Anastrepha obliqua (West Indian fruit fly): 129241401
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Entry
129241401 CDS
T09777
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129241401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129241401
Spliceosome [BR:
aoq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129241401
Complex C
U5 SnRNP specific factors
129241401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
PRP1_N
HAT_PRP39_N
TPR_19
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_16
TPR_2
HAT_Syf1_CNRKL1_C
TPR_15
TPR_8
FAT
TPR_1
ARM_TT21_N
TPR_9
TPR_11
NatA_aux_su
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
129241401
NCBI-ProteinID:
XP_054733663
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All DBs
Position
3:complement(124872787..124876119)
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AA seq
931 aa
AA seq
DB search
MANITAAVIANRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPP
AAKRKKKEEEEEEDEDLNDSNYDEFSGYSGSLFSKDPYDKDDEEADQIYDSIDKRMDEKR
KEYRDRRMREDLERYRQERPKIQQQFSDLKRSLANVTAEEWSTIPEVGDSRNRKQRNPRA
EKFTPLPDSVLSRNLGGEAASTLDPSSGLASIVPGVATPGMLTPTGDLDLRKIGQARNTL
MNVKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPP
AWIASARLEEVTGKVQMARNLIMRGCEINPQSEDLWLEAARLQPPDTAKAVIAQAARHIP
TSVRIWIKAADLETETKAKRRVFRKALEHIPNSVRLWKAAVELENPDDARILLSRAVECC
NTSVELWLALARLETYENARKVLNKARESIPTDRQIWTTAAKLEEANGNKHMVDKIIDRS
LASLSANGVEINREHWFQEAIEAEKSGAVHCCQAIVKAVIGIGVEEEDRKQTWIDDAEFC
AKENAFECARAVYAHALQVFPSKKSIWLRAAYFEKSHGTRESLEALLQRAVAHCPKSEVL
WLMGAKSKWLAGDVPAARGILSLAFQANPNSEDIWLAAVKLESENSEYERARRLLAKARS
SAPTPRVMMKSARLEWALDNLPDALRLLDEAVKVFPDFPKLWMMKGQIEEQQNHLDEAAE
TYNQGIKRCPTSIPLWVLSATLEERKGTLTKARSILERGRLRNPRTAALWLAAIRVELRA
GLSEIASTMVARALQECPNSGELWAEAIFMESKPQRKTKSVDALKKCEHDPHVLLAVSKL
FWSEHKFTKCRDWFNRTVKIDPDLGDAWANFYKFELLHGTEEQQKEVLERCVAAEPKHGE
AWCSVSKHIKNWCFKTPEVLNGVVKQLSIPV
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatataactgcggcggttattgcaaatcgcaacaaaaaacattttcttggcgta
cctgcgccgcttggttatgttgctggtgttggtagaggcgccactggtttcactacccgt
tccgatattggtcctgcacgcgatgccaacgatgtgtctgatgaccgtcatgcaccgcct
gctgcaaagcgcaagaagaaagaagaagaggaggaggaagatgaagatttgaatgactca
aactacgatgaattcagcggttatagtggttcgcttttctcaaaagacccatacgacaag
gatgacgaggaagctgatcaaatttatgattcaattgataaacgcatggatgagaaacgt
aaggaatacagagaccgtcgaatgcgtgaagatttggagcgctatcgtcaagaaagacca
aaaatccaacaacagttttccgatcttaaacgttcgctggccaacgtcaccgctgaggaa
tggtcaactatacctgaagtaggtgacagtcgcaatcgcaagcaacgtaatccacgcgca
gagaaattcacaccgcttcctgatagtgtgctatcacgcaatcttggtggagaagctgcc
tccacactcgatccctcgtctggcctggcctcaatcgtaccaggtgtagccactcctggt
atgcttacaccgactggcgatttagatttacggaagatcggtcaggcccgtaatacgctc
atgaatgtaaagctttcacaagtatccgactctgtgacggggcaaactgttgtagatccg
aagggttatctcaccgacttgcaaagcatgatacccacatacggtggcgatattaatgat
attaagaaagcgcgcttactattgaaaagtgtgcgagaaactaatcctaaccatccgcca
gcttggattgcctcagcacgtttggaagaagtcactggcaaagtacaaatggcccgaaat
cttattatgcgtggctgcgagataaatcctcaatcggaagacttatggttagaggcagca
cgcttgcaaccgccagacacggctaaggctgtgatcgcacaagcggcacgtcacattcca
acgtcggtgcgtatatggattaaggccgccgatttagaaacggagacgaaggcgaagcga
cgtgtttttcgtaaggcgctagaacacattcccaactccgtgcgcctttggaaggccgct
gtggaattggaaaatcccgatgatgcgcgtattctactatcacgcgctgttgagtgttgc
aatactagcgtcgaattgtggctggcgctggcacgtttagaaacttacgagaatgcacgc
aaagtcttgaataaagcgcgtgaaagtatacctacagaccgccaaatttggacaaccgcc
gccaaacttgaagaagcaaatggtaataagcacatggtagataaaattattgaccgttca
ttggcttcactttcggccaatggcgtggagatcaatcgggagcattggttccaggaagcc
atcgaggccgaaaaatctggtgccgtgcattgctgccaagctatagtgaaagctgtaatt
ggtataggagttgaggaggaggatcgcaagcaaacatggatcgatgacgctgaattttgt
gctaaagagaatgcgttcgagtgtgcccgcgctgtctatgcgcatgcccttcaagtattt
ccctcaaagaagagtatttggttacgtgctgcttactttgagaaaagccatggcacacgt
gaatcgttggaggccttactccaacgcgctgttgcacattgccctaaatctgaggtactt
tggttaatgggcgccaaatccaagtggctcgctggtgatgttccggctgctcgtggcata
ctgtcattagcttttcaagccaaccccaattctgaggatatttggttagccgccgtaaag
cttgagtccgagaattctgaatacgaacgtgcgcgtcgtctactagcaaaggcgcgttcg
tcggcgccaacaccccgtgttatgatgaaatccgcgcggttggaatgggctttagacaat
ttgccagacgctttacgtctgcttgatgaggctgtcaaggtattccccgacttcccgaaa
ctgtggatgatgaaaggacagattgaagaacaacaaaaccatttagatgaagctgcggaa
acctacaatcaaggcattaagaggtgtccaacatctataccactttgggtgttatcagct
acactggaagaacgcaagggcactctaactaaagctcgttcaatattagagcgtggacgt
ttgcggaaccccagaactgcggcgttatggttggcagcgatacgggttgaactgcgtgcc
ggactgagtgaaattgccagcacaatggtggcacgtgctttacaggaatgccccaactct
ggagaattgtgggcggaggcgattttcatggaatcgaaaccgcagcgcaaaacgaaatca
gttgatgcgctcaaaaaatgtgaacacgacccgcatgtgcttttggctgtctcaaaattg
ttttggtccgaacataagttcacaaagtgccgtgattggtttaatcgtacggttaaaatt
gatcccgatcttggtgatgcttgggcgaatttttacaagtttgagctgctgcacggcacc
gaagagcagcagaaggaagttttagaacgttgtgtagccgcagaaccgaaacatggcgag
gcctggtgtagcgtgagcaaacacattaaaaattggtgcttcaagacgccggaggtttta
aatggcgttgttaaacaattatcaatacccgtataa
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