Anastrepha obliqua (West Indian fruit fly): 129241689
Help
Entry
129241689 CDS
T09777
Name
(RefSeq) THO complex subunit 6 isoform X1
KO
K13175
THO complex subunit 6
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03013
Nucleocytoplasmic transport
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129241689
09122 Translation
03013 Nucleocytoplasmic transport
129241689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129241689
03041 Spliceosome [BR:
aoq03041
]
129241689
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129241689
Spliceosome [BR:
aoq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129241689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
Beta-prop_TEP1_2nd
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
129241689
NCBI-ProteinID:
XP_054734131
LinkDB
All DBs
Position
3:21866712..21867906
Genome browser
AA seq
327 aa
AA seq
DB search
MKDLKLKVMYNNVISQAISESGRFLFAGNRFGDIFVQDLQDFEKTDAPRSKLRIFPQSGQ
TEINSLCCHRDFLIVGAIGVIYGLSWNEEKRDLSTVRKWEVKIPLDVDAVEVPDVNFLWL
RAETDTLYAGCGNNIIYQINLENGSIVRDYCGHTDYIHGVTGSDKGRLFSASEDGCVLFW
SEQQKEAIGRIEPAQNAQLMRPEYGKWIGAIATNEDWLICGGGPKFSIWHLGTMECMRDF
AFPGKVHVCDFVEENLFVAGEHSHAQFYAMNGDIQANIPLEHTAAYSVVWQLEPIKFMSI
AGYSNKLHILNDFRFLDTKVELYGNTE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttaaaattaaaggtcatgtataacaatgtgatatcacaagcgatctcagag
tctggccgatttctgtttgccggtaaccgttttggtgatatatttgttcaagatctccag
gatttcgaaaaaactgatgctcctcgatcgaagctacgcatttttccacaatctggacaa
acagaaatcaacagcctctgctgtcatcgtgatttcctaatcgtcggcgccattggcgtt
atttacggtctaagctggaacgaagaaaaacgtgatttgagcactgtacgcaaatgggaa
gttaaaattcctctcgacgttgatgctgttgaggtacccgatgtgaattttctgtggcta
cgcgccgagacggatactctatatgcaggttgcggcaataatattatttaccaaatcaat
ttggagaatggaagcattgtacgcgactactgcgggcacactgattacatacatggagta
acaggtagcgacaaaggccgcctcttttcagcttctgaagatggttgtgtgctcttttgg
agtgaacaacaaaaagaagcaattggaagaatagaaccagctcaaaacgcacaattaatg
cgacctgaatatggaaaatggataggcgcaattgctactaatgaggactggttgatttgc
ggtggcggaccaaagttttccatatggcatttgggtactatggagtgtatgcgggacttc
gcttttccaggtaaagtacatgtctgtgatttcgtggaggaaaacctatttgttgccggt
gagcatagccatgcacagttttatgcgatgaatggtgatatacaggcgaatataccgcta
gaacataccgcagcatactcagtagtgtggcaattggagccaatcaaatttatgtccatc
gcaggttacagtaacaagttgcatattttgaatgattttcgcttcttagacacaaaagtg
gagttatacggaaacactgagtaa
DBGET
integrated database retrieval system
