Anastrepha obliqua (West Indian fruit fly): 129241868
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Entry
129241868 CDS
T09777
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129241868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129241868
Spliceosome [BR:
aoq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
129241868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
PRP4
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_like
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
129241868
NCBI-ProteinID:
XP_054734387
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Position
3:complement(81959075..81961278)
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AA seq
540 aa
AA seq
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MSDDEDLQYVKRQRTLHYGSLEEVERKRQAAAIVSSGNPAAITCTSSGGVTNQLEDIDSD
EDYEEVKKPSAPSLPPTSGALANKIDDDYFDLETEVAKDKEALLKEFERKKRARQINVST
DDAEIKANLRQLNEPICYFGEGPAERRRRLKELLASLGENAIKQKQTEEEERKQLQKEQE
STWYHEGPEALRVARIWLADYSLPRAKERLEHARCQLDIPSATRAGRMVELQKRLHSLAP
QCSQVGDTRPVSGVAFSEDSKLLLTSSWSGLCKVWTVPDCKLLLTLRGHASYVGGVAFRP
GVSQEDGNVVTMASGGHDGAVKLWGFNSEESLADITGHMPHRVSKLAFHPSSRFLATACY
DSSWRLWDLEQKTEVLHQEGHAKSVHCLSFQTDGSVIVTGGLDSFGRVWDLRTGRCVMFL
EGHLGSIFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTMPAHTNLISDVKYQRDGGN
FLVTSSYDCSTKIWSNKTWQPLKTLLGHDGKIMAVDISPNSQHIVTASFDRTFKLWAPES
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgatgaggacctccaatatgttaaaaggcaacgaacgcttcattatggttca
cttgaggaagtagaaagaaagcgtcaagctgcagctattgtttcaagcggtaatcctgca
gcaataacttgtacttcaagtggtggagtaacgaatcaacttgaggatatcgactccgat
gaagattatgaagaagtaaagaaaccttccgcgccttccttgcctcctacatcgggtgca
ttggcaaataagatcgatgatgattatttcgacttggaaactgaagtagcaaaggacaag
gaagcgcttctcaaagaatttgaacgaaaaaagcgcgcacggcaaataaatgtttccaca
gacgacgctgaaataaaagccaacttgcggcaactcaatgaaccaatatgctattttggc
gaaggacctgctgagaggcgacgtcgattaaaagaattgttggctagcttgggagagaat
gcgatcaaacaaaagcagacggaagaagaagagcgaaagcaacttcagaaagaacaagag
tcaacatggtatcacgaaggacctgaagctttacgtgttgcaagaatttggcttgctgat
tattcattaccgcgagcaaaagagcgcctagagcatgcgcgctgccaactggatatacca
agtgcgactcgtgcaggacgcatggtggaacttcaaaagaggctgcattcacttgcaccg
caatgcagtcaagtgggcgacacacgtccagttagtggagtggcttttagtgaagattct
aaattgctccttacatcatcatggtcagggctatgcaaagtttggacagtaccagattgc
aagttattgctgacactgcgtggccacgccagttacgttggtggtgttgcatttcgaccc
ggggtgtcacaagaggatggtaatgttgtgacaatggcttctggaggacatgatggtgct
gttaaattgtggggcttcaattctgaagaatcgttagctgatataactggtcatatgccg
catcgtgtttctaagttagcatttcatccatcgagtcgatttctcgctacggcatgctat
gattcttcatggcgcctttgggatttagaacagaaaacagaagttttgcatcaagaaggg
catgccaaatccgtacattgtctgagcttccaaaccgatggcagtgttattgtaaccggt
ggacttgattcattcgggcgcgtgtgggatctcagaacaggtcgatgcgtaatgtttcta
gaaggccatttaggatctattttcggagtggatttttcacccaatggcttccatattgcc
acaggttctcaggataatacttgtaaaatttgggatttacgtcgacgccagcctgtttac
actatgcctgcgcatacaaatttaatatcggacgtgaaataccaacgtgatggtggtaat
tttcttgttacttcgtcttacgattgttctacaaaaatatggtcaaacaaaacatggcag
ccattaaaaacgttattaggacatgatggaaaaataatggccgtggacatctcgccgaat
tcgcaacatattgtaacggcttcattcgatcgtacctttaagctctgggctccggaaagc
tga
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