttggatgtactactcggcatgctggctgaaatcgac
aatgtgataaaacgtcagggcgccatggaatccatcgaacgcgttgtcgacaagctgcaa
ttgcgcattgtaccttatatagtgcttctagtcgtccccttgttgggttgtatgagcgat
cccgatgaatctgtacgtctgctttctacgcactgctttgccacactagtccaactgatg
ccgttagattcgcgtagcaagtcgatcaagaatgaaattccctccgctgagctgcaacag
cgcaagatacgcgatcgcgattttctggactatctcttcacgccaaagagtatacccgac
tataaagtgccagtgccactttcggtagagctacgctcgtaccaacaagctggcgtgaat
tggctgtggtttcttaataaatataatttgcacggcatactttgcgatgacatgggtttg
ggtaagactctgcagactatttgcatactagctggcgatcaccacaaacgggctatggaa
aaatccacatcactgccaagtctggtgatttgcccacctacgctcacaggtcattgggta
tatgaagtggaaaaattcctcgagaaatcacaagttttgcgtccattacattacgtcggt
ttaccaatcggacgcgaaaaattacgtggccaaattggtccatgtaatttggttgtggcc
tcatatgacacgatacggaaggatatcgatatcttcagcatgattcactggaactattgc
gtactggatgaaggtcacatcataaaaaacggcaaaacaaaaagctcgaaagccatcaag
atgctcaaagctaaacatcggctgatactttctggcacgcccattcaaaataacgtattg
gagctgtggtcactattcgactttttgatgcccggttttctcggcactgaaaaacaattt
attgctcgctacagtcgccctatattagcctcacgcgattcaaagagctcgtcaaaagaa
caggaggctggggttttggcaatggaggctttgcatcggcaagtattaccattcctgctg
cgtcgtgtcaaggaggatgtattgaccgatttaccaccgaaaatcacacaagatttgctg
tgcgagttaagcccgctgcaagaacgtttatacgaagactttagtcgcacacatttgcat
tcacattggaaggattgcttggagagcatagctgatagtgacagcatcagtaaaaaggca
cacatttttcatgatttgcgttacctacagaacgtttgcaatcacccgaaattggtgcta
acgccaaagcattcggaatacacaaagattacccaggaattgcagcaacaacagagttca
ctggacgatatagagcattcggctaagttgccagcactgaaacaactgctactcgactgc
ggcattggcgtccaaactgaatcggtcagtcaacatcgcgcactaattttctgtcaatta
aaagctatgctgaacatagtggaacatgatttgttgcgcaagcatttgccaactgtatcg
tatttgcgtttagatggcagcgtggcggcatcgctgcgccaggatattgtgaataacttt
aataccgatccaagcattgatgtgctgctacttacgacacaggttggtggtctcggtttg
aatttgactggcgctgatacagtaatatttgtggagcatgactggaatccaatgaaggat
cttcaagccatggaccgtgcacatcgcatcggccagaaaaaagtcgtcaatgtataccgg
ttgattacacaaaaaacgctcgaagaaaaaattatggggttgcaaaaattcaaaatactc
accgccaataccgttgttagttcggaaaacgcctcaatggacacaatgggtacgggacaa
ctattcgacttgttcaatgcaaatggcaacgataaacagggcgcaaacggtgtgccagca
gcgcatggttgcagtggtggatccatgtcaatgaatgcgatcatcgaaaatctgccagag
ctgtggtcggagcagcagtacgatgaggagtacgatgtgacgaatttcgtgcaaggttta
aagaagtaa
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