Anastrepha obliqua (West Indian fruit fly): 129242554
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Entry
129242554 CDS
T09777
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03018
RNA degradation
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129242554
09123 Folding, sorting and degradation
03018 RNA degradation
129242554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129242554
03041 Spliceosome [BR:
aoq03041
]
129242554
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129242554
mRNA degradation factors
5'-3' decay
Lsm complex
129242554
Spliceosome [BR:
aoq03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129242554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
129242554
NCBI-ProteinID:
XP_054735225
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All DBs
Position
3:1716941..1717392
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AA seq
96 aa
AA seq
DB search
MASGLEAYINHTVSIITADGRNFIGTLKGFDQTINVILDESHERVFSTTSGIEQIVLGLH
IIRGDNIAVIGLIDDQIDARLDLGNIRGEPLGPVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggcttggaagcctatataaatcatacagtgtctataataactgcggatgga
cgcaattttattggcacgcttaaaggattcgatcaaacaataaatgtgatactggacgag
tcccatgagcgagtcttttccacaacatcggggatcgaacagatagttctaggattacat
attatacgcggagataatatcgcagtgattggactaatcgatgatcagattgatgcacgt
cttgacttaggtaatattcgtggggagcctctaggtccagtagtacattag
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