Anastrepha obliqua (West Indian fruit fly): 129242609
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Entry
129242609 CDS
T09777
Name
(RefSeq) ATP-dependent helicase brm
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129242609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129242609
03036 Chromosome and associated proteins [BR:
aoq03036
]
129242609
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129242609
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
129242609
Chromatin remodeling factors
BAF complex
129242609
PBAF complex
129242609
GBAF(ncBAF) complex
129242609
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
Helicase_C
BRK
HSA
SnAC
Bromodomain
QLQ
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
129242609
NCBI-ProteinID:
XP_054735338
LinkDB
All DBs
Position
3:complement(104424393..104457245)
Genome browser
AA seq
1781 aa
AA seq
DB search
MTSPSPANSPMPPPQAPPAQSPSPSPHSPYQHQQMPQGPPGQQGPSGAGPSGPPHGPPQQ
SHMQAPPPHSQHGPIPTGGHHGPPPPPGHPGGPYTHPMQHAPPHGSPHGPPQHQQHGAMP
PGQHGVGQHGPPPPHGQVPPGQHGPPPPGSGGAPGSGPPMSHAPPPHGVPPPHGPPGPQQ
QPGVQGAPPPHMNGPPGQGPPGPPGPPPQGHHMPPHHQAMGPHMGMQMPPQGPNMPPMGY
QTHGMPPNGPPAPGQGPPPGDRPVQESLTALQRAIDTMEEKGLQEDPRYSQLLAIRATSK
HQHLTGNQVNMLRAQITAYRLLARNKPISMQMQQQLAPPQQQQQQQQQQQQQAGVPPGPP
GPPGQHPGVPVQQQPPGPSGAPPPCVPGNAGTPPQCPTPPASPYAQQQVPGGPKLQAPSL
PHVQQQPMAPGGVPPIPPQQDVTHQLPNGAGGKPNAGPPPPMMGGGQPPISSPMPATVAQ
GVRPGMPPGAPGLPPQAPPGMQAPKPGAPPPQQPMPKPNRVTTVAKPVGLDPITLLQERE
NRIASRISLRMQELQRLPATMPEDLRLQAAIELRALRVLNFQRQLRAEIVQCTRRDTTLE
TAVNIKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLAAVLQHGKDFKEYHR
NNKAQLARVNKAIMNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLA
FLLSQTDEYISNLTQMVKQHKDDQKKKKEEESKRLLQYKKELLMSGEYMNIDESCIAADM
RVTVVEQSTGTRLSGEEAPMLKNLHNWLERHPGWDWIESDSDDEGDSEMRDINSKEYIKS
KEEEEEKKSEEAESKEVANVEDAKDFIKKVKVEDDEYRTEEQTYYSIAHTVHEKVFEQAS
IMVNGQLKEYQLKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYL
IIVPLSTLPNWVLEFEKWAPSVGVVSYKGSPQGRRLLQNQMRATKFNVLLTTYEYVIKDK
AVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNF
LLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQ
LPDKVEYIIKCDMSGLQRVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCN
HPFMFQHIEEKYCDHTGAHSVASGPDLYRVSGKFELLDRILPKLKASNHRVLLFCQMTQC
MTIIEDYLSWRQFGYLRLDGTTKAEDRGELLRKFNAKDSDYFVFLLSTRAGGLGLNLQTA
DTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKV
IQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEVINMMIARSEEEIELFKKMD
IDRKKEDEELHPGRERLIDESELPDWLTKDDDEVERWHQYDEDTILGRGSRQRKEVDYTD
SLTEKEWLKAIDDGAEFEEEEDEDDAKRKRRKRKNRKDDSDEDELIMKRRRRQNIDKRLK
KQMNKIMSAVIKYTNDDGRVLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKYG
DINELEKDFVQLCQNAQIYNEEASLIYLDSIELQKVFASARARITAAAAAAASAAAAAGN
ESASGGGGGGGGGTAAGSEASDNEEEEVGDDGSDDEEIPTTSTAAVKMKLKLNKSLASAP
ATPTPAPPVPTSAATTSKKQTRRKRSQKKYAIFDDDDDDID
