Anastrepha obliqua (West Indian fruit fly): 129241724
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Entry
129241724 CDS
T09777
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129241724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129241724
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129241724
BRITE hierarchy
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
129241724
NCBI-ProteinID:
XP_054734181
LinkDB
All DBs
Position
3:29660441..29662926
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AA seq
685 aa
AA seq
DB search
MSRHRIVRAMDYNDEYDNYDDVYGHSVDDDSCISPTDAQQWLYDRARGQHSMSAFIKNNK
DIQEEEEMSEEVVAHEKDRRDSDNFQLPVLNDVDQAKLTSCIDEVRNVVGDQVSERRIVE
TCINFDYDITKILDDILNNECDSKTKQHKPISEIRTSKKLSVQPTSSAAPKLITPDRETI
SSVQAPPTIKVTAQPLSERDIRRGFEVNSPQVQSSPVVSGRNTPVDEEVNKSITAAVKIS
KEQAQRDARKLYSQERGDQKAHFHMIVIGHVDAGKSTLMGHLLFDTGNVSQRVMHKHEQE
SKKMGKQSFMYAWVLDETGEERSRGITMDVGYSRIETDTKIVTLLDAPGHKDFIPNMISG
ATQADVALLVVDASRGEFEAGFEQGGQTREHALLVRSLGVNQLGVVINKLDMVDWSKDRF
DEIVGKLKTFLRQAGFKESDVTFIPCSGLSGENLAKPAMEPALKAWYKGPHLLHVIDNFK
LPVRSIERPFRMSVSDIYKGTGSGFCISGRIETGVLSSNDRVLVGASREQAQVKGIQIDE
LSQTNAFAGDQVSVTLSGVDMSTLSVGCIICDPQNPIPVTTRFQARILVFNVTVPITIGY
PVLLHHQCLIEPAVLSKLQAQLHKSTGEIIKKKPRVLGNNSCALVELETTRPICIERYAD
FKELGRFMLRVGGVTIAAGMVTKVR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccacagaattgtgcgagcgatggactataacgatgaatacgacaattacgat
gatgtatatgggcattccgttgacgatgacagctgcatttcaccgacagacgcccagcag
tggctatacgacagggcgcgtggccaacatagtatgtcagctttcattaaaaataacaaa
gacatccaagaagaggaagagatgagtgaagaagtcgtcgcccacgaaaaggatcgtcga
gattctgacaatttccaattgcctgtattaaacgacgttgatcaagcaaagcttacatcc
tgcattgatgaagttcgtaacgttgtgggcgatcaggtgtcagagcgaagaatcgtagag
acttgtattaactttgattatgatataaccaaaatactcgacgatatacttaacaacgaa
tgtgacagtaaaaccaagcagcacaaaccaataagcgagattagaacttcaaaaaaacta
tcagtccagccaacttcatcagccgctccaaaattaataacacctgatcgggaaacaatt
tctagcgtacaagcgccgccaacaataaaagtcactgcgcaaccattaagtgaacgggat
atacgtcgtgggtttgaagttaattcaccacaggtacaatcatcgccggtcgtgtcaggg
agaaatacgcctgttgacgaagaagttaacaaaagtataacagcagctgttaagatatcc
aaagaacaagcccagcgtgacgcacgaaaactatactcgcaggagcggggtgatcaaaaa
gctcattttcacatgattgttattggacatgtcgatgctggtaaaagcacattaatgggt
catttgttgtttgataccggcaacgtttcacaacgagtcatgcacaagcatgaacaagaa
tcaaagaaaatgggaaagcaaagcttcatgtatgcctgggtacttgacgaaaccggtgaa
gagcggtcaagaggtattaccatggatgttggatattcgcgtattgagaccgatacaaag
atagtaacactactagatgctccgggccacaaagatttcatacccaacatgatatcaggt
gctacacaagccgatgtcgcactgctggtggtagacgcatcgcgtggggaattcgaagcg
ggtttcgaacaaggcggacaaacgcgtgaacatgcattactcgtgcgttcattgggcgta
aatcaattgggagtggttatcaacaagttagatatggtcgactggtctaaagaccgattt
gatgaaattgtaggaaaactgaagacgtttcttaggcaagctggatttaaagaatcggat
gttacttttataccatgctcgggtctcagcggtgaaaatttagcgaaaccggcgatggag
cctgctttaaaagcttggtacaaaggacctcacttgctgcacgtcatagataattttaaa
ttaccagttagatcaattgaacgtccatttcgtatgtccgtgtcagatatttataaaggg
actggttctggcttttgtatatcaggccgcatcgagactggtgtacttagcagtaatgat
cgtgtgctggtcggtgctagccgcgagcaagctcaagtcaaaggcatacaaatcgacgaa
ttatcgcaaacaaatgcttttgcaggtgatcaggtgtcggtgacactatcaggagttgat
atgtctaccctgtctgttggttgcattatttgcgatccgcaaaatcccataccggtgaca
actcgttttcaagcacgtattcttgtattcaacgtgactgtgcccattactattggctat
cctgtgctattacatcatcagtgtctcatcgaaccggccgtactgagtaaattgcaagcg
caattgcataaaagcactggtgaaattataaaaaagaaaccacgagtcctcggcaataac
tcgtgcgctctagtagaattggaaacaacgcgtccaatctgcattgaacgatacgctgac
tttaaagagttaggacgtttcatgttgcgtgtgggtggcgtcaccattgcggcgggtatg
gttacgaaagtacgttaa
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