Anastrepha obliqua (West Indian fruit fly): 129242908
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Entry
129242908 CDS
T09777
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129242908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129242908
03009 Ribosome biogenesis [BR:
aoq03009
]
129242908
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129242908
Spliceosome [BR:
aoq03041
]
Complex A
U1 snRNP components
U1 related factors
129242908
Complex B
129242908
Ribosome biogenesis [BR:
aoq03009
]
Eukaryotic type
Pre-60S particles
Helicases
129242908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129242908
NCBI-ProteinID:
XP_054735808
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All DBs
Position
3:80985555..80993086
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AA seq
605 aa
AA seq
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MPQRRIGNRRENGRGGSGGGSAGVGNMRDGGRGRGGGGRGRDDGVRSGRIEKRYDDRGRR
GGGGGGGNGNNNDFAGLRNINWSDVRLPPFQKNFYQEHAKTRNRPLHEVERYRTAHQITV
RGPAPNPIQYFDEACFPDYCLNEIRRQRYTEPTAIQAQAWPIAMSGCNLVGIAKTGSGKT
LAFILPAIVHINNQPPLQRGEGPIALVLAPTRELAQQIQTVANDFGSSVYVRNTCIFGGA
PKGKQANDLERGVEIVIATPGRLLDFLAGSVTNLRRCTYLVLDEADRMLDMGFEPQIRKI
LGQIRPDRQILMWSATWPKEVRQLAEDFLGSYIQVNIGSLELSANHNIRQYVDVCNEHDK
GTKLKDLLSHIYDQSHAPGKIIIFVATKKKVDELSRFINGFGVRVGSIHGDKSQVDRDNV
LAEFRSGRSNILVATDVAARGLDVDGIKYVINFDFPQSSEDYIHRIGRTGRKHSTGTSYA
FFTRKNAKCARALIDILREANQNVNPELEYIARSAGTGGGRSRGGRGSGGGGGGHSMGSN
RRGGGGNAFSSGGMGGNSGSGYGNGYRGSAIMGANSSGGGGYSSGYSNGSLSASGPRSRD
YNSRH
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgccacaacgccgaattggaaatcgtcgagaaaatggtagaggtggtagtggaggcggt
agtgctggagttggcaatatgcgagatggtgggcgtggcagaggcggaggtggtagaggg
cgcgacgatggtgtgcgttctggacgtatagagaagcgctatgacgatcgtggtcgtcgg
ggtggtggtggaggtgggggcaacggtaacaacaatgattttgccggactacgcaacata
aactggtccgacgtacgcctgccgcctttccagaaaaacttttaccaagagcatgcaaaa
acgcgcaatcgcccactacacgaagtagaaaggtaccgcacagctcatcaaataacagtt
cgtggcccagcgcccaatcccatacaatacttcgacgaagcttgcttccccgactattgc
ctaaacgaaatcagacgtcagcgctatacagaaccaacggctatacaagcacaagcatgg
ccaatcgcaatgagcggatgcaatctcgtcggcatcgctaagacaggctctggcaaaact
cttgctttcattctccctgctatagtacacattaataatcaaccgccattgcaacgcggt
gaaggcccgattgcattggtcttggcaccaacgcgagaattagcacagcagatacaaacg
gtggcgaatgattttggttcgagtgtttacgttcgaaatacttgtatatttggtggtgct
ccgaaaggcaaacaagcaaacgatttggaacgtggtgtggaaattgtaattgcaactccc
ggacgattgttagattttttagctggtagtgttacaaatttacgccgttgtacctactta
gttttggatgaagctgaccgtatgctggatatgggatttgaaccacaaatacggaaaata
ctcggacaaatacgaccggatagacagattcttatgtggagcgccacttggccaaaagag
gtgcggcaattggctgaagattttctcggctcatatatacaggtaaacattggttcgttg
gagttatccgcaaatcacaatatacgccaatatgttgatgtttgcaacgaacatgataaa
ggcacaaagttaaaagatttgctctctcacatttatgatcagtcacatgctcctggtaaa
attattatatttgtagctacaaagaagaaagtggacgagttgtcacgatttatcaatggc
tttggtgtgcgagtgggttccatacatggcgataaatctcaagttgatcgtgacaatgtg
ttggccgaatttcgcagcggtcgctcaaacattctggtggccacagatgtcgcagcccgt
ggcttggatgtggatggtatcaagtatgttataaactttgactttccacaatcgtccgag
gattatatacatcgaatcggtcgcactggacgtaaacattccaccggaacgtcatatgca
tttttcacgcgcaagaatgccaagtgtgcgcgtgctttgatcgatatactgcgggaagcc
aatcaaaatgtgaatccagaattagagtacattgcgcgcagcgctggtacgggtggtgga
cgcagtcgcggcggtcgaggaagtggtggtggcggtggtggccacagcatgggatctaat
agacgcggtggtggtggtaatgcatttagctctggtggtatgggtggaaactctggttct
ggttatggtaatggctatcgtggtagtgcgattatgggagccaacagtagtggtggtggt
ggatatagtagtggttattcgaatggcagtctatccgccagcggcccgagatcgcgtgac
tacaactcccggcattaa
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