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgccctcaccggcgaatagtcctatgccgccaccccaggcaccgcctgcgcaa
agtccttcaccatcaccgcacagtccctatcaacatcaacaaatgccgcaaggtccaccg
ggacaacaaggtccgtctggcgcgggaccatctggaccaccgcatggcccgcctcaacaa
tcccatatgcaagccccaccaccacatagccaacacggccccataccgacgggtggtcat
catggtccaccaccaccaccgggtcatcccggcggaccgtatacgcatcctatgcaacac
gcaccgcctcatggttctccacatggaccaccacaacaccaacaacacggtgcaatgcca
ccgggacaacatggagtggggcaacacggcccaccaccccctcatggacaagtaccacct
ggtcagcatggaccaccgccgcctggtagtggtggtgcccctggaagtgggccaccaatg
tcacatgcacccccacctcatggtgtaccaccaccgcatggaccgccaggtccacaacag
caaccgggagtgcaaggagcgccaccgccgcatatgaatggaccaccggggcaagggcca
cccggtccacctggacctccaccacagggacatcacatgccgccacatcatcaagccatg
ggtccacatatggggatgcaaatgccaccacaagggccaaatatgccaccaatgggctat
caaacgcatggaatgccgccaaacggtccaccggctcccggccagggcccaccacctggc
gatcgtcccgtacaggaaagtctaaccgcacttcaacgcgctatcgacaccatggaggaa
aagggtctgcaagaggatccacgctactcgcaattactggctatacgcgccacatcgaag
catcaacatctcactggcaaccaagtgaatatgttacgcgcacaaattaccgcatatcga
ttgctggcgcgcaacaaacccatatccatgcaaatgcaacagcagttggcaccgccgcaa
cagcagcagcagcaacaacagcagcaacagcaacaggctggcgtaccgccaggtccaccc
ggaccgccgggacaacatcccggtgtgccagtacaacagcaaccgcccggaccaagtggc
gcaccgccgccatgtgtccctggcaatgcgggcacacccccgcagtgtcctacaccgcct
gccagtccttacgcacagcagcaggtgccgggcgggccgaagttgcaagcgccatcactg
ccccatgtgcagcagcaacccatggctcctggcggcgtgccgccaataccaccacaacaa
gacgtgacgcatcagttgcccaatggcgctggtggcaagccgaatgccggaccgccgcca
ccaatgatgggaggcggtcaaccgccaatttcatcaccaatgcccgccacagtagcgcag
ggtgtgcgcccgggtatgccgcccggcgctcccggtttgccaccacaggcgccacctggc
atgcaagcgcccaaaccaggtgcgccgccaccacagcagccaatgccgaaaccaaatcgc
gttacaacagtcgcgaagccagttggtttagatccgatcactttgctgcaggagcgtgaa
aatcgtatagcttcgcgtatttcattacgcatgcaagaattgcagcggttgcctgccact
atgccggaagacttgcgtctgcaagcggccattgagttgcgggcgctgcgcgtgctcaac
tttcaacgtcaactgcgtgctgagattgtacagtgcacgcgtcgcgacaccacgctggag
acggcggtgaatattaaagcgtataagcgtacaaaacgacaggggttacgtgaggcacgc
gccactgagaagctagagaagcaacagaaattagaggccgagcgcaagcggcgccagaag
catcaagagttcttggcagcagtgctgcaacatggcaaagatttcaaggagtatcaccgc
aataataaagcgcagctggcacgcgtcaataaggcaatcatgaatcatcacgccaatgcg
gagcgtgagcaaaagaaggagcaagagcgcatcgagaaggagcgtatgcgccgtttgatg
gccgaggatgaagagggctaccgcaaactgatcgatcagaagaaagataaacgtctggca
ttcctactttcgcagaccgatgaatatatcagtaatcttacacagatggttaagcagcac
aaagatgatcaaaagaagaagaaggaggaggaaagcaaacgtttgctgcaatacaagaag
gaactgctgatgagtggcgaatatatgaatatcgatgagagctgcattgcagcggacatg
cgcgtcactgtggtggagcaatctacgggcacgcgactctcgggcgaagaggcgccaatg
ctaaagaacttgcataactggttggagcgccatccgggctgggattggatagagtcggac
tcggatgatgagggtgattcagagatgcgcgatattaacagcaaggaatacattaaatct
aaggaggaggaagaagaaaaaaaatccgaagaagcagagagcaaagaggtggcaaatgtc
gaggatgctaaggactttatcaagaaagtaaaagttgaagatgatgaatatcgtaccgag
gagcagacctactacagcatcgcgcataccgtacacgaaaaagtattcgaacaagcatcc
