Anastrepha obliqua (West Indian fruit fly): 129242904
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Entry
129242904 CDS
T09777
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129242904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129242904
03012 Translation factors [BR:
aoq03012
]
129242904
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129242904
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129242904
Translation factors [BR:
aoq03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129242904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
nSTAND3
AAA_22
NPHP3_N
AAA_19
ResIII
SRP54
AAA_14
Rad17
ABC_tran
PhoH
FtsK_SpoIIIE
T2SSE
NB-ARC
ATPase
Motif
Other DBs
NCBI-GeneID:
129242904
NCBI-ProteinID:
XP_054735795
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All DBs
Position
3:69487337..69510606
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AA seq
937 aa
AA seq
DB search
MDRNDRERIRHPPGLRGRDIGLFYRNLSKRKRPRPDEPTIRLGPCVSVPQAVLARVEEKL
YRFAQSCEDEKVLKDFEAQFRHLLFADFEDFIVTSKSSSYELLDNEFQNQRYKSDALLKE
RDPQFQRRYEQRMNLPAMKQHDRILEAIKENQVLLIVGSTGCGKTTQVPQLILDDYIFNN
RGSQCHVVCTQPRRISAVTVAERVAYERCEHLGTSVGYQIRLESEMPRDSGSILYCTTGV
LLQKLQSDPLMNAVSIVIIDEIHERSVETDLLMALLKIILPHRPNLKIILMSATVSEEEF
SAYFNNCYTINIEGTMFPVKVNYLEDIIQETGFTRFHNNPHECNKNKARHRSKQSNRQST
NNLEYSAMIEPYLRQIKDKYDNQVLQSLRCTDSEGCENLQFLEHLIFYICDTKPPGAILV
FLPGYDNISKLNSVLLNPTLPIGQRYARKIQVYPLHSMMPTVFQKNVFQSPPPGIRKVIL
STTVAETSVTIDDVVYVINSGRMKTNNYNVEANLQTLEEAWVTKANTKQRKGRAGRVQPG
ICYNLFSRAREKTMLDQIVPEILRSKLESTILNMKMLHVKDVGYFFNTLISPPNQQAVTN
GINLLKRINALDVEGTLTPLGMHLARLPVDPPIGKMLVMGALFRCLDPITSVAAGLSFKS
PFFTPLGKEREVDRVKRHLSANQRSDHLLIDNVVLSYRESREDSSERDFCYKNFLNIGIL
QQLEDMKRQFASLLRASSFTDSSNCNAQSSNENSKNITLLRAIIAAGLYPNMAFLSKVRR
TKNHVNAIHHLCTPEERRVNFHPSSVNSHEASFDSHYFVYFQKQKSSSVYILDATMVFPM
ALIIFGDGVETGYTEKNIFYISVARTYFFKCDPATAKVVLELRKRLEWLMQKRALNPSPI
LPNSSEDYIIKAIQILLSLDDVYDYSDQYLSSDEEQQ
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaacgatagagaaagaatacgtcatccgcctggattacgtggtcgtgacatc
ggactattttaccgcaacttatcaaagcgaaagcgtccaagaccagacgagccaacaatt
agattgggaccttgcgtgagtgtcccgcaagctgtgctggcaagggttgaagagaaactc
tatcgtttcgcacaaagctgcgaagatgagaaagtgttgaaagactttgaagcacaattt
cgacatttgttattcgccgattttgaggatttcattgttacttcaaagtcatccagttat
gagctgctggataatgaatttcaaaatcaacgttacaaatccgatgctttgttaaaggaa
cgtgatccacagttccagagacgatacgagcaacgtatgaatttgccggcaatgaagcaa
catgatcgtatattagaagcgattaaagaaaatcaagtattactaattgttggtagtacg
ggttgtggtaagacaacacaagtgccacagctcattttggatgattacatctttaataat
cgtggctcacagtgtcatgtagtatgtacacaaccgcgtcgtatttcggcagtaacggtt
gctgagcgtgtagcttatgaaaggtgtgagcatttgggtacatcggtgggctatcaaatt
cgtttggaaagtgaaatgccgcgagatagtggctccattttgtattgcaccacaggcgtg
cttctgcaaaagttgcaatcagatccattgatgaatgccgtaagcattgttatcatagac
gagatacacgaacgcagtgtagagactgatttgctaatggctttattgaaaatcatattg
ccacatcgaccaaatctgaaaattattttaatgagtgctactgtgtcggaggaagaattt
agcgcttatttcaacaattgttatacgataaacattgaaggcacaatgtttccggttaag
gtgaactacctggaagatattatacaagaaaccggtttcacacgttttcacaataatccg
cacgagtgcaacaaaaataaggcacgacatcgctccaagcaatctaaccgccagagcact
aataatttggagtattcagcaatgatcgagccatatctgcggcagattaaagacaagtac
gataatcaggtactgcagtcattacgttgtaccgactcggaaggttgcgaaaatctacaa
tttttagagcatttaattttctatatttgtgatacaaagccaccgggggcgattttggtt
ttcttgccgggttacgataacatttctaaacttaattctgtactgctaaatcccacttta
ccgattggccagcgttacgcacgtaagatacaagtgtatccattacattcaatgatgcct
accgtgtttcaaaagaatgtttttcaatcaccgccacctggcattcgtaaggttatactc
tcaactacagtagcagaaacttcggtcacaattgatgatgttgtctatgtgatcaatagt
ggacgcatgaagacgaataattataatgtggaagccaatttgcaaacgcttgaagaagct
tgggttacaaaagccaatacgaaacaacgcaaaggacgtgctggtcgtgtgcaacctggt
atttgttataatctctttagtcgcgctcgtgaaaagacaatgctcgaccaaatagtgccc
gaaatattgcgtagtaaactggaatctaccatattaaatatgaaaatgttgcacgtgaaa
gatgtaggctatttttttaatacacttatttcgccacctaaccaacaagctgtcacaaat
ggcataaatttactaaaacgcatcaatgcgctagacgtggaaggtacattaacgcctttg
ggcatgcatttggcacgtttgccggttgatccgccaattggtaaaatgcttgtgatgggc
gcactctttcgttgtttggatcctatcacttcagtggcagcgggattgtcatttaagtcg
ccattttttacgccactcggcaaagagagagaagttgatcgtgtcaagcgtcatctctcg
gccaatcagagaagtgatcatttgttgatagacaatgttgtactcagttatcgtgaatcg
cgtgaggatagttctgagcgagatttttgctacaaaaactttttaaatattggcatacta
caacagttggaggatatgaaacgccaatttgctagtttgcttcgcgcatccagctttaca
gattcaagtaattgcaatgcccaatcgtctaatgagaattccaagaatattacattgtta
cgcgctataattgccgctggtctttatccaaatatggcatttttgagtaaagtacgtcgt
acaaagaatcacgtcaatgccatacatcatctttgcacaccagaggaacgacgagtcaat
ttccatccatcgtctgtgaatagccatgaagcttcatttgattctcactattttgtctat
tttcaaaagcagaagtcatcgagtgtttatattttagatgctaccatggtttttccgatg
gccctaatcatatttggtgatggcgttgaaacaggttatactgaaaaaaatatattttac
atttcagtggctcgcacgtacttctttaaatgcgatcccgccacagccaaagttgttttg
gaactgcgcaaacgtttggaatggcttatgcaaaagcgtgcactaaatccatcacccatc
ctgccaaatagcagcgaagattacatcatcaaagcaattcaaatactcttatcgttagat
gatgtgtacgattatagcgatcaatatctctcgtctgatgaagagcaacaataa
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