Anastrepha obliqua (West Indian fruit fly): 129241944
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Entry
129241944 CDS
T09777
Name
(RefSeq) collagen alpha-2(IX) chain-like
KO
K06823
collagen type XVIII alpha
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoq04147
]
129241944
00535 Proteoglycans [BR:
aoq00535
]
129241944
00536 Glycosaminoglycan binding proteins [BR:
aoq00536
]
129241944
Exosome [BR:
aoq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129241944
Proteoglycans [BR:
aoq00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
129241944
Glycosaminoglycan binding proteins [BR:
aoq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129241944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
129241944
NCBI-ProteinID:
XP_054734469
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Position
3:complement(45495185..45872643)
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AA seq
924 aa
AA seq
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MDEDIGSGFSPIESESGYNILEESFWNATDDASGFPLQTPPPYSHERPYRTIKGEKGERG
PKGPPGDSIRGPPGPPGPPGPKGESATFPAFVDFPTGPDAKYTGKCTCNASDILEAIKDN
DILRETIRGPPGLPGKEGKTGAPGLTGATGKPGERGAPGPKGDRGDRGDPGSRGPEGLQG
HKGEPGVDGMPGVQGPPGPPGPPGLPENYDESLMGNSMRPMRSSSPGPKGPPGDKGDGGT
PGERGQPGQKGERGDPGMTGEKGDRGHPGVHGPNGQKGEPGQPGVPGMAGAPGAPGLKGD
RGLPGELGPIGPPGPPGEVVYADNSLNGTNAAAGGQCQCPAGPPGPPGMRGPQGYEGPPG
LNGEPGPAGSNGLTGLPGSKGEKGEKGVRGLSGPKGDRGPEGPPGQAFFAGGYEGMAMNG
TKGEKGEKGMRGRRGKPGQAGQIGPPGKPGAMGDIGHSGRPGLLGPKGDMGMKGQKGETG
GREGPKGDKGDRGQDGRDGLPGPPGLPAAAGEGVQYIPMPGPPGPPGPPGQPGMPGLSIT
GPKGEPGMDSRSYYGDASYYGRPASGRSSLDEIKALRELQDLRDRPDSTSGPPGPPGPPG
PPSHSRHDDEETPYFSASSWNMRIVPGAVTFPNIDEMTKKSAMNPPGTLAYITEEEALLV
RVNKGWQYIALGTLVPIATPAPPTTVAPPVRVDIQSSNLLNNLPPLLNTPTFTTAPEYET
WYPRMLRVAALNEPYVGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDSIVRVA
DRDLPVVNTRGDVLFNSWKGIFNGQGGFFSQAPRIYSFSGKNVLTDPLWPQKLVWHGSLP
NGERSIDTYCDAWHSGSRDKFGYASNLLGNKLLDQERQTCDSKLIVLCVEALSQDRRRKR
DLSGSEPEFHTAEAYARHLKEVLT
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatattggctccggcttttcgcccattgaaagtgaatcgggctataatatt
ttggaagaatcattttggaatgcgacggacgatgccagtggatttccattacaaacaccg
cccccgtactcacacgaaagaccttatcgtacaattaaaggtgaaaagggtgaacgtgga
ccaaaaggaccacccggtgatagtatacggggtcctccgggacctccgggtccaccgggt
ccaaaaggtgaatcggcaacttttcccgccttcgttgattttcccaccggtcctgatgcg
aaatacactggcaaatgtacgtgcaatgcgtctgatatcctagaagcaatcaaagataac
gatatattacgtgaaacaatacgcggtccacctggtctgccaggtaaggagggaaaaact
ggtgcgcctggactcacgggtgctacagggaaaccaggtgaacgtggtgcccccggtccc
aaaggtgaccgcggcgataggggcgatcctggctcccgtggacccgagggtctgcaaggc
cataaaggcgagcctggcgtcgacggcatgcccggcgtgcagggaccacctggcccgccg
ggaccgcctggcttgcccgagaattacgatgaatctttaatgggcaattcaatgcgtccg
atgcgtagctcctcgcctggacccaaggggccacctggtgataaaggtgatggcggcaca
cctggcgaacgtggccaaccgggccagaaaggtgaacgcggggaccccggaatgactggc
gaaaaaggtgatagggggcatccaggcgtgcacggccctaacggtcaaaaaggggaacct
ggccaaccaggcgtaccgggcatggcaggtgcaccaggtgcacctggcctgaaaggggat
cggggtctacctggtgaattgggacccattgggccgcctggtccacccggtgaagtcgta
tatgcggataattctttgaacggtacaaatgctgcagcgggaggacagtgtcaatgtcca
gccggaccacctggtccgccgggaatgcgcggcccacaaggctatgaaggaccacccggt
ttgaacggcgagcctggtccagctgggtcgaacggtttgaccggcctgcctggctccaaa
ggtgagaagggcgaaaaaggtgtgcgaggcctgagcggcccgaaaggcgatcgcggaccc
gaaggaccgccagggcaggcctttttcgctggcggttacgaaggcatggctatgaatggc
accaagggcgaaaagggcgagaagggtatgcgcgggagacgcggcaaaccgggccaagct
ggacaaataggaccgccgggcaaaccaggtgcaatgggcgatatcgggcactcgggacga
cctggacttctaggccccaaaggtgatatgggcatgaaaggacagaaaggtgaaactggc
ggtcgagaaggcccaaaaggcgacaaaggggatcgaggtcaggatgggcgtgatggtcta
cctggtccgcctggactaccagcagcagccggtgaaggtgtacaatatataccaatgcct
ggaccaccaggaccgcctggtccacctggtcaaccaggcatgcccggtttgtctataacc
ggcccgaaaggtgagcctggtatggattcgcgcagttactacggcgatgcgtcttactat
ggacggccggcaagtggacgctcgtctcttgatgaaatcaaagctttgcgcgaactacaa
gacttaagagatcgtccagacagcacatctggtccacccggtccaccaggtccaccaggc
ccacccagccactcgcgtcatgacgatgaggaaacaccatatttttcagcatcatcatgg
aatatgcgaattgtacctggtgcggtgacattcccaaatatcgatgaaatgacaaagaaa
tcagcaatgaatccaccaggcacattggcctacatcacggaagaggaagcgctgctggtg
cgcgtcaacaagggttggcaatatattgcgcttggtactttggtgcccattgccacaccc
gccccaccgaccactgtcgcaccaccggttcgcgttgatatacaatcatcaaatctgcta
aacaatctgccgccgcttttaaatacgccaacgtttacaacagcgccagaatatgagacg
tggtatccacgcatgcttcgtgttgctgcactcaacgagccgtacgttggcgatctgcaa
ggcatacgaggcgctgattttgcctgttatcgtcaagggcgcagagccggtttactggga
accttcaaagctttcctgtcatccagagtgcaaaatcttgactcgattgtacgtgtcgct
gaccgcgatttgccggtggtcaataccagaggcgacgtccttttcaattcgtggaaaggc
atcttcaatggccaaggtggcttcttctcgcaggcgccgcgcatttacagttttagcggc
aaaaacgttctaacggatccattgtggccacaaaaactggtttggcacggctcactaccc
aacggtgagcgttcgattgacacatattgtgatgcctggcactcaggctccagggataag
ttcggttatgccagcaacttgctggggaacaaactgctcgaccaagagcgtcaaacttgc
gatagcaaactaattgtgctgtgcgtggaggcattgtcacaggatagaaggcgaaagcgc
gatctcagcggcagcgaaccagagttccatacggcggaagcatatgcgcgccacctgaag
gaagtgttaacttga
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