attatggttaatggccaattgaaggagtatcagttgaagggcttggaatggctggtgtca
ttgtataacaacaacttaaatggtattttagccgacgagatgggtttgggtaaaactata
cagacaatttcgctggttacctatctgatggatcgaaagaaggtcatgggcccctatctc
attatcgtgccgctctcgacactgcccaattgggtgctggagttcgaaaagtgggcacct
tccgttggcgtggtcagttacaaaggcagcccacagggtcgccgtttgttgcagaatcaa
atgcgcgccaccaaattcaatgtactgctcacaacgtacgagtatgttatcaaggataag
gccgtgcttgctaaaattcagtggaagtatatgattattgacgaaggccaccgcatgaag
aatcatcactgcaagctaacacaggtgctgaacactcactatattgcaccgtatcgcttg
ctgctgactggcacaccgctacaaaataaattgcccgaattgtgggctctgctcaatttc
ttactaccatcgattttcaagtcgtgctccacttttgaacagtggtttaatgcacccttc
gctaccacaggcgagaaggtcgaattgaatgaggaagagacgattttgattattcgtcgt
ttgcacaaagtgttgcgtcccttcctattgcgtcgcctcaaaaaggaggtggaacaccaa
ttgcccgataaggtcgagtacatcatcaagtgcgatatgtctggactgcaacgtgtgctc
tacaagcatatgcagagcaagggtgtgctactcacggatggttcggagaagggcaaacaa
ggcaagggtggcgctaaggctttaatgaacaccatagtacagttgcgtaaactttgcaat
catccattcatgttccagcacattgaggaaaagtattgcgatcacactggcgcacatagt
gtcgcttccggaccggatctatatcgcgtatcgggcaaatttgaattacttgatcgcatt
ttgccgaagctgaaggcgagcaaccatcgcgtgctgctcttctgtcaaatgacacagtgc
atgactattatcgaggattatttgagctggcgccagtttggttatttgcgtttggacggt
accaccaaggcagaggatcgtggtgaattgctgcgtaaatttaatgcaaaagattccgac
tattttgtcttcttgctctcgacacgcgccggtggtttgggtctgaacttacaaacagcc
gatactgttgtcatcttcgattccgattggaatccgcatcaggatttgcaagcacaagat
cgtgcacatcgtatcggtcagcgcaatgaggtgcgcgtgttgcgtttgatgacggtgaat
tctgtggaggagcgcatcttagctgcggcgcgctacaagttgaacatggacgagaaagtc
attcaggctggtatgttcgatcagaaatctacgggaagtgagcgacaacaattcttgcaa
acgattttgcatcaggatgacaatgaagaggaggaagagaatgaagtgccggacgatgag
gtgattaatatgatgattgcgcgtagtgaggaagagatagaattgttcaaaaagatggat
attgatcggaagaaagaggacgaagaattgcatccgggtagggagcgtttaatcgatgag
tcagagttgccggattggttgacgaaggacgatgatgaggtggagcgttggcatcagtac
gatgaggataccattttgggtcgcggctcacgtcaacgcaaagaggtcgactacacagac
agcctgaccgagaaggaatggctaaaggccatcgatgatggcgccgaattcgaagaagag
gaagacgaagatgacgccaaacgtaagcgccgtaagcgtaaaaatcgtaaagatgattct
gatgaagatgagttgattatgaaacgtcgtcggcgccagaatattgacaagcgtttaaaa
aaacaaatgaataagattatgtctgcggtcattaagtataccaacgacgatggtcgtgta
ctctccgaaccgtttatgaagttaccatcacgtcaacgcctacccgactactatgaaatc
ataaaacgacctgtggatattaagaaaattttacaacgtattgaagattgcaaatatggc
gatatcaatgagctggagaaagactttgtgcagctctgtcagaatgcacaaatctacaat
gaggaagcttcactcatctatctagattcgattgaattgcagaaagtatttgcaagtgca
cgtgcacgcataactgccgccgcagcagctgctgcatcggctgcggctgccgctggcaat
gagtcggcaagtggtggtggaggcggtggagggggcggtacagctgctggctcagaggct
tctgacaatgaagaggaggaagtgggcgatgatggctcagatgatgaggaaattccaacc
acctctacggcggcagtgaaaatgaagttgaaattgaacaagtcattagctagcgcaccg
gcaacaccaacaccggcaccaccggtacccactagtgcggccactacttccaagaagcaa
acgcgccgtaagcgttcacagaagaaatacgcaattttcgatgatgatgacgatgacata
gattag
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integrated database retrieval